mRNA_L-elsbetiae_contig10029.75.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10029.75.1
Unique NamemRNA_L-elsbetiae_contig10029.75.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 2.360e-51
Identity = 133/285 (46.67%), Postives = 161/285 (56.49%), Query Frame = 2
Query:  785 ADVGIREACGQGY--SALDLAAKESHGDVVRALLWHGSS-VSSFNHRGYTALHHAAH--EPGCDNGDPIRMLLQAGADIEAKTTCGSC-TPLHLAVR--MNSIPAIRALLAGGANVNSRFPDGGTALHKACSRSCVGAVEALPCWGADEKLTNEDGKTAGDVAEAQDEDXXXNGDLKKQQRRADGQRIRRMLERTPADRSWRRRGWLVLARSCPAKVQITMEGNSDGGXXXXXXXXXXXXXXXGD---RSRDET-----AELARLVGRVVGLNLESVFRLMVGFL 1591
            A+ G+R  C  G   S L++AA   H DV++ALL   SS V + N  G+ ALH+ A   E   D GD +R+LL AGAD+  K T  SC TPLHLAV   M S   I ALL GGAN+N+R     T LH AC+R     VE L  WGADEKL N DG T  DV    +++     DL  ++R AD QRI RML R PADRSWRRRGWLVL+RSCP +V I    +S                  G    R  +ET      +L  LVGR+VGL  E +FRL+VGFL
Sbjct:  232 ANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQN-----DLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511          
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: D8LQE9_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE9_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 3.010e-51
Identity = 125/216 (57.87%), Postives = 153/216 (70.83%), Query Frame = 1
Query:   88 MSASTKSEDRTRLDGFELEVFELVRKHATSEQWREWLRTPLEHAAADGNTDLFSRLMGAGADGSAGWRG--CHGRTLLGAAAHG-KSKEMVLALLKAGAKDDVDVKFGSKRESALHVAAAHGAAQVSNALLLAGANPMMLNEDMESPLHLAAHAGHDGVVTNLILNRXXXXXXXXDDTCRTXXXXXXXXXXXXXXXXXXLGGAYADSPNCEGSTPL 726
            MSAS    DR+R+DGFE+E+F+LV++ AT+ QW++WLRTPLEHAAA GN DLF+RLM AGA G  GWRG  CH RTLLGAAA G KS +M+ ALL+AG  DDV+  FG++RESALHV+AA GA + S AL+ AGA+P + N + ESPLHLAA AGHD VV  ++L R         D   TXXXXXXXXXX        +GGA  D  + +G TPL
Sbjct:    1 MSAS--KGDRSRVDGFEIEIFKLVKEEATAGQWKQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPGWRGWGCHERTLLGAAACGTKSDKMIWALLEAGVTDDVNAVFGTERESALHVSAARGAEEASKALMAAGADPDLGNFEDESPLHLAAEAGHDRVV-RVLLERANVDAT--SDFQVTXXXXXXXXXXTLCVSELLIGGANKDVLDLQGETPL 211          
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 4.050e-50
Identity = 147/302 (48.68%), Postives = 181/302 (59.93%), Query Frame = 2
Query:  743 HNRLGAVEELLAAGADVGIREACGQGYSALDLAAKESHGDVVRALLWHGSS-VSSFNHRGYTALHHAAHEPGC--DNGDPIRMLLQAGADIEAKTTCGSC-TPLHLAV--RMNSIPAIRALLAGGANVNSRFPDGGTALHKACSRSCVGAVEALPCWGADEKLTNEDGKTAGDVAEAQDEDXXXNGDLKKQQRRADGQRIRRMLERTPADRSWRRRGWLVLARSCPAKVQITMEGNSDGGXXXXXXXXXXXXXXX--------GDRSRDETAE-----LARLVGRVVGLNLESVFRLMVGFL 1591
            ++ L AV+ELLAAGA+  +R       S L++AA     DVV+ALL   S  V + +  G+ ALH+AA   G   DNGD +R+LL+AGAD+ AK T   C T L+LAV  R+ S   IRALL GGAN+N+R     T LH ACSRS    VE L  WGAD+KLT   G+T   V  A  +D     DL  ++  AD QRIRRML R PA RSWRRRGWLVL+RSCP +VQI   G+S   XXXXXXXXX                R  +ETA+     L  LVGR++ L  + VFRL+VGFL
Sbjct:  183 NSHLEAVQELLAAGANYSLRT--NGSRSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQD-----DLDDEELEADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQIA-NGSSXXXXXXXXXXXXNGNSAKVAKVSGESSSRDDEETADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476          
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: D8LQE2_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE2_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 9.820e-50
Identity = 97/165 (58.79%), Postives = 121/165 (73.33%), Query Frame = 1
Query:   88 MSASTKSEDRTRLDGFELEVFELVRKHATSEQWREWLRTPLEHAAADGNTDLFSRLMGAGADGSAGWRGCHGRTLLGAAAHGK-SKEMVLALLKAGAKDDVDVKFGSKRESALHVAAAHGAAQVSNALLLAGANPMMLNEDMESPLHLAAHAGHDGVVTNLILNR 579
            M A  +   R+RLDGFE+E+F+LV++ A  EQW++W R PLEHA A GN DLF+RLM AGADG AGWRGCHGRTLLGAAA G  S +MV ALL+AGA+ DV+V+FG+  ES LHV+AA GA     AL++AGA+P + + +  S LHL A AGH GV   L+L R
Sbjct:    1 MYAPKRKGHRSRLDGFEIEIFKLVKEEAAPEQWKQWFRAPLEHATARGNLDLFTRLMDAGADGEAGWRGCHGRTLLGAAACGNNSDKMVRALLEAGARRDVNVRFGNTNESTLHVSAARGAEASCTALMIAGADPNLRDWEGASSLHLTAKAGHHGVAGILLLKR 165          
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 3.560e-47
Identity = 124/275 (45.09%), Postives = 159/275 (57.82%), Query Frame = 2
Query:  863 VVRALLWHGSS-VSSFNHRGYTALHHAA--HEPGCDNGDPIRMLLQAGADIEAKTTCGS--CTPLHLAV--RMNSIPAIRALLAGGANVNSRFPDGGTALHKACSRSCVGAVEALPCWGADEKLTNEDGKTAGDVAEAQDEDXXXNGDLKKQQRRADGQRIRRMLERTPADRSWRRRGWLVLARSCPAKVQITMEG---------NSDGGXXXXXXXXXXXXXXXGDRSRDET--AELARLVGRVVGLNLESVFRLMVGFL*GAKAGEIGCAFWS 1633
            +V+A L   +S V++ +H GYTALHHAA     G D GD +R+LL AGAD+ AKTT     C PLH+AV  R+ S   IRALL GGA+VN R  +  T LH+AC+ S V AVE L  WGADEKLT++   T  D+     +    +GD++     ADGQRI +ML R PADRSWRRR WLVL+RSCP +V+I  E          +S  G               G+R  ++    +L  LV R+VGL  + +FRL+VGFL   K G  G  F S
Sbjct:  258 IVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIE-----ADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSSSNGNSTKLARFSGEDSGGGERETEDQMMVDLRGLVTRLVGLEADGLFRLVVGFL---KRGRNGVLFTS 524          
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 7.460e-47
Identity = 121/260 (46.54%), Postives = 153/260 (58.85%), Query Frame = 2
Query:  884 HGSSVSSFNHRGYTALHHAA---HEPGCDNGDPIRMLLQAGADIEAKTTC-GSC-TPLHLAV--RMNSIPAIRALLAGGANVNSRFPDGGTALHKACSRSCVGAVEALPCWGADEKLTNEDGKT-AGDVAEAQDEDXXXNGDLKKQQR------RADGQRIRRMLERTPADRSWRRRGWLVLARSCPAKVQIT--------MEGNSDGGXXXXXXXXXXXXXXXGDRSRDE--TAELARLVGRVVGLNLESVFRLMVGFL 1591
            + S V + +  GYTALH      +EP  DNGD +R+LL+AGAD++AKTT  G+C TPLH AV  R+  I AIRALL GGANVN+R     T LH AC+RS V  VE L  WGADEKLT+ DG+T AG + ++++E      D   + R       AD  RIR+ML R PADRSW RR WLVL+RSCP KVQI+          G+S  G                D+  ++  T     LV R+VGL  + +FRL+VGFL
Sbjct:    8 YSSEVHATDDGGYTALHCCVCDINEPVLDNGDTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPAGAIVDSEEETPPDVTDAPGENRGKDEAIEADQHRIRQMLARAPADRSWHRRRWLVLSRSCPTKVQISNTSSSSNISSGSSGDGLSAEMVSVNCKDLGGDDKETEDQKTVNWRDLVVRLVGLEADVLFRLVVGFL 267          
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 8.750e-46
Identity = 99/167 (59.28%), Postives = 125/167 (74.85%), Query Frame = 1
Query:   88 MSASTKSEDRTRLDGFELEVFELVRKHATSEQWREWLRTPLEHAAADGNTDLFSRLMGAGADGSAGWRGC--HGRTLLGAAAHG-KSKEMVLALLKAGAKDDVDVKFGSKRESALHVAAAHGAAQVSNALLLAGANPMMLNEDMESPLHLAAHAGHDGVVTNLILNR 579
            MSAS + EDR+R+DGFE+E+F+LV++ ATS+QW++WLRTPLEHAAA GN DLF+RL+ AGA G  GW+G     RTLLGAAA G KS  MV ALL+AG  + V+  FG+ RESALHV  A GA   S AL++AGA+P + N D +SPLHLAA AGH  V+  L+L +
Sbjct:    1 MSASEREEDRSRVDGFEIEIFKLVKEEATSKQWKQWLRTPLEHAAAKGNLDLFTRLIDAGAGGEPGWQGWGHRERTLLGAAACGNKSDVMVQALLEAGETEFVNTSFGATRESALHVTVARGAEDASKALMMAGADPNLGNVDGDSPLHLAAEAGHHRVIGILLLRK 167          
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 8.640e-45
Identity = 95/150 (63.33%), Postives = 118/150 (78.67%), Query Frame = 1
Query:  124 LDGFELEVFELVRKHATSEQWREWLRTPLEHAAADGNTDLFSRLMGAGADGSAGWRGCHGRTLLGAAAHGKSKEMVLALL-KAGAKDDVDVKFGSKRESALHVAAAHGAAQVSNALLLAGANPMMLNEDMESPLHLAAHAGHDGVVTNLI 570
            LDG E+E+F+LVR+ ATS QWREWLR PLEHAAA+GN DLF+RLM AGADGSAGWRGCHGRTLLGAAA+GK++E+V  LL + GA +DV+V FG + ESALHVAA      +S  LL+AGA+P +L++   SPLH+AA  GH  V+  L+
Sbjct:   65 LDGLEVEIFKLVREQATSMQWREWLRAPLEHAAAEGNIDLFTRLMDAGADGSAGWRGCHGRTLLGAAAYGKNEEIVERLLAEDGATEDVNVCFGDRLESALHVAAGRDDQHLSRVLLIAGADPNLLDDVGRSPLHVAAEKGHHRVLGFLL 214          
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: A0A6H5KQY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY9_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 4.810e-43
Identity = 90/159 (56.60%), Postives = 116/159 (72.96%), Query Frame = 1
Query:   94 ASTKSEDRTRLDGFELEVFELVRKHATSEQWREWLRTPLEHAAADGNTDLFSRLMGAGADGSAGWRGCHGRTLLGAAAHGKSKEMVLALLKAGAKDDVDVKFGSKRESALHVAAAHGAAQVSNALLLAGANPMMLNED----MESPLHLAAHAGHDGVV 558
            + +K EDR+R+DGFE+++F+LV+   T EQW++WL  PL HAAA G  DLF+RL+ AGADGSAGWRGCHGRTLLG AA     +MV A L+AGA DDV+V+FG+  +SAL VAAA GA    +AL++AGA+P  ++ D    + S LHLA  AGH  VV
Sbjct:    2 SGSKREDRSRVDGFEMKIFKLVQAEETPEQWKKWLGAPLNHAAAKGKLDLFTRLINAGADGSAGWRGCHGRTLLGEAARSDGNQMVRAFLEAGATDDVNVRFGAISQSALQVAAARGAEGSCSALMIAGADPNWIDYDDTVQLPSLLHLAGAAGHHRVV 160          
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 7.590e-43
Identity = 113/244 (46.31%), Postives = 138/244 (56.56%), Query Frame = 2
Query:  890 SSVSSFNHRGYTALHHAAHEPGC--DNGDPIRMLLQAGADIEAKTTCGSC-TPLHLAV--RMNSIPAIRALLAGGANVNSRFPDGGTALHKACSRSCVGAVEALPCWGADEKLTNEDGKTAGDVAEAQDEDXXXNGDLKKQQRRADGQRIRRMLERTPADRSWRRRGWLVLARSCPAKVQITMEGNSDGGXXXXXXXXXXXXXXXGDRSRDET-----AELARLVGRVVGLNLESVFRLMVGFL 1591
            S V++ N  G  ALH+AA   G   D GD +R+LL AG D+   TT  SC TPLH+AV  R+ S   IRALL G A+V+SR     T LH AC  + V  VE L  WGADE+LTN  G    DV  A+ +     GDL  ++  AD QRI RML R PADRSWRRRGWLVL+R CP +VQI    +S G                  R  +ET     A+L  LV  +VGL  +S+FRL+V FL
Sbjct:   33 SDVNATNDLGLAALHYAASVVGPVHDKGDAVRVLLGAGVDVNVNTTTDSCFTPLHVAVDGRIASDGTIRALLEG-ADVDSRARHDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRARQQ-----GDLDDEEHDADNQRICRMLTRAPADRSWRRRGWLVLSRYCPTRVQIDNGSSSRGSYNGNSAKVATLSGEDTGRGDEETEDRIMADLRDLVDWLVGLEADSLFRLVVAFL 270          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQN0_ECTSI2.360e-5146.67Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
D8LQE9_ECTSI3.010e-5157.87Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
A0A6H5L812_9PHAE4.050e-5048.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQE2_ECTSI9.820e-5058.79Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LD22_ECTSI3.560e-4745.09MHC_I C-terminus family protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6K9_9PHAE7.460e-4746.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ92_ECTSI8.750e-4659.28Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ecto... [more]
D7G692_ECTSI8.640e-4563.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQY9_9PHAE4.810e-4356.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXF0_9PHAE7.590e-4346.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10029contigL-elsbetiae_contig10029:3394..5317 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score194.5
Seed ortholog evalue7.8e-47
Seed eggNOG ortholog2880.D8LQN0
KEGG koko:K21440
Hectar predicted targeting categorymitochondrion
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size1924
Cds size990
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10029.75.1prot_L-elsbetiae_contig10029.75.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10029 3998..4987 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815236.2962568-UTR-L-elsbetiae_contig10029:3393..39971622815236.2962568-UTR-L-elsbetiae_contig10029:3393..3997Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10029 3394..3997 +
1691682787.2207062-UTR-L-elsbetiae_contig10029:3393..39971691682787.2207062-UTR-L-elsbetiae_contig10029:3393..3997Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10029 3394..3997 +
1622815236.3193195-UTR-L-elsbetiae_contig10029:4987..53171622815236.3193195-UTR-L-elsbetiae_contig10029:4987..5317Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10029 4988..5317 +
1691682787.2486932-UTR-L-elsbetiae_contig10029:4987..53171691682787.2486932-UTR-L-elsbetiae_contig10029:4987..5317Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10029 4988..5317 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815236.308965-CDS-L-elsbetiae_contig10029:3997..49871622815236.308965-CDS-L-elsbetiae_contig10029:3997..4987Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10029 3998..4987 +
1691682787.237556-CDS-L-elsbetiae_contig10029:3997..49871691682787.237556-CDS-L-elsbetiae_contig10029:3997..4987Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10029 3998..4987 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10029.75.1

>prot_L-elsbetiae_contig10029.75.1 ID=prot_L-elsbetiae_contig10029.75.1|Name=mRNA_L-elsbetiae_contig10029.75.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=330bp
MIRAGLLFTSLPGRVMHCACPSLCSAGHMRILQIARVQRHSTWAAEHNRL
GAVEELLAAGADVGIREACGQGYSALDLAAKESHGDVVRALLWHGSSVSS
FNHRGYTALHHAAHEPGCDNGDPIRMLLQAGADIEAKTTCGSCTPLHLAV
RMNSIPAIRALLAGGANVNSRFPDGGTALHKACSRSCVGAVEALPCWGAD
EKLTNEDGKTAGDVAEAQDEDDDDNGDLKKQQRRADGQRIRRMLERTPAD
RSWRRRGWLVLARSCPAKVQITMEGNSDGGGSGSSTKTAKASHSDGDRSR
DETAELARLVGRVVGLNLESVFRLMVGFL*
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mRNA from alignment at L-elsbetiae_contig10029:3394..5317+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10029.75.1 ID=mRNA_L-elsbetiae_contig10029.75.1|Name=mRNA_L-elsbetiae_contig10029.75.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1924bp|location=Sequence derived from alignment at L-elsbetiae_contig10029:3394..5317+ (Laminarionema elsbetiae ELsaHSoW15)
AGCGGTGTAGACTGTAGACTGCGCTGGCAGATAATTATTAGATACATTCA CCACTTCAAGCGATCGAGTGCAAGGACAGTCTCCAAGATGTCAGCTTCTA CGAAAAGTGAAGACCGCACGCGGCTTGACGGCTTCGAACTCGAGGTTTTC GAACTCGTCCGAAAGCATGCCACCTCCGAGCAATGGAGGGAGTGGCTTCG GACGCCTCTGGAGCACGCCGCCGCCGACGGAAATACGGACCTCTTCTCGA GGCTGATGGGCGCTGGGGCGGACGGTAGTGCAGGCTGGAGGGGCTGCCAT GGACGAACGCTGCTCGGTGCTGCTGCACACGGCAAGAGCAAGGAGATGGT GCTGGCGCTGCTCAAGGCGGGGGCAAAGGATGATGTGGACGTCAAGTTCG GATCGAAGCGGGAGTCGGCACTCCATGTAGCGGCGGCACACGGCGCAGCA CAAGTATCCAATGCTCTCCTGCTGGCTGGAGCAAATCCGATGATGCTGAA CGAAGACATGGAAAGCCCGCTGCACCTGGCCGCTCATGCAGGGCATGATG GCGTGGTGACCAACCTGATCCTGAATCGGGCTGACCCGAACGCAATGACG GAAGATGATACGTGCCGGACTCCTCTTCACCTCGCTGCCCGGGAGGGTCA TGCACTGTGCGTGTCCAAGCTTATGCTCGGCGGGGCATATGCGGATTCTC CAAATTGCGAGGGTTCAACGCCACTCCACCTGGGCCGCGGAACACAACCG CCTCGGGGCAGTCGAAGAGCTCTTGGCTGCTGGTGCCGACGTCGGCATCC GTGAGGCATGTGGCCAAGGCTATTCTGCGCTCGATTTGGCGGCGAAAGAG AGTCATGGGGACGTCGTGAGAGCGCTTCTGTGGCACGGAAGCAGCGTCTC GTCATTCAATCATCGTGGCTACACAGCCCTGCACCATGCCGCCCACGAAC CTGGTTGCGATAATGGCGACCCCATTCGCATGCTACTGCAAGCCGGGGCT GACATCGAAGCGAAAACCACCTGCGGCAGCTGTACGCCGCTCCACCTTGC GGTCCGCATGAATTCAATTCCCGCGATCCGCGCCTTGTTAGCAGGCGGCG CTAACGTCAATTCGCGCTTTCCAGATGGAGGCACCGCACTGCACAAAGCC TGCTCCCGATCCTGTGTTGGTGCTGTGGAGGCTCTGCCGTGCTGGGGCGC AGATGAGAAGCTCACGAACGAAGATGGAAAGACAGCGGGGGACGTGGCGG AAGCGCAGGACGAAGACGACGACGACAACGGCGACCTCAAAAAACAACAA CGCAGAGCTGATGGCCAGCGCATTCGCCGCATGCTGGAGCGCACCCCAGC CGACAGGTCCTGGCGTCGCCGCGGCTGGCTGGTGCTGGCCCGCTCCTGTC CGGCCAAGGTGCAGATCACAATGGAGGGCAACAGCGACGGCGGTGGCAGT GGCAGCTCTACCAAGACGGCAAAGGCCAGCCACAGCGATGGCGACAGGAG TAGAGACGAAACGGCTGAGTTGGCGCGTTTGGTAGGCAGGGTGGTTGGTC TGAATCTGGAGAGCGTGTTCCGCTTGATGGTAGGCTTCCTTTGAGGTGCG AAAGCGGGGGAGATCGGCTGTGCCTTCTGGTCATCATTTTCCTGCGTCTA CACAGGGCGAACACAGAATGCATGGGTGCTGTGCACAACAGCAGTGGATA GCTATTGTGGAGATCACCTTTCTAAAGGACACAATCTCCCATTGGCTGTT GGAGACGTTTTTAACAAATAAATGTCTGTGTACAAATGTCAGCGGTCTAC ATACGTCCAACCTGTGAAAAAAGTCATTCCAGGGGGAATGTTTTACTGTT CACGGTCACGAACTATGCTGTAGTGTCTTGTCCTTGGTTTCGGTTTTGCT TCGTTTTTTTATCGATTTGTAGCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10029:3394..5317+

>mRNA_L-elsbetiae_contig10029.75.1 ID=mRNA_L-elsbetiae_contig10029.75.1|Name=mRNA_L-elsbetiae_contig10029.75.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1980bp|location=Sequence derived from alignment at L-elsbetiae_contig10029:3394..5317+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATACGTGCCGGACTCCTCTTCACCTCGCTGCCCGGGAGGGTCATGCA
CTGTGCGTGTCCAAGCTTATGCTCGGCGGGGCATATGCGGATTCTCCAAA
TTGCGAGGGTTCAACGCCACTCCACCTGGGCCGCGGAACACAACCGCCTC
GGGGCAGTCGAAGAGCTCTTGGCTGCTGGTGCCGACGTCGGCATCCGTGA
GGCATGTGGCCAAGGCTATTCTGCGCTCGATTTGGCGGCGAAAGAGAGTC
ATGGGGACGTCGTGAGAGCGCTTCTGTGGCACGGAAGCAGCGTCTCGTCA
TTCAATCATCGTGGCTACACAGCCCTGCACCATGCCGCCCACGAACCTGG
TTGCGATAATGGCGACCCCATTCGCATGCTACTGCAAGCCGGGGCTGACA
TCGAAGCGAAAACCACCTGCGGCAGCTGTACGCCGCTCCACCTTGCGGTC
CGCATGAATTCAATTCCCGCGATCCGCGCCTTGTTAGCAGGCGGCGCTAA
CGTCAATTCGCGCTTTCCAGATGGAGGCACCGCACTGCACAAAGCCTGCT
CCCGATCCTGTGTTGGTGCTGTGGAGGCTCTGCCGTGCTGGGGCGCAGAT
GAGAAGCTCACGAACGAAGATGGAAAGACAGCGGGGGACGTGGCGGAAGC
GCAGGACGAAGACGACGACGACAACGGCGACCTCAAAAAACAACAACGCA
GAGCTGATGGCCAGCGCATTCGCCGCATGCTGGAGCGCACCCCAGCCGAC
AGGTCCTGGCGTCGCCGCGGCTGGCTGGTGCTGGCCCGCTCCTGTCCGGC
CAAGGTGCAGATCACAATGGAGGGCAACAGCGACGGCGGTGGCAGTGGCA
GCTCTACCAAGACGGCAAAGGCCAGCCACAGCGATGGCGACAGGAGTAGA
GACGAAACGGCTGAGTTGGCGCGTTTGGTAGGCAGGGTGGTTGGTCTGAA
TCTGGAGAGCGTGTTCCGCTTGATGGTAGGCTTCCTTTGAATGATACGTG
CCGGACTCCTCTTCACCTCGCTGCCCGGGAGGGTCATGCACTGTGCGTGT
CCAAGCTTATGCTCGGCGGGGCATATGCGGATTCTCCAAATTGCGAGGGT
TCAACGCCACTCCACCTGGGCCGCGGAACACAACCGCCTCGGGGCAGTCG
AAGAGCTCTTGGCTGCTGGTGCCGACGTCGGCATCCGTGAGGCATGTGGC
CAAGGCTATTCTGCGCTCGATTTGGCGGCGAAAGAGAGTCATGGGGACGT
CGTGAGAGCGCTTCTGTGGCACGGAAGCAGCGTCTCGTCATTCAATCATC
GTGGCTACACAGCCCTGCACCATGCCGCCCACGAACCTGGTTGCGATAAT
GGCGACCCCATTCGCATGCTACTGCAAGCCGGGGCTGACATCGAAGCGAA
AACCACCTGCGGCAGCTGTACGCCGCTCCACCTTGCGGTCCGCATGAATT
CAATTCCCGCGATCCGCGCCTTGTTAGCAGGCGGCGCTAACGTCAATTCG
CGCTTTCCAGATGGAGGCACCGCACTGCACAAAGCCTGCTCCCGATCCTG
TGTTGGTGCTGTGGAGGCTCTGCCGTGCTGGGGCGCAGATGAGAAGCTCA
CGAACGAAGATGGAAAGACAGCGGGGGACGTGGCGGAAGCGCAGGACGAA
GACGACGACGACAACGGCGACCTCAAAAAACAACAACGCAGAGCTGATGG
CCAGCGCATTCGCCGCATGCTGGAGCGCACCCCAGCCGACAGGTCCTGGC
GTCGCCGCGGCTGGCTGGTGCTGGCCCGCTCCTGTCCGGCCAAGGTGCAG
ATCACAATGGAGGGCAACAGCGACGGCGGTGGCAGTGGCAGCTCTACCAA
GACGGCAAAGGCCAGCCACAGCGATGGCGACAGGAGTAGAGACGAAACGG
CTGAGTTGGCGCGTTTGGTAGGCAGGGTGGTTGGTCTGAATCTGGAGAGC
GTGTTCCGCTTGATGGTAGGCTTCCTTTGA
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