prot_L-elsbetiae_contig10796.741.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10796.741.1
Unique Nameprot_L-elsbetiae_contig10796.741.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length162
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig10796.741.1 vs. uniprot
Match: A0A6H5LAN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAN5_9PHAE)

HSP 1 Score: 247 bits (630), Expect = 6.380e-73
Identity = 126/150 (84.00%), Postives = 134/150 (89.33%), Query Frame = 0 
Query:   11 RSSVGLRMNPATVENAEEAWLPAAEAELTALAAEAEKVDRMPDALLLRPPPPGGVDLITPDPRYKPFLAELPADEASPEWCLRPQDIPREVPATKGLLLGYAPGTTTFRAYAGAPQLTHHWKPKRERRSSGLACMRGQASRGVWQPARAP 160
            R ++G RM P T +NAEEAWL AAEAELTALAAEAEKVDRMPD+LLLRPPPP GVDLITPDPRYK FL ELP DEASPEWCLRPQ+IP EVP TKGLLLGY+PGTTT RAYAGAP+ +  WKPKRERRSSGLACMRGQASRGVWQPARAP
Sbjct:  949 RQTLG-RMIPDTADNAEEAWLRAAEAELTALAAEAEKVDRMPDSLLLRPPPPDGVDLITPDPRYKGFLPELPIDEASPEWCLRPQEIPLEVPVTKGLLLGYSPGTTTLRAYAGAPRFSSFWKPKRERRSSGLACMRGQASRGVWQPARAP 1097
[Close]
BLAST of mRNA_L-elsbetiae_contig10796.741.1 vs. uniprot
Match: D7FVH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH9_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 7.190e-42
Identity = 74/88 (84.09%), Postives = 79/88 (89.77%), Query Frame = 0 
Query:   73 RYKPFLAELPADEASPEWCLRPQDIPREVPATKGLLLGYAPGTTTFRAYAGAPQLTHHWKPKRERRSSGLACMRGQASRGVWQPARAP 160
            RYK FL ELP DEASPEWCLRPQ+IPREVP TKGLLLGY+PGTTT RAYA AP+L+  WKPKRERRSSGLACM GQASRGVW+PARAP
Sbjct: 1012 RYKGFLPELPIDEASPEWCLRPQEIPREVPVTKGLLLGYSPGTTTLRAYANAPRLSSFWKPKRERRSSGLACMSGQASRGVWRPARAP 1099
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10796.741.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LAN5_9PHAE6.380e-7384.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVH9_ECTSI7.190e-4284.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10796contigL-elsbetiae_contig10796:1344..3609 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10796.741.1mRNA_L-elsbetiae_contig10796.741.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10796 1344..3610 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10796.741.1 ID=prot_L-elsbetiae_contig10796.741.1|Name=mRNA_L-elsbetiae_contig10796.741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=162bp
RASKASLGRRRSSVGLRMNPATVENAEEAWLPAAEAELTALAAEAEKVDR
MPDALLLRPPPPGGVDLITPDPRYKPFLAELPADEASPEWCLRPQDIPRE
VPATKGLLLGYAPGTTTFRAYAGAPQLTHHWKPKRERRSSGLACMRGQAS
RGVWQPARAPTA
back to top