prot_L-elsbetiae_contig1003.77.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1003.77.1
Unique Nameprot_L-elsbetiae_contig1003.77.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length983
Homology
BLAST of mRNA_L-elsbetiae_contig1003.77.1 vs. uniprot
Match: A0A6H5KLD2_9PHAE (Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLD2_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 1.800e-54
Identity = 316/880 (35.91%), Postives = 371/880 (42.16%), Query Frame = 0
Query:  140 TFAVVFMTVALGITLAAPASSDADGSLVVCDKDTTAMTS---ATSKVRVGDRLVALGGTSADGLSVDRVQRLIVRGSRPLEMTFRRRRLTSDDGGTAAK-----------------QRRP----LGGLERPSRDCLLDTISNIATQEDSLLPDSQPQWPEQQQETQVGMVAGVSGRGRNENGGQGGDLSPPRNDMVRPSSPLXXXXXXXXXXLSPSRSSPTTGGGDGGGYLERQVPLASSPXXXXXXXXXEADLLSPSAAGTETHAAIXXXXXXXXXXXXXXXXXXXXXXXAAPGSRPVVLQAPEVAGRPEGPVDAPRVAALAAPAPSAQTSALTLGDSGGVAGRAEEPDPKRQKSGXXXXXXXXXXGCGSASTMAASDAVPARQLVGKGHGLDTTXXXXXXXXXXXXKAGLTGSXXXXXXXXXXXXXXXXXXXXXXXXSEREAAVQPISSSAGAPALVPTAAEVTRILAKLGARGISELTLYKNLTFDELVRVCRYTGGVDLSKRLPKATMAERLNSLCVEQGALALELQSSRAAAGAGARAEKGRGVARRARTVQGAGHLNLEDLSTPVRPSAAPTPPPRRGAPPSGTFPEALSVHFAASPPPLQRTPSHARGGAQAPPRSPLPSPLVQTSHTVSMATPQQXXXXXXXXPLPPRSGNSSATSRHFRTAALPTSTVVL---GDHGRGGAARAEDEDNWEDWDFLDNAG-------GRGRSEVLRRKRRGDEEGRXXXXXXXXXXXXXXXXXXXXXXEEAAWWSREPDHRDWSPCSSPTAAXXXXXPPSGSFLGSRFPPAERRNGEGEEGASR-RWNPLLPQG------------LSSLSASAGRQQQQQ-QGETAQSLCSGLFSGGGLGFTALPRWILR 971
            TF+VVFMT +LGITLAA  S D D SLVVCDK+ T   S   ATS +R+GDRLV++GGTS  G  V+RV+RLIVRG RPLE+ FRR R        AA                   RRP    LGGLE+ SRDCLLD IS IATQE SLL  SQ QWP+QQ       +          NGG                                 R    TGGGDG    E +  L +     XXXXXX     +PS A   TH +                           G+R +                                                           XXXXXXXXX     ST A +             G  T                                                   Q   +S  A  +VPT+ EVT IL KLG +G SEL LYKNL FDELV++CRYTG VDLSKRLPKATMAERL+SLC E+GALA+EL+++  A G  A +E+G G AR      G G      +   +     PTPP R          EA +V    +      TP   RG      R+P P  L +T      +      XXXXXX            S +    A+P    +    GD G  G    +D+  W DWD+ DNAG       GRG + V R  RR            XXXXXXXXXXXXXXXX   +W   EPDH +WSPCSSPTA XXXXX                     E GA+  R NPLLP              + +L+AS   Q QQ  +G T   L SGL SG GLGFTALPRWILR
Sbjct:  584 TFSVVFMTQSLGITLAA--SDDGDKSLVVCDKEDTTNPSTAEATSTIRIGDRLVSVGGTSTAGFGVNRVERLIVRGLRPLEVVFRRPRRHGPTASIAAAGTAXXXXXXXXTRRTPASRRPKHPALGGLEQRSRDCLLDMISGIATQESSLLLGSQRQWPQQQ----XXXIXXXXXXXXVANGGSATXXXXXXXXXXXXXQVPSPACGDFSACNDYDRGG--TGGGDGVTTAEEE--LNAKRPESXXXXXXXXXXXAPSTATPRTHQS---------------------------GARLITXX--------------------------------------------------------XXXXXXXXXXXXXVSTAAGNGVXXXXXXXXXXGGRGTGK-------------------------------------------------QANFASPSAAEVVPTSTEVTSILIKLGPKGASELALYKNLAFDELVKLCRYTGSVDLSKRLPKATMAERLSSLCSERGALAVELRNAGLAKGRKAESERGIGGAR-----GGKGEAPPRGVDRSLE--GPPTPPIRAT--------EAAAVAAETT------TPVQQRG------RAPRPGSLSRTPGPAGCSREASRQXXXXXXXX---------GSMNTPVLAIPHQASLFRQGGDTGDPG----DDQGCWADWDYPDNAGARLDRSGGRGGAGVGRGDRR------------XXXXXXXXXXXXXXXXXXXSW---EPDHCEWSPCSSPTAXXXXXXXXXXXXXXXXXXXXXXXXXGREAGAAVFRRNPLLPAASCFSRSFASSSPVGALAASEDEQHQQNHRGSTMSPLSSGLLSGAGLGFTALPRWILR 1266          
BLAST of mRNA_L-elsbetiae_contig1003.77.1 vs. uniprot
Match: D8LR57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR57_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 2.030e-33
Identity = 146/316 (46.20%), Postives = 175/316 (55.38%), Query Frame = 0
Query:  573 LVPTAAEVTRILAKLGARGISELTLYKNLTFDELVRVCRYTGGVDLSKRLPKATMAERLNSLCVEQGALALELQSSRAAAGAGARAEKGRGVARRARTVQGAGHLNLEDLSTPVRPSAAPTPPPRRGAPPSGTFPEALSVHFAASPPPLQRTPSHARGGAQAPPRSPLPSPLVQTSHTVSM---ATPQQXXXXXXXXPLPPRSGNSSATSRHFRTAALPTSTVVLGDHGRGGAARAEDEDNWEDWDFLDNAGGRGRSEVLRRKRRGDEEGRXXXXXXXXXXXXXXXXXXXXXXEEAAWWSREPDHRDWSPCSSPTA 885
            +VPTA+EVTRILAKLG +G SEL LYKNLTFDELV+VCRYTG +DLSKRLPKATMAERL+SLC E+GALA+EL+++  A+G  A  E+G G AR  +  Q A   +   L  P      PT P R          EA +   A +  P+Q+     RG      R P P  L +T         A+ QQ XXX       P S N+ A +   + +       + GD G  G    +D+  W DWD+ DNAG R          RG   G        XXXXXXXXXXXXXXX      SR PDHRDWSPCSSPTA
Sbjct:  192 VVPTASEVTRILAKLGPKGASELALYKNLTFDELVKVCRYTGVMDLSKRLPKATMAERLSSLCSERGALAVELRNAGRASGGKAEGERGIGGARGGKG-QAASRGDDRSLQGP------PTSPIRAT--------EAAAAAAAETTAPVQQ-----RG------RPPRPGSLTRTPGPAGCFGEASRQQPXXX-------PGSWNTPAVAAPHQASLFR----LGGDTGDPG----DDQGCWADWDYPDNAGAR--------LDRGGGRGGAGVGGRDXXXXXXXXXXXXXXXXXXXXXSRGPDHRDWSPCSSPTA 458          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1003.77.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLD2_9PHAE1.800e-5435.91Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D8LR57_ECTSI2.030e-3346.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainPROSITEPS50106PDZcoord: 150..224
score: 9.873
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 149..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1003contigL-elsbetiae_contig1003:12065..15838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1003.77.1mRNA_L-elsbetiae_contig1003.77.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1003 11785..15984 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1003.77.1 ID=prot_L-elsbetiae_contig1003.77.1|Name=mRNA_L-elsbetiae_contig1003.77.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=983bp
MPRIFLPAVTAKNNALLAGDTQVHSGDFEIQNSDDDTTCSDHDDAHDDSM
TDDESPDLLHPACQKRAQQPEVAGRPAAASTSVATSGKRARIEGRGTATE
CHMGEERRAKEQSTITSCTGASTRSKDNQGKAGEPKENDTFAVVFMTVAL
GITLAAPASSDADGSLVVCDKDTTAMTSATSKVRVGDRLVALGGTSADGL
SVDRVQRLIVRGSRPLEMTFRRRRLTSDDGGTAAKQRRPLGGLERPSRDC
LLDTISNIATQEDSLLPDSQPQWPEQQQETQVGMVAGVSGRGRNENGGQG
GDLSPPRNDMVRPSSPLSPPSPPLLPPLSPSRSSPTTGGGDGGGYLERQV
PLASSPASSSSSSSTEADLLSPSAAGTETHAAIAAAAPTAYTPSPPPSRE
NARAAAAAPGSRPVVLQAPEVAGRPEGPVDAPRVAALAAPAPSAQTSALT
LGDSGGVAGRAEEPDPKRQKSGKKKKKKKKKSGCGSASTMAASDAVPARQ
LVGKGHGLDTTTTTANTTNNGSSKAGLTGSSSSGGSGSGSGSGVGITGGG
GGGGSEREAAVQPISSSAGAPALVPTAAEVTRILAKLGARGISELTLYKN
LTFDELVRVCRYTGGVDLSKRLPKATMAERLNSLCVEQGALALELQSSRA
AAGAGARAEKGRGVARRARTVQGAGHLNLEDLSTPVRPSAAPTPPPRRGA
PPSGTFPEALSVHFAASPPPLQRTPSHARGGAQAPPRSPLPSPLVQTSHT
VSMATPQQQQQQQQQLPLPPRSGNSSATSRHFRTAALPTSTVVLGDHGRG
GAARAEDEDNWEDWDFLDNAGGRGRSEVLRRKRRGDEEGRGAAAAAGGTG
GGDHGYGDGDGDEEAAWWSREPDHRDWSPCSSPTAAAAAAAPPSGSFLGS
RFPPAERRNGEGEEGASRRWNPLLPQGLSSLSASAGRQQQQQQGETAQSL
CSGLFSGGGLGFTALPRWILRSVRTIGTQTIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036034PDZ_sf