mRNA_L-elsbetiae_contig1082.765.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1082.765.1
Unique NamemRNA_L-elsbetiae_contig1082.765.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1082.765.1 vs. uniprot
Match: A0A6H5JZ97_9PHAE (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ97_9PHAE)

HSP 1 Score: 405 bits (1042), Expect = 9.420e-135
Identity = 259/419 (61.81%), Postives = 283/419 (67.54%), Query Frame = 1
Query:    1 MTDIAQKFDEVLRNLAGQAGSLEALLGVFFSFLHRNTDFYVTFDPAKTAKAGMGFPSGKAEQLLLRAFRSFPYKPYSGGXXXXXXXXXXQQRQRSSGVGKPTGSSALSSRTTXXXXXXXXXXRSKQAPASVVDRSAGTSGQDAPVAKVKAAAETPTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGG------LRVRYTKDGKQVPIGNGGVTPRYYWTQTVNEATVYVDVPPGTRSKDVECVILPRRLKLRVRGAG-AETLLKAVAGGARKAAREGGALGEGSRGEGHDGGDLIFDGELPSTVSREDSMWSLNDGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLETAKGLPGSPFLPGGVFV*G 1236
            M ++ +KFD+VLRNLAGQAGSLEALLG FFSFLHRNTDFYVTFDP KTA+AGMGFP+GKAE+LLLRAFRSFPYK Y             Q  Q  +  G+  G S    + T           + +   + VD + G+ G                  XXXXXXXXXXXXX           XXXXXXXX     G       + VRYT+DGKQVPIGNGGVT RYYWTQTVNEATVYVDVPPGTRSKDV C+I PR LKL+VRGAG A                  GA             D++FDGELPS VSREDSMWSLNDG TVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTT+ISEYDGETQGAIRKIMFDQRQKSLGLPTSD+LNADA+LE AK LPGSPFLPGGV   G
Sbjct:    1 MAEVGRKFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYG-----------VQDEQLPAAAGRGRGPSTA--KETAATKIGPAGGSTSRKNDTGVDTALGSGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPGEGSVAPSSXXXXXXXXPTTANGKPAAAGCISVRYTEDGKQVPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVTCIIQPRWLKLKVRGAGTAXXXXXXXXXXXXXXXXXXGAE------------DVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEG 394          
BLAST of mRNA_L-elsbetiae_contig1082.765.1 vs. uniprot
Match: A0A7S2SV46_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV46_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.090e-77
Identity = 160/421 (38.00%), Postives = 210/421 (49.88%), Query Frame = 1
Query:    1 MTDIAQKFDEVLRNLAGQAGSLEALLGVFFSFLHRNTDFYVTFDPAKTAKAGMGFPSGKAEQLLLRAFRSFPYKPYSGGXXXXXXXXXXQQRQRSSGVGKPTGSSALSSRTTXXXXXXXXXXRSKQAPASVVDR-----------SAGTSGQDAPVAKVKAAAETPTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLRVRYTKDGKQVPIGNGGVTPRYYWTQTVNEATVYVDVPPGTRSKDVECVILPRRLKLRVRGAGAETLLKAVAGGARKAAREGGALGEGSRGEGHDGGDLIFDGELPSTVSREDSMWSLNDGT-----TVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLETAKGLPGSPFLP 1215
            MT    + DE+L +LA + G +E LLG FFSFLHR TDFYV +DP    +A MGFP+G +E++LLR FRSFP K Y+             + + + G+ +P G     S              S+    +               +   +G DA  ++   AA TP                                            V+YT  GKQVPIGNGGVT RY WTQT+ E TVY+ VP GTR+ D+ C I P++L+L+++                                     + I DG++P TV  ++SMW + D       TVVI+ +K  K+WW  VV GDP ID + VDST +I EYD ETQGAIRKIMFDQ+QKSLGLPTSD+L  +A+LE AK +PGSPFLP
Sbjct:    6 MTSFQDQSDELLMSLASKLGGIEPLLGTFFSFLHRKTDFYVQYDPKSVPQARMGFPAGVSEKMLLRKFRSFPTKDYAA---------EVARLEEAQGLRRPAGPKLRPSSEARRAAQKVPVAPSEPMEVAAXXXXXXXXXXXXXXARTVTGPDASSSQAGPAAGTPAPKMPFP------------------------------------EVKYTDKGKQVPIGNGGVTSRYTWTQTLYEVTVYIPVPQGTRAADILCTIAPKKLQLKLKKEP----------------------------------EWILDGDMPETVRPDESMWVVEDDPAGDFGTVVITLDKIKKTWWDVVVVGDPAIDATMVDSTCKIDEYDPETQGAIRKIMFDQKQKSLGLPTSDELTTEAILEKAKYMPGSPFLP 347          
BLAST of mRNA_L-elsbetiae_contig1082.765.1 vs. uniprot
Match: A0A7S3XL32_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL32_HETAK)

HSP 1 Score: 244 bits (622), Expect = 1.510e-72
Identity = 164/419 (39.14%), Postives = 212/419 (50.60%), Query Frame = 1
Query:   22 FDEVLRNLAGQAGSLEALLGVFFSFLHRNTDFYVTF-DPAKTAKAGMGFPSGKAEQLLLRAFRSFPYKPYSGGXXXXXXXXXXQQRQRSSGVGK----------------PTGSSALSSRTTXXXXXXXXXXRSKQAPASVVDRSAGTSGQDAPVAKVKAAAETPTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLRVRYTKDGKQVPIGNGGVTPRYYWTQTVNEATVYVDVPPGTRSKDVECVILPRRLKLRVRGAGAETLLKAVAGGARKAAREGGALGEGSRGEGHDGGDLIFDGELPSTVSREDSMWSLNDGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLETAKGLPGSPFLPGGVF 1227
            +D VL  LAGQ G ++ LL  FFSFLHR TDFYV   D    AK  MGF +G AE++LL++FR FPYKP    XXXXXXXXXX                           P   +A                +     A+    +AG   Q     +  A A  P +S                                      GL VRYT +G Q+PIGNGG+T  YYWTQT+ E T+YVD+P GTR+KD++  I P  +K++         LKA +                         + I +GE P T +  +SMW+L D  T+VI+ EK T++WW+SV++GDPEID  KVDSTT++ +YD ETQ  IRKIMFDQ+QK+LGLPTS++L    +LE AK   GSPFLPGG +
Sbjct:    9 YDNVLLGLAGQCGGIQPLLAAFFSFLHRKTDFYVVHADDDNQAK--MGFRAGAAEKILLQSFRKFPYKPMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPADKAAPVQHEPDDINDSQEQKKPDGPSAAAAHENAGDQLQ-----RGTAPAPVPASSGP------------------------------------GLEVRYTDEGLQIPIGNGGITENYYWTQTLGEVTLYVDIPAGTRAKDLQVEISPSSIKIK---------LKAES-------------------------EAIIEGEFPHTANASESMWTLEDNRTLVITLEKVTQTWWRSVIKGDPEIDAQKVDSTTKVEDYDEETQATIRKIMFDQKQKALGLPTSEELKMQGILEQAKYAKGSPFLPGGAY 350          
BLAST of mRNA_L-elsbetiae_contig1082.765.1 vs. uniprot
Match: A0A7S3H6E3_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6E3_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.240e-56
Identity = 149/404 (36.88%), Postives = 191/404 (47.28%), Query Frame = 1
Query:   16 QKFDEVLRNLAGQAGSLEALLGVFFSFLHRNTDFYVTFDPAKTAKAG--MGFPSGKAEQLLLRAFRSFPYKPYSGGXXXXXXXXXXQQRQRSSGVGKPTGSSALSSRTTXXXXXXXXXXRSKQAPASVVDRSAGTSGQDAPVAKVKAAAETPTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLRVRYTKDGKQVPIGNGGVTPRYYWTQTVNEATVYVDVPPGTRSKDVECVILPRRLKLRVRGAGAETLLKAVAGGARKAAREGGALGEGSRGEGHDGGDLIFDGELPSTVSREDSMWSLNDGTT-----VVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLETAKGLPGSP 1206
            Q FD++L ++A +AG ++ LL  FFSFL R TDFYV FD     KA   MGFP G AE+++L+AFR +  + Y                                                K+ PA++       S   A      AA  TP       XXXXXXXXXXXXXX                         YT DGKQ PIGNGG+   YYWTQT+ + TVY+D   G R KDV+C I  + LK+ +RG                                    +++ DG L   V  ++SMW+++  T      +VI+ EKT  +WWK V+ G  EIDT+KVDST  I EYD  TQ AIRKIMFDQ+QK LG PTS++   DA+L  A  +PGSP
Sbjct:   17 QAFDDMLTHIASKAGGIKPLLDTFFSFLERKTDFYVQFDQPAAGKASYKMGFPKGVAEKMVLQAFRQYKLQDYE-----------------------------------------TVMGNQKEQPATLPSPPQTPSKPTASEHLTPAAPSTPPKMSSGSXXXXXXXXXXXXXX---------------------XXXXYTPDGKQYPIGNGGIGENYYWTQTLRDVTVYIDTAAGCRGKDVKCDIKAQALKVAIRG------------------------------------EVVVDGALEGVVKTQESMWTISTTTDSAIQQIVITLEKTRPTWWKHVISGHEEIDTTKVDSTQNIGEYDDNTQAAIRKIMFDQKQKLLGQPTSEESAMDALLAKASLVPGSP 322          
BLAST of mRNA_L-elsbetiae_contig1082.765.1 vs. uniprot
Match: A0A833VXU8_PHYIN (CS domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833VXU8_PHYIN)

HSP 1 Score: 175 bits (443), Expect = 4.050e-47
Identity = 126/406 (31.03%), Postives = 181/406 (44.58%), Query Frame = 1
Query:    4 TDIAQKFDEVLRNLAGQAGSLEALLGVFFSFLHRNTDFYV-TFDPAKTAKAGMGFPSGKAEQLLLRAFRSFPYKPYSGGXXXXXXXXXXQQRQRSSGVGKPTGSSALSSRTTXXXXXXXXXXRSKQAPASVVDRSAGTSGQDAPVAKVKAAAETPTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLRVRYTKDGKQVPIGNGGVTPRYYWTQTVNEATVYVDVPPGTRSKDVECVILPRRLKLRVRGAGAETLLKAVAGGARKAAREGGALGEGSRGEGHDGGDLIFDGELPSTVSREDSMWSLNDGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSL-GLPTSDQLNADAVLETAKGLPGSPFLP 1215
            T++A +FD +L  +A Q G +E LL  FF FLHR TDFYV + DPAK   A MGF  G+A+Q +L AF+ +P K  SG                           A ++ +T          R++ A A+  ++                                                               ++ + T+DGKQVP+GNGGV   Y WTQT+ + ++ ++V  GTR+K + C I   +L++ ++       L+                                 GE    +  ++S+WSL    T+ IS EK   +WW S ++G PEIDTS+VDS   I EYD  TQGAIRK +FDQRQ+ L G+P + +   + +LE AK LPGSPFLP
Sbjct:    8 TNMADRFDALLAQMAQQHGGVEPLLESFFGFLHRKTDFYVVSSDPAK---AKMGFLPGQAQQKVLAAFQKYPMKNLSGN--------------------------AEAATSTVLSASKTDSTRNRSASAAAKEK---------------------------------------------------------------IKPQLTEDGKQVPVGNGGVADNYTWTQTLEDVSIQMEVAQGTRAKALNCQIEATKLRVSLKSDPTRPFLE---------------------------------GEFFDKIRADESIWSLEGNHTLNISLEKIKPTWWASALKGGPEIDTSQVDSRRNIQEYDDVTQGAIRKAVFDQRQQQLNGVPLTPE---EQMLEEAKSLPGSPFLP 285          
BLAST of mRNA_L-elsbetiae_contig1082.765.1 vs. uniprot
Match: A0A2D4C6K1_PYTIN (CS domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6K1_PYTIN)

HSP 1 Score: 173 bits (439), Expect = 2.640e-46
Identity = 89/203 (43.84%), Postives = 121/203 (59.61%), Query Frame = 1
Query:  598 VRYTKDGKQVPIGNGGVTPRYYWTQTVNEATVYVDVPPGTRSKDVECVILPRRLKLRVRGAGAETLLKAVAGGARKAAREGGALGEGSRGEGHDGGDLIFDGELPSTVSREDSMWSLNDGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLETAKGLPGSP 1206
            V+ T  GKQ+PIGNGG+T +Y WTQT+ + TV V VP GT +K +EC I P+RL++ VR +   +                                ++ DGE P  +  ++S+WSL +G T+ +S EK  ++WW SV+ GD EIDTS+VDST  I EYD  TQGAIRK MFDQ+Q+ LGLPTS++L    +L  A+  P SP
Sbjct:  133 VKLTDKGKQLPIGNGGITDKYTWTQTLEDVTVLVPVPEGTSAKQIECDIRPQRLRVAVRSSSTHSTKNPSV--------------------------VLLDGEFPEKIRADESLWSLENGHTLELSLEKIRQTWWASVLRGDAEIDTSEVDSTRAIGEYDAATQGAIRKAMFDQQQRQLGLPTSEELATQELLAKARLAPNSP 309          
BLAST of mRNA_L-elsbetiae_contig1082.765.1 vs. uniprot
Match: A0A835Z5P8_9STRA (Nuclear migration protein nudC-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P8_9STRA)

HSP 1 Score: 171 bits (434), Expect = 4.680e-46
Identity = 94/205 (45.85%), Postives = 122/205 (59.51%), Query Frame = 1
Query:  619 KQVPIGNGGVTPR--YYWTQTVNEATVYVDVPPGTRSKDVECVILPRRLKLRVRGAGAETLLKAVAGGARKAAREGGALGEGSRGEGHDGGDLIFDGELPST-VSREDSMWSLN-DGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLETAKGLPGSPFLPGG 1221
            KQ P+GNGG  P   Y WTQT+ E TVYVDVP GTR +D+ C I  R L  +++GAG +   K                                  E+P T ++   S+W+L+ D   +V++ EK  K+WW   +EG PEIDTSKVDST ++ +YD +TQ AIRKIMFDQ+QK +GLPTSD+L A  +LE AK  PGSPF+PGG
Sbjct:   89 KQTPVGNGGACPDHGYCWTQTLQEVTVYVDVPKGTRGRDMVCDIGTRSLSCKLKGAGGQQASK----------------------------------EIPFTALAARRSLWNLDSDDGVLVVTLEKVAKTWWACALEGHPEIDTSKVDSTCKVGDYDEDTQAAIRKIMFDQKQKRMGLPTSDELTASDLLEKAKLAPGSPFMPGG 259          
BLAST of mRNA_L-elsbetiae_contig1082.765.1 vs. uniprot
Match: A0A7R9U371_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U371_9STRA)

HSP 1 Score: 173 bits (439), Expect = 5.920e-46
Identity = 89/211 (42.18%), Postives = 128/211 (60.66%), Query Frame = 1
Query:  598 VRYTKDGKQVPIGNGGVTPRYYWTQTVNEATVYVDVPPGTRSKDVECVILPRRLKLRVRGAGAETLLKAVAGGARKAAREGGALGEGSRGEGHDGGDLIFDGELPSTVSREDSMWSLNDGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLETAKGLPGSPFLPGGVFV 1230
            ++  +DGKQ+P+ NGG T +Y W+QT+ EAT++V +P G R++D+   ILP  L +R                  K A +                D+I  G+ P  +  ++S+W++++G  + IS +K  ++WW S + GD EIDT++VDS T+I +YD ETQG IRKIMFDQ+QK+LGLPTSD+L    + E AK  PGSPFLPGG F 
Sbjct:  162 LKVNEDGKQIPVNNGGATDKYVWSQTLGEATMHVPLPEGMRARDIRVEILPSGLTVR------------------KKADD----------------DVILAGQWPRRIQGDESVWTVDNGI-LTISLDKADRAWWSSALVGDVEIDTTQVDSRTKIDDYDDETQGVIRKIMFDQKQKALGLPTSDELEKQELFERAKFAPGSPFLPGGPFA 337          
BLAST of mRNA_L-elsbetiae_contig1082.765.1 vs. uniprot
Match: A0A6S8EVI0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EVI0_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.460e-43
Identity = 89/207 (43.00%), Postives = 114/207 (55.07%), Query Frame = 1
Query:  601 RYTKDGKQVPIGNGGVTPRYYWTQTVNEATVYVDVPPGTRSKDVECVILPRRLKLRVRGAGAETLLKAVAGGARKAAREGGALGEGSRGEGHDGGDLIFDGELPST--VSREDSMWSLNDG-TTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLETAKGLPGSPFL 1212
            RY KDGKQVP GNGG    YYW Q++ E T+YV VPPGT SKD+ C I P  +++ V+G                                     LI +G  P    V+  +  WS  +   T+ IS +K  ++WW SVV+G+PEIDT  VDS  ++ EYD ETQ  IR+IMFDQ QK  GLPTS ++  + VLE AK + GSPFL
Sbjct:   71 RYNKDGKQVPEGNGGKGENYYWQQSLYEITIYVQVPPGTNSKDIVCEIDPGTIRVGVKGKS-----------------------------------LILEGNYPENYKVNTGECFWSFEEAENTITISLDKREQTWWPSVVQGEPEIDTQNVDSKRKVDEYDDETQATIRRIMFDQNQKRKGLPTSGEITTNGVLEKAKYIKGSPFL 242          
BLAST of mRNA_L-elsbetiae_contig1082.765.1 vs. uniprot
Match: A0A7S0NWJ9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NWJ9_9EUKA)

HSP 1 Score: 167 bits (424), Expect = 1.750e-43
Identity = 139/401 (34.66%), Postives = 184/401 (45.89%), Query Frame = 1
Query:   16 QKFDEVLRNLAGQAGSLEALLGVFFSFLHRNTDFYVTFDPAKTAKAGMGFPSGKAEQLLLRAFRSFPYKPYSGGXXXXXXXXXXQQRQRSSGVGKPTGSSALSSRTTXXXXXXXXXXRSKQAPASVVDRSAGTSGQDAPVAKVKAAAETPTTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLRVRYTKDGKQVPIGNGGVTPRYYWTQTVNEATVYVDVPPGTRSKDVECVILPRRLKLRVRGAGAETLLKAVAGGARKAAREGGALGEGSRGEGHDGGDLIFDGELPSTVSREDSMWSLND---GTTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLETAKGLPGSPF 1209
            +KFD VL  +AGQ G ++ LL VFFSFL+R TDF+V  +P   AK  MGF  G AEQL+L+ F +  YK ++            QQ+                    XXXXXXXXXX     PA+     A T+            AETP  +                                        R++  +D     + NGG T +Y W QT+++ T+ V VP GTR++DV CVI   +L L++RG     +       AR                           E+   V  ++  WSL     G  V +  EK  ++WWKS + GD EIDT++VDS+  + EYDGETQGAIRKIMFDQ QK  GLPTSD+L  + +L  A    GSPF
Sbjct:    3 EKFDGVLMEVAGQCGGIQPLLDVFFSFLYRKTDFFVVMEPGTEAK--MGFADGVAEQLVLKVFHT--YKKHADSTRSKLKKQPQQQQPP----------------XXXXXXXXXXXXXXXXPPAATASVGAATASGT--------RAETPNEAGTGEGGMASEQSGVAAAPVAAPSTEPPASQS---------RIKEIQD-----VYNGGKTSKYTWEQTLHDVTLQVPVPAGTRARDVVCVITKTKLSLKIRGHEEALIDTCYPCDARNGQ------------------------EIWEKVRADECTWSLEQSSAGPQVSVYLEKEREAWWKSALHGDNEIDTTQVDSSRSMYEYDGETQGAIRKIMFDQDQKRKGLPTSDELKNEDLLRQAWDAEGSPF 337          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1082.765.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ97_9PHAE9.420e-13561.81CS domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2SV46_9STRA1.090e-7738.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3XL32_HETAK1.510e-7239.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3H6E3_9STRA1.240e-5636.88Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A833VXU8_PHYIN4.050e-4731.03CS domain-containing protein n=2 Tax=Phytophthora ... [more]
A0A2D4C6K1_PYTIN2.640e-4643.84CS domain-containing protein n=2 Tax=Pythium insid... [more]
A0A835Z5P8_9STRA4.680e-4645.85Nuclear migration protein nudC-like protein n=1 Ta... [more]
A0A7R9U371_9STRA5.920e-4642.18Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A6S8EVI0_9STRA1.460e-4343.00Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S0NWJ9_9EUKA1.750e-4334.66Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1082contigL-elsbetiae_contig1082:13640..16051 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score423.3
Seed ortholog evalue1.3e-115
Seed eggNOG ortholog2880.D8LL35
Preferred nameNUDCD3
KEGG koko:K21867
KEGG TC1.A.1.4
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005856,GO:0005868,GO:0005875,GO:0006457,GO:0006810,GO:0006996,GO:0007097,GO:0008104,GO:0008150,GO:0009987,GO:0012505,GO:0015630,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030286,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044380,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044782,GO:0046907,GO:0051082,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051647,GO:0051649,GO:0051656,GO:0060271,GO:0070727,GO:0070925,GO:0071539,GO:0071840,GO:0072698,GO:0120031,GO:0120036,GO:1902494,GO:1905508,GO:1905793
EggNOG free text desc.unfolded protein binding
EggNOG OGsKOG2265@1,KOG2265@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Ec32 ortholog descriptionHSP20-like chaperone
Ec32 orthologEc-26_003380.1
Exons2
Model size1571
Cds size1233
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1082.765.1prot_L-elsbetiae_contig1082.765.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1082 13978..16051 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815301.3837256-UTR-L-elsbetiae_contig1082:13639..139771622815301.3837256-UTR-L-elsbetiae_contig1082:13639..13977Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1082 13640..13977 -
1691682825.8519301-UTR-L-elsbetiae_contig1082:13639..139771691682825.8519301-UTR-L-elsbetiae_contig1082:13639..13977Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1082 13640..13977 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815301.3942997-CDS-L-elsbetiae_contig1082:13977..141661622815301.3942997-CDS-L-elsbetiae_contig1082:13977..14166Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1082 13978..14166 -
1691682825.873378-CDS-L-elsbetiae_contig1082:13977..141661691682825.873378-CDS-L-elsbetiae_contig1082:13977..14166Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1082 13978..14166 -
1622815301.4057124-CDS-L-elsbetiae_contig1082:15007..160511622815301.4057124-CDS-L-elsbetiae_contig1082:15007..16051Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1082 15008..16051 -
1691682825.8832307-CDS-L-elsbetiae_contig1082:15007..160511691682825.8832307-CDS-L-elsbetiae_contig1082:15007..16051Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1082 15008..16051 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1082.765.1

>prot_L-elsbetiae_contig1082.765.1 ID=prot_L-elsbetiae_contig1082.765.1|Name=mRNA_L-elsbetiae_contig1082.765.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=411bp
MTDIAQKFDEVLRNLAGQAGSLEALLGVFFSFLHRNTDFYVTFDPAKTAK
AGMGFPSGKAEQLLLRAFRSFPYKPYSGGGGGGGGDGGKQQRQRSSGVGK
PTGSSALSSRTTATASSSGSTSRSKQAPASVVDRSAGTSGQDAPVAKVKA
AAETPTTSASASPPAPPARAPGEDAAAPPSSAQPNRTAAAAAAAAGGLRV
RYTKDGKQVPIGNGGVTPRYYWTQTVNEATVYVDVPPGTRSKDVECVILP
RRLKLRVRGAGAETLLKAVAGGARKAAREGGALGEGSRGEGHDGGDLIFD
GELPSTVSREDSMWSLNDGTTVVISFEKTTKSWWKSVVEGDPEIDTSKVD
STTRISEYDGETQGAIRKIMFDQRQKSLGLPTSDQLNADAVLETAKGLPG
SPFLPGGVFV*
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mRNA from alignment at L-elsbetiae_contig1082:13640..16051-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1082.765.1 ID=mRNA_L-elsbetiae_contig1082.765.1|Name=mRNA_L-elsbetiae_contig1082.765.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2412bp|location=Sequence derived from alignment at L-elsbetiae_contig1082:13640..16051- (Laminarionema elsbetiae ELsaHSoW15)
ATGACGGACATAGCGCAGAAATTCGACGAGGTGCTGAGGAACCTCGCGGG GCAGGCCGGATCCCTGGAGGCCCTGCTTGGGGTGTTCTTCTCCTTCCTCC ACCGCAACACCGATTTCTACGTCACCTTCGATCCAGCGAAGACAGCCAAG GCAGGCATGGGTTTTCCGTCCGGGAAAGCGGAGCAGCTCCTGCTCCGCGC CTTCCGATCCTTCCCGTACAAGCCATACAGTGGTGGTGGGGGCGGTGGCG GCGGCGACGGCGGCAAGCAGCAGCGGCAACGGTCGTCGGGGGTGGGGAAG CCAACGGGATCATCGGCCCTGTCGTCACGAACCACAGCGACCGCATCCTC CAGCGGCTCGACATCGCGCAGCAAGCAGGCGCCGGCCTCTGTTGTTGACC GAAGTGCTGGCACCTCTGGGCAAGACGCTCCCGTGGCCAAAGTAAAAGCG GCAGCAGAAACGCCCACAACCTCTGCTTCGGCATCACCTCCAGCGCCACC AGCACGCGCTCCCGGAGAAGACGCAGCTGCCCCTCCCTCCTCTGCCCAAC CCAATCGGACAGCGGCGGCGGCGGCGGCGGCGGCGGGGGGCCTGCGCGTG CGCTACACGAAGGACGGAAAGCAGGTGCCGATCGGCAACGGGGGCGTGAC CCCCAGATACTACTGGACGCAGACGGTGAATGAGGCAACGGTCTACGTCG ACGTACCTCCGGGCACTCGCTCAAAGGACGTAGAATGCGTAATCCTGCCT CGACGTTTGAAGCTCAGGGTTAGAGGGGCGGGAGCAGAAACCCTGCTGAA GGCGGTGGCCGGGGGCGCACGCAAAGCAGCGAGGGAAGGGGGCGCGCTTG GCGAGGGCAGCAGAGGGGAGGGGCACGATGGTGGAGACTTGATTTTTGAT GGTGAGTTGCCGAGCACGGTTTCGCGGGAGGATAGCATGTGGAGCCTGAA TGACGGGACGACGGTGGTGATCTCGTTCGAGAAGACGACCAAGTCGTGGT GGAAGAGCGTCGTCGAAGGGGACCCGGAGATAGATACCTCGAAGGTGAGC ATGTTTGGAAAGGGTTTTACAAAAGGTTGCGTGTAGGTACAATAGTGAAA AATTGGCAATTCAAGCAGGGTTCACCTACAGTCGTAGTGAAGTAAGGCGC TGGTGCCTGGCCCTCTTGATCGCTATTGTACATATTGCCATACTTCTGGA TGTGCTGTAGTTTGGTTGCTTCCTCTCTGGTTTGGTGTTGTTGACGCGGT TGGGCTACGGGTGCAGCAGTAAAGGAAGATAATGTATACCCATTTGTTAC GTCGTCCGGGCAATGTAGAGCACTGGATATACGTCCCAAGCAGAGTTTCG AAGGTGTGGGCGTGTCAACGACAGCCTGGTGGTATCCTTGAAGATCAAAA AGTGATTCGCGGCACTCGATTTATGTATTTTGTGGTAGAACTACAGCAGT ACCAGACAGACTGTGAGTATGACACGGCCGGTACTCTCGAGTTCGTCCCA CGTTGCAGTGAACATGAAAGTAGCGACACGCCGTTCCTTTGTTATGAAAT TGGCATGTAGCTGCTGTGTATATTCTATCTAGTATCTGGCCCACACGTGC GCGAATCATGCTTTCTCCAAAAGAGTACCATGGATGCGTGATTTACTCAC CCTCGCAGAGTAAGAGCATCTGTCATTCTGTTTTTTTTATCGGTGTCTTG TTGACACTAGGGTGAGCAGTGTAGCATCAATCAGCGAACCCTGTCGGTTC GGTCGTCTCATTGTGTTGTTTCCAGAAAAAACGAAAGAATAGTCCTCTCT CTCTGGCTTATGTATGTACACTGCGTATATAGATACACCAAATAGCTGCT ATAGTGACAAAACACCCTTGCTGCTAAAACAAAAGGTGGACTCGACCACC AGGATCAGCGAGTACGACGGCGAGACGCAGGGTGCGATCCGCAAGATCAT GTTCGACCAGCGGCAGAAGTCGCTGGGGCTCCCCACGAGCGACCAGCTCA ACGCCGACGCCGTGCTTGAGACGGCCAAAGGCTTGCCTGGCAGCCCTTTC CTTCCGGGGGGTGTTTTTGTTTGAGGGCGGTGGCGGTGGCAGTGGCATTG GCGGTGGTGGTGATGGCGACGGTCGTCTCGCGCCGGTTGAGGGTGTGATA GATAGCGACCCACCAAATCCGTCGGTACTACTGTAGTAGATGGATAGCTG TTCCAGCCTTCAAAACGTTTGACGTCGCCGTCGCCTGTCCAGGAGCTAGT TTTTGCTGTTGAAAAGGGCAGGTAATTAAGTCACGGAGTGAAGCAGCAGG AATCGATCATGGGTGCGGTGCTTCGAGGAACAAATAATGGCTTCGGGTTT TATCATTCCGTAGTAGGTGGTTGTGCCGGGGCCCACCCGACTTCGAAGCC GTTTATAAACGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1082:13640..16051-

>mRNA_L-elsbetiae_contig1082.765.1 ID=mRNA_L-elsbetiae_contig1082.765.1|Name=mRNA_L-elsbetiae_contig1082.765.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2466bp|location=Sequence derived from alignment at L-elsbetiae_contig1082:13640..16051- (Laminarionema elsbetiae ELsaHSoW15)
ATGACGGACATAGCGCAGAAATTCGACGAGGTGCTGAGGAACCTCGCGGG
GCAGGCCGGATCCCTGGAGGCCCTGCTTGGGGTGTTCTTCTCCTTCCTCC
ACCGCAACACCGATTTCTACGTCACCTTCGATCCAGCGAAGACAGCCAAG
GCAGGCATGGGTTTTCCGTCCGGGAAAGCGGAGCAGCTCCTGCTCCGCGC
CTTCCGATCCTTCCCGTACAAGCCATACAGTGGTGGTGGGGGCGGTGGCG
GCGGCGACGGCGGCAAGCAGCAGCGGCAACGGTCGTCGGGGGTGGGGAAG
CCAACGGGATCATCGGCCCTGTCGTCACGAACCACAGCGACCGCATCCTC
CAGCGGCTCGACATCGCGCAGCAAGCAGGCGCCGGCCTCTGTTGTTGACC
GAAGTGCTGGCACCTCTGGGCAAGACGCTCCCGTGGCCAAAGTAAAAGCG
GCAGCAGAAACGCCCACAACCTCTGCTTCGGCATCACCTCCAGCGCCACC
AGCACGCGCTCCCGGAGAAGACGCAGCTGCCCCTCCCTCCTCTGCCCAAC
CCAATCGGACAGCGGCGGCGGCGGCGGCGGCGGCGGGGGGCCTGCGCGTG
CGCTACACGAAGGACGGAAAGCAGGTGCCGATCGGCAACGGGGGCGTGAC
CCCCAGATACTACTGGACGCAGACGGTGAATGAGGCAACGGTCTACGTCG
ACGTACCTCCGGGCACTCGCTCAAAGGACGTAGAATGCGTAATCCTGCCT
CGACGTTTGAAGCTCAGGGTTAGAGGGGCGGGAGCAGAAACCCTGCTGAA
GGCGGTGGCCGGGGGCGCACGCAAAGCAGCGAGGGAAGGGGGCGCGCTTG
GCGAGGGCAGCAGAGGGGAGGGGCACGATGGTGGAGACTTGATTTTTGAT
GGTGAGTTGCCGAGCACGGTTTCGCGGGAGGATAGCATGTGGAGCCTGAA
TGACGGGACGACGGTGGTGATCTCGTTCGAGAAGACGACCAAGTCGTGGT
GGAAGAGCGTCGTCGAAGGGGACCCGGAGATAGATACCTCGAAGATGACG
GACATAGCGCAGAAATTCGACGAGGTGCTGAGGAACCTCGCGGGGCAGGC
CGGATCCCTGGAGGCCCTGCTTGGGGTGTTCTTCTCCTTCCTCCACCGCA
ACACCGATTTCTACGTCACCTTCGATCCAGCGAAGACAGCCAAGGCAGGC
ATGGGTTTTCCGTCCGGGAAAGCGGAGCAGCTCCTGCTCCGCGCCTTCCG
ATCCTTCCCGTACAAGCCATACAGTGGTGGTGGGGGCGGTGGCGGCGGCG
ACGGCGGCAAGCAGCAGCGGCAACGGTCGTCGGGGGTGGGGAAGCCAACG
GGATCATCGGCCCTGTCGTCACGAACCACAGCGACCGCATCCTCCAGCGG
CTCGACATCGCGCAGCAAGCAGGCGCCGGCCTCTGTTGTTGACCGAAGTG
CTGGCACCTCTGGGCAAGACGCTCCCGTGGCCAAAGTAAAAGCGGCAGCA
GAAACGCCCACAACCTCTGCTTCGGCATCACCTCCAGCGCCACCAGCACG
CGCTCCCGGAGAAGACGCAGCTGCCCCTCCCTCCTCTGCCCAACCCAATC
GGACAGCGGCGGCGGCGGCGGCGGCGGCGGGGGGCCTGCGCGTGCGCTAC
ACGAAGGACGGAAAGCAGGTGCCGATCGGCAACGGGGGCGTGACCCCCAG
ATACTACTGGACGCAGACGGTGAATGAGGCAACGGTCTACGTCGACGTAC
CTCCGGGCACTCGCTCAAAGGACGTAGAATGCGTAATCCTGCCTCGACGT
TTGAAGCTCAGGGTTAGAGGGGCGGGAGCAGAAACCCTGCTGAAGGCGGT
GGCCGGGGGCGCACGCAAAGCAGCGAGGGAAGGGGGCGCGCTTGGCGAGG
GCAGCAGAGGGGAGGGGCACGATGGTGGAGACTTGATTTTTGATGGTGAG
TTGCCGAGCACGGTTTCGCGGGAGGATAGCATGTGGAGCCTGAATGACGG
GACGACGGTGGTGATCTCGTTCGAGAAGACGACCAAGTCGTGGTGGAAGA
GCGTCGTCGAAGGGGACCCGGAGATAGATACCTCGAAGGTGGACTCGACC
ACCAGGATCAGCGAGTACGACGGCGAGACGCAGGGTGCGATCCGCAAGAT
CATGTTCGACCAGCGGCAGAAGTCGCTGGGGCTCCCCACGAGCGACCAGC
TCAACGCCGACGCCGTGCTTGAGACGGCCAAAGGCTTGCCTGGCAGCCCT
TTCCTTCCGGGGGGTGTTTTTGTTTGAGTGGACTCGACCACCAGGATCAG
CGAGTACGACGGCGAGACGCAGGGTGCGATCCGCAAGATCATGTTCGACC
AGCGGCAGAAGTCGCTGGGGCTCCCCACGAGCGACCAGCTCAACGCCGAC
GCCGTGCTTGAGACGGCCAAAGGCTTGCCTGGCAGCCCTTTCCTTCCGGG
GGGTGTTTTTGTTTGA
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