mRNA_L-elsbetiae_contig10029.75.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 195 bits (495), Expect = 2.360e-51 Identity = 133/285 (46.67%), Postives = 161/285 (56.49%), Query Frame = 2 Query: 785 ADVGIREACGQGY--SALDLAAKESHGDVVRALLWHGSS-VSSFNHRGYTALHHAAH--EPGCDNGDPIRMLLQAGADIEAKTTCGSC-TPLHLAVR--MNSIPAIRALLAGGANVNSRFPDGGTALHKACSRSCVGAVEALPCWGADEKLTNEDGKTAGDVAEAQDEDXXXNGDLKKQQRRADGQRIRRMLERTPADRSWRRRGWLVLARSCPAKVQITMEGNSDGGXXXXXXXXXXXXXXXGD---RSRDET-----AELARLVGRVVGLNLESVFRLMVGFL 1591 A+ G+R C G S L++AA H DV++ALL SS V + N G+ ALH+ A E D GD +R+LL AGAD+ K T SC TPLHLAV M S I ALL GGAN+N+R T LH AC+R VE L WGADEKL N DG T DV +++ DL ++R AD QRI RML R PADRSWRRRGWLVL+RSCP +V I +S G R +ET +L LVGR+VGL E +FRL+VGFL Sbjct: 232 ANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQN-----DLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: D8LQE9_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE9_ECTSI) HSP 1 Score: 186 bits (472), Expect = 3.010e-51 Identity = 125/216 (57.87%), Postives = 153/216 (70.83%), Query Frame = 1 Query: 88 MSASTKSEDRTRLDGFELEVFELVRKHATSEQWREWLRTPLEHAAADGNTDLFSRLMGAGADGSAGWRG--CHGRTLLGAAAHG-KSKEMVLALLKAGAKDDVDVKFGSKRESALHVAAAHGAAQVSNALLLAGANPMMLNEDMESPLHLAAHAGHDGVVTNLILNRXXXXXXXXDDTCRTXXXXXXXXXXXXXXXXXXLGGAYADSPNCEGSTPL 726 MSAS DR+R+DGFE+E+F+LV++ AT+ QW++WLRTPLEHAAA GN DLF+RLM AGA G GWRG CH RTLLGAAA G KS +M+ ALL+AG DDV+ FG++RESALHV+AA GA + S AL+ AGA+P + N + ESPLHLAA AGHD VV ++L R D TXXXXXXXXXX +GGA D + +G TPL Sbjct: 1 MSAS--KGDRSRVDGFEIEIFKLVKEEATAGQWKQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPGWRGWGCHERTLLGAAACGTKSDKMIWALLEAGVTDDVNAVFGTERESALHVSAARGAEEASKALMAAGADPDLGNFEDESPLHLAAEAGHDRVV-RVLLERANVDAT--SDFQVTXXXXXXXXXXTLCVSELLIGGANKDVLDLQGETPL 211
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 191 bits (484), Expect = 4.050e-50 Identity = 147/302 (48.68%), Postives = 181/302 (59.93%), Query Frame = 2 Query: 743 HNRLGAVEELLAAGADVGIREACGQGYSALDLAAKESHGDVVRALLWHGSS-VSSFNHRGYTALHHAAHEPGC--DNGDPIRMLLQAGADIEAKTTCGSC-TPLHLAV--RMNSIPAIRALLAGGANVNSRFPDGGTALHKACSRSCVGAVEALPCWGADEKLTNEDGKTAGDVAEAQDEDXXXNGDLKKQQRRADGQRIRRMLERTPADRSWRRRGWLVLARSCPAKVQITMEGNSDGGXXXXXXXXXXXXXXX--------GDRSRDETAE-----LARLVGRVVGLNLESVFRLMVGFL 1591 ++ L AV+ELLAAGA+ +R S L++AA DVV+ALL S V + + G+ ALH+AA G DNGD +R+LL+AGAD+ AK T C T L+LAV R+ S IRALL GGAN+N+R T LH ACSRS VE L WGAD+KLT G+T V A +D DL ++ AD QRIRRML R PA RSWRRRGWLVL+RSCP +VQI G+S XXXXXXXXX R +ETA+ L LVGR++ L + VFRL+VGFL Sbjct: 183 NSHLEAVQELLAAGANYSLRT--NGSRSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQD-----DLDDEELEADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQIA-NGSSXXXXXXXXXXXXNGNSAKVAKVSGESSSRDDEETADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: D8LQE2_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE2_ECTSI) HSP 1 Score: 180 bits (456), Expect = 9.820e-50 Identity = 97/165 (58.79%), Postives = 121/165 (73.33%), Query Frame = 1 Query: 88 MSASTKSEDRTRLDGFELEVFELVRKHATSEQWREWLRTPLEHAAADGNTDLFSRLMGAGADGSAGWRGCHGRTLLGAAAHGK-SKEMVLALLKAGAKDDVDVKFGSKRESALHVAAAHGAAQVSNALLLAGANPMMLNEDMESPLHLAAHAGHDGVVTNLILNR 579 M A + R+RLDGFE+E+F+LV++ A EQW++W R PLEHA A GN DLF+RLM AGADG AGWRGCHGRTLLGAAA G S +MV ALL+AGA+ DV+V+FG+ ES LHV+AA GA AL++AGA+P + + + S LHL A AGH GV L+L R Sbjct: 1 MYAPKRKGHRSRLDGFEIEIFKLVKEEAAPEQWKQWFRAPLEHATARGNLDLFTRLMDAGADGEAGWRGCHGRTLLGAAACGNNSDKMVRALLEAGARRDVNVRFGNTNESTLHVSAARGAEASCTALMIAGADPNLRDWEGASSLHLTAKAGHHGVAGILLLKR 165
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 184 bits (467), Expect = 3.560e-47 Identity = 124/275 (45.09%), Postives = 159/275 (57.82%), Query Frame = 2 Query: 863 VVRALLWHGSS-VSSFNHRGYTALHHAA--HEPGCDNGDPIRMLLQAGADIEAKTTCGS--CTPLHLAV--RMNSIPAIRALLAGGANVNSRFPDGGTALHKACSRSCVGAVEALPCWGADEKLTNEDGKTAGDVAEAQDEDXXXNGDLKKQQRRADGQRIRRMLERTPADRSWRRRGWLVLARSCPAKVQITMEG---------NSDGGXXXXXXXXXXXXXXXGDRSRDET--AELARLVGRVVGLNLESVFRLMVGFL*GAKAGEIGCAFWS 1633 +V+A L +S V++ +H GYTALHHAA G D GD +R+LL AGAD+ AKTT C PLH+AV R+ S IRALL GGA+VN R + T LH+AC+ S V AVE L WGADEKLT++ T D+ + +GD++ ADGQRI +ML R PADRSWRRR WLVL+RSCP +V+I E +S G G+R ++ +L LV R+VGL + +FRL+VGFL K G G F S Sbjct: 258 IVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIE-----ADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSSSNGNSTKLARFSGEDSGGGERETEDQMMVDLRGLVTRLVGLEADGLFRLVVGFL---KRGRNGVLFTS 524
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE) HSP 1 Score: 176 bits (445), Expect = 7.460e-47 Identity = 121/260 (46.54%), Postives = 153/260 (58.85%), Query Frame = 2 Query: 884 HGSSVSSFNHRGYTALHHAA---HEPGCDNGDPIRMLLQAGADIEAKTTC-GSC-TPLHLAV--RMNSIPAIRALLAGGANVNSRFPDGGTALHKACSRSCVGAVEALPCWGADEKLTNEDGKT-AGDVAEAQDEDXXXNGDLKKQQR------RADGQRIRRMLERTPADRSWRRRGWLVLARSCPAKVQIT--------MEGNSDGGXXXXXXXXXXXXXXXGDRSRDE--TAELARLVGRVVGLNLESVFRLMVGFL 1591 + S V + + GYTALH +EP DNGD +R+LL+AGAD++AKTT G+C TPLH AV R+ I AIRALL GGANVN+R T LH AC+RS V VE L WGADEKLT+ DG+T AG + ++++E D + R AD RIR+ML R PADRSW RR WLVL+RSCP KVQI+ G+S G D+ ++ T LV R+VGL + +FRL+VGFL Sbjct: 8 YSSEVHATDDGGYTALHCCVCDINEPVLDNGDTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPAGAIVDSEEETPPDVTDAPGENRGKDEAIEADQHRIRQMLARAPADRSWHRRRWLVLSRSCPTKVQISNTSSSSNISSGSSGDGLSAEMVSVNCKDLGGDDKETEDQKTVNWRDLVVRLVGLEADVLFRLVVGFL 267
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI) HSP 1 Score: 177 bits (449), Expect = 8.750e-46 Identity = 99/167 (59.28%), Postives = 125/167 (74.85%), Query Frame = 1 Query: 88 MSASTKSEDRTRLDGFELEVFELVRKHATSEQWREWLRTPLEHAAADGNTDLFSRLMGAGADGSAGWRGC--HGRTLLGAAAHG-KSKEMVLALLKAGAKDDVDVKFGSKRESALHVAAAHGAAQVSNALLLAGANPMMLNEDMESPLHLAAHAGHDGVVTNLILNR 579 MSAS + EDR+R+DGFE+E+F+LV++ ATS+QW++WLRTPLEHAAA GN DLF+RL+ AGA G GW+G RTLLGAAA G KS MV ALL+AG + V+ FG+ RESALHV A GA S AL++AGA+P + N D +SPLHLAA AGH V+ L+L + Sbjct: 1 MSASEREEDRSRVDGFEIEIFKLVKEEATSKQWKQWLRTPLEHAAAKGNLDLFTRLIDAGAGGEPGWQGWGHRERTLLGAAACGNKSDVMVQALLEAGETEFVNTSFGATRESALHVTVARGAEDASKALMMAGADPNLGNVDGDSPLHLAAEAGHHRVIGILLLRK 167
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI) HSP 1 Score: 178 bits (452), Expect = 8.640e-45 Identity = 95/150 (63.33%), Postives = 118/150 (78.67%), Query Frame = 1 Query: 124 LDGFELEVFELVRKHATSEQWREWLRTPLEHAAADGNTDLFSRLMGAGADGSAGWRGCHGRTLLGAAAHGKSKEMVLALL-KAGAKDDVDVKFGSKRESALHVAAAHGAAQVSNALLLAGANPMMLNEDMESPLHLAAHAGHDGVVTNLI 570 LDG E+E+F+LVR+ ATS QWREWLR PLEHAAA+GN DLF+RLM AGADGSAGWRGCHGRTLLGAAA+GK++E+V LL + GA +DV+V FG + ESALHVAA +S LL+AGA+P +L++ SPLH+AA GH V+ L+ Sbjct: 65 LDGLEVEIFKLVREQATSMQWREWLRAPLEHAAAEGNIDLFTRLMDAGADGSAGWRGCHGRTLLGAAAYGKNEEIVERLLAEDGATEDVNVCFGDRLESALHVAAGRDDQHLSRVLLIAGADPNLLDDVGRSPLHVAAEKGHHRVLGFLL 214
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: A0A6H5KQY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY9_9PHAE) HSP 1 Score: 167 bits (424), Expect = 4.810e-43 Identity = 90/159 (56.60%), Postives = 116/159 (72.96%), Query Frame = 1 Query: 94 ASTKSEDRTRLDGFELEVFELVRKHATSEQWREWLRTPLEHAAADGNTDLFSRLMGAGADGSAGWRGCHGRTLLGAAAHGKSKEMVLALLKAGAKDDVDVKFGSKRESALHVAAAHGAAQVSNALLLAGANPMMLNED----MESPLHLAAHAGHDGVV 558 + +K EDR+R+DGFE+++F+LV+ T EQW++WL PL HAAA G DLF+RL+ AGADGSAGWRGCHGRTLLG AA +MV A L+AGA DDV+V+FG+ +SAL VAAA GA +AL++AGA+P ++ D + S LHLA AGH VV Sbjct: 2 SGSKREDRSRVDGFEMKIFKLVQAEETPEQWKKWLGAPLNHAAAKGKLDLFTRLINAGADGSAGWRGCHGRTLLGEAARSDGNQMVRAFLEAGATDDVNVRFGAISQSALQVAAARGAEGSCSALMIAGADPNWIDYDDTVQLPSLLHLAGAAGHHRVV 160
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE) HSP 1 Score: 165 bits (417), Expect = 7.590e-43 Identity = 113/244 (46.31%), Postives = 138/244 (56.56%), Query Frame = 2 Query: 890 SSVSSFNHRGYTALHHAAHEPGC--DNGDPIRMLLQAGADIEAKTTCGSC-TPLHLAV--RMNSIPAIRALLAGGANVNSRFPDGGTALHKACSRSCVGAVEALPCWGADEKLTNEDGKTAGDVAEAQDEDXXXNGDLKKQQRRADGQRIRRMLERTPADRSWRRRGWLVLARSCPAKVQITMEGNSDGGXXXXXXXXXXXXXXXGDRSRDET-----AELARLVGRVVGLNLESVFRLMVGFL 1591 S V++ N G ALH+AA G D GD +R+LL AG D+ TT SC TPLH+AV R+ S IRALL G A+V+SR T LH AC + V VE L WGADE+LTN G DV A+ + GDL ++ AD QRI RML R PADRSWRRRGWLVL+R CP +VQI +S G R +ET A+L LV +VGL +S+FRL+V FL Sbjct: 33 SDVNATNDLGLAALHYAASVVGPVHDKGDAVRVLLGAGVDVNVNTTTDSCFTPLHVAVDGRIASDGTIRALLEG-ADVDSRARHDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRARQQ-----GDLDDEEHDADNQRICRMLTRAPADRSWRRRGWLVLSRYCPTRVQIDNGSSSRGSYNGNSAKVATLSGEDTGRGDEETEDRIMADLRDLVDWLVGLEADSLFRLVVAFL 270 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10029.75.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10029.75.1 >prot_L-elsbetiae_contig10029.75.1 ID=prot_L-elsbetiae_contig10029.75.1|Name=mRNA_L-elsbetiae_contig10029.75.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=330bp MIRAGLLFTSLPGRVMHCACPSLCSAGHMRILQIARVQRHSTWAAEHNRLback to top mRNA from alignment at L-elsbetiae_contig10029:3394..5317+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10029.75.1 ID=mRNA_L-elsbetiae_contig10029.75.1|Name=mRNA_L-elsbetiae_contig10029.75.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1924bp|location=Sequence derived from alignment at L-elsbetiae_contig10029:3394..5317+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10029:3394..5317+ >mRNA_L-elsbetiae_contig10029.75.1 ID=mRNA_L-elsbetiae_contig10029.75.1|Name=mRNA_L-elsbetiae_contig10029.75.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1980bp|location=Sequence derived from alignment at L-elsbetiae_contig10029:3394..5317+ (Laminarionema elsbetiae ELsaHSoW15)back to top |