mRNA_L-elsbetiae_contig10795.740.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10795.740.1
Unique NamemRNA_L-elsbetiae_contig10795.740.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig10795.740.1 vs. uniprot
Match: D7G3Z3_ECTSI (1-phosphatidylinositol-3-phosphate 5-kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z3_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 1.820e-77
Identity = 132/140 (94.29%), Postives = 138/140 (98.57%), Query Frame = 1 
Query:    1 QVLLDENFMEFTEGQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSIIVGLDEERRELVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAMDRYFMTVPDKWTGFAMSNTVPNFEGVDLEHPQ 420
            QVLLDENFME+TEGQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSI+VGLDEERRELVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAMDRYFMTVPDKWTGFAMS++VPNF GVDL+ P+
Sbjct: 3076 QVLLDENFMEYTEGQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSIVVGLDEERRELVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAMDRYFMTVPDKWTGFAMSSSVPNFGGVDLDQPR 3215
[Close]
BLAST of mRNA_L-elsbetiae_contig10795.740.1 vs. uniprot
Match: A0A6H5K771_9PHAE (PIPK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K771_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 4.560e-77
Identity = 131/140 (93.57%), Postives = 138/140 (98.57%), Query Frame = 1 
Query:    1 QVLLDENFMEFTEGQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSIIVGLDEERRELVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAMDRYFMTVPDKWTGFAMSNTVPNFEGVDLEHPQ 420
            QVLLDENFME+T+GQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSI+VGLDEERRELVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAMDRYFMTVPDKWTGFAMS++VPNF GVDL+ P+
Sbjct: 2774 QVLLDENFMEYTQGQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSIVVGLDEERRELVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAMDRYFMTVPDKWTGFAMSSSVPNFGGVDLDQPR 2913
[Close]
BLAST of mRNA_L-elsbetiae_contig10795.740.1 vs. uniprot
Match: A0A835ZDL9_9STRA (PIPK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL9_9STRA)

HSP 1 Score: 198 bits (503), Expect = 5.460e-60
Identity = 95/115 (82.61%), Postives = 107/115 (93.04%), Query Frame = 1 
Query:   25 MEFTEGQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSIIVGLDEERRELVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAMDRYFMTVPDKWTGFA 369
            MEFT GQPLP+ D  KAVF TAI+NDTLFL++VN+VDYSI+VGLDE+RRELVVGIIDYMRQYDIIKR+ERMGKSVSM+ GQAEPTIVQPS+YKTRFQQAM+RYFMTVPDKWT  +
Sbjct:    1 MEFTGGQPLPLLDHSKAVFQTAIMNDTLFLSLVNVVDYSIVVGLDEDRRELVVGIIDYMRQYDIIKRVERMGKSVSMVVGQAEPTIVQPSMYKTRFQQAMERYFMTVPDKWTNVS 115
[Close]
BLAST of mRNA_L-elsbetiae_contig10795.740.1 vs. uniprot
Match: A0A7S2BAF1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BAF1_9STRA)

HSP 1 Score: 196 bits (499), Expect = 2.150e-57
Identity = 93/119 (78.15%), Postives = 106/119 (89.08%), Query Frame = 1 
Query:    4 VLLDENFMEFTEGQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSIIVGLDEERRELVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAMDRYFMTVPDKWT 360
            VLLD+NFMEFTEG+PLP+ D  K  F+ A+LNDTLFL+I+N+VDYSI+VG+DEE+ ELVVGIIDYMRQYDIIKRMERMGKSV MIAGQAEPTI+QP  Y+ RFQQAM RYFM VPDKWT
Sbjct:  127 VLLDDNFMEFTEGRPLPLHDRAKEYFNKAVLNDTLFLSIINVVDYSILVGMDEEKNELVVGIIDYMRQYDIIKRMERMGKSVGMIAGQAEPTIIQPPAYRNRFQQAMQRYFMMVPDKWT 245
[Close]
BLAST of mRNA_L-elsbetiae_contig10795.740.1 vs. uniprot
Match: F0YGM7_AURAN (PIPK domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGM7_AURAN)

HSP 1 Score: 197 bits (502), Expect = 4.990e-57
Identity = 92/123 (74.80%), Postives = 109/123 (88.62%), Query Frame = 1 
Query:    4 VLLDENFMEFTEGQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSIIVGLDEERRELVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAMDRYFMTVPDKWTGFAM 372
            VLLDENFMEFT G+PLP++D  KA F++A+LNDTLFL+++N+VDYSI+VG+DEE  ELVVGIIDYMRQYDIIK+MERMGKSV MIAGQAEPT++QP  Y+ RFQ AM+RYFM VPDKWT F M
Sbjct:  241 VLLDENFMEFTNGRPLPLRDQAKAYFNSAVLNDTLFLSLINVVDYSILVGMDEENHELVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTVIQPPNYRNRFQAAMERYFMMVPDKWTSFRM 363
[Close]
BLAST of mRNA_L-elsbetiae_contig10795.740.1 vs. uniprot
Match: A0A7S2BNC6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BNC6_9STRA)

HSP 1 Score: 196 bits (498), Expect = 2.620e-53
Identity = 96/137 (70.07%), Postives = 112/137 (81.75%), Query Frame = 1 
Query:    4 VLLDENFMEFTEGQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSIIVGLDEERRELVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAMDRYFMTVPDKWTGFAMSNTVPNFEGVDLEH 414
            VLLD+NFMEFTEG+PLP+ D  K  F+ A+LNDTLFL+I+N+VDYSI+VG+DE   ELVVGIIDYMRQYDIIKRMERMGKSV MIAGQAEPTI+QP  Y+ RFQQAM RYFM VPDKWT F +  T+      D++H
Sbjct:  626 VLLDDNFMEFTEGRPLPLHDRAKEYFNKAVLNDTLFLSIINVVDYSILVGMDEVNNELVVGIIDYMRQYDIIKRMERMGKSVGMIAGQAEPTIIQPPAYRNRFQQAMYRYFMMVPDKWTSFHIPATLST---GDIDH 759
[Close]
BLAST of mRNA_L-elsbetiae_contig10795.740.1 vs. uniprot
Match: A0A7S3HPL1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPL1_9STRA)

HSP 1 Score: 179 bits (454), Expect = 7.550e-52
Identity = 84/119 (70.59%), Postives = 100/119 (84.03%), Query Frame = 1 
Query:    1 QVLLDENFMEFTEGQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSIIVGLDEERRELVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAMDRYFMTVPDKW 357
            QVL+D+N ME T+G+P P++   K  FH A+ NDTLFL+IVN+VDYSI+VG DE   E+VVGIIDYMRQYDIIK+MERMGKSV MIAGQAEPTI+QPS Y+ RF  AM+RYFMT+PDKW
Sbjct:   84 QVLMDDNLMELTKGRPFPLKHRAKLFFHKAVQNDTLFLSIVNVVDYSILVGFDENTHEVVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTIIQPSQYRKRFSLAMERYFMTIPDKW 202
[Close]
BLAST of mRNA_L-elsbetiae_contig10795.740.1 vs. uniprot
Match: A0A7S2HBR3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HBR3_9STRA)

HSP 1 Score: 178 bits (451), Expect = 7.090e-51
Identity = 82/118 (69.49%), Postives = 101/118 (85.59%), Query Frame = 1 
Query:    7 LLDENFMEFTEGQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSIIVGLDEERRELVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAMDRYFMTVPDKWT 360
            LLD +F+EFT G+PLP+ D  KAVFH +ILNDTLFL+I+N++DYSI+VG+DEER ELVVGIID+MRQYDI+K+MER+GKS+ M+ G   PTI+QP LYK RF  AM+RYFMTVP KWT
Sbjct:  128 LLDGDFLEFTAGRPLPLNDRAKAVFHMSILNDTLFLSIINVLDYSILVGIDEERMELVVGIIDFMRQYDILKQMERVGKSLPMVVGSEAPTIIQPPLYKARFTNAMERYFMTVPSKWT 245
[Close]
BLAST of mRNA_L-elsbetiae_contig10795.740.1 vs. uniprot
Match: B8CFF1_THAPS (PIPK domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFF1_THAPS)

HSP 1 Score: 177 bits (450), Expect = 8.150e-50
Identity = 82/118 (69.49%), Postives = 102/118 (86.44%), Query Frame = 1 
Query:    7 LLDENFMEFTEGQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSIIVGLDEERRELVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAMDRYFMTVPDKWT 360
            LLD +F+EFT G+PLP+ D  KAVFH +ILNDTLFL+I+N++DYSI+VG+DEER ELVVGIID+MRQYDI+K+MER+GKS+ M+ G   PTI+QP LYK+RF  AM+RYFMTVP KWT
Sbjct:  203 LLDGDFLEFTGGRPLPLTDRAKAVFHMSILNDTLFLSIINVLDYSILVGIDEERMELVVGIIDFMRQYDILKQMERVGKSLPMVVGSEAPTIIQPPLYKSRFTNAMERYFMTVPSKWT 320
[Close]
BLAST of mRNA_L-elsbetiae_contig10795.740.1 vs. uniprot
Match: A0A7S3YIT9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIT9_HETAK)

HSP 1 Score: 173 bits (438), Expect = 8.690e-50
Identity = 83/139 (59.71%), Postives = 106/139 (76.26%), Query Frame = 1 
Query:    1 QVLLDENFMEFTEGQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSIIVGLDEERRELVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAMDRYFMTVPDKWTGFAMSNTVPNFEGVDLEHP 417
            QVLLD+N ME+TEG+P+P++      FH A  ND+LFL++ N++DYSI+VG+DEER+ELVVGIIDYMRQYDI+K++ER+GKSV MIAGQA PTI+QP  Y+ RF++AM RYFM VPDKW+        P   G  L  P
Sbjct:   38 QVLLDQNLMEWTEGRPVPLRARDHTAFHMAAQNDSLFLSLTNVIDYSILVGIDEERQELVVGIIDYMRQYDILKKVERVGKSVGMIAGQAAPTIIQPPSYRERFREAMSRYFMAVPDKWS--------PGASGFQLAAP 168
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10795.740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Z3_ECTSI1.820e-7794.291-phosphatidylinositol-3-phosphate 5-kinase n=1 Ta... [more]
A0A6H5K771_9PHAE4.560e-7793.57PIPK domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835ZDL9_9STRA5.460e-6082.61PIPK domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2BAF1_9STRA2.150e-5778.15Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
F0YGM7_AURAN4.990e-5774.80PIPK domain-containing protein n=1 Tax=Aureococcus... [more]
A0A7S2BNC6_9STRA2.620e-5370.07Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3HPL1_9STRA7.550e-5270.59Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2HBR3_9STRA7.090e-5169.49Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B8CFF1_THAPS8.150e-5069.49PIPK domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A7S3YIT9_HETAK8.690e-5059.71Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10795contigL-elsbetiae_contig10795:1372..4659 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Seed ortholog evalue1.6e-64
Seed eggNOG ortholog2880.D7G3Z3
KEGG rclassRC00002,RC00078
KEGG koko:K00921
KEGG ReactionR05802,R10951
KEGG Pathwayko00562,ko04070,ko04145,ko04810,map00562,map04070,map04145,map04810
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Translation initiation factor IF-2, N-terminal region
EggNOG OGsCOG5253@1,KOG0230@2759
EC2.7.1.150
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Exons4
Taxonomic scopeEukaryota
Seed ortholog score251.9
Model size984
Cds size399
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10795.740.1prot_L-elsbetiae_contig10795.740.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10795 1396..4098 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815298.4917088-UTR-L-elsbetiae_contig10795:1371..13951622815298.4917088-UTR-L-elsbetiae_contig10795:1371..1395Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10795 1372..1395 +
1691682824.0666192-UTR-L-elsbetiae_contig10795:1371..13951691682824.0666192-UTR-L-elsbetiae_contig10795:1371..1395Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10795 1372..1395 +
1622815298.546013-UTR-L-elsbetiae_contig10795:4098..46591622815298.546013-UTR-L-elsbetiae_contig10795:4098..4659Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10795 4099..4659 +
1691682824.1352406-UTR-L-elsbetiae_contig10795:4098..46591691682824.1352406-UTR-L-elsbetiae_contig10795:4098..4659Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10795 4099..4659 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815298.5069764-CDS-L-elsbetiae_contig10795:1395..14431622815298.5069764-CDS-L-elsbetiae_contig10795:1395..1443Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10795 1396..1443 +
1691682824.0889091-CDS-L-elsbetiae_contig10795:1395..14431691682824.0889091-CDS-L-elsbetiae_contig10795:1395..1443Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10795 1396..1443 +
1622815298.5183358-CDS-L-elsbetiae_contig10795:2513..26181622815298.5183358-CDS-L-elsbetiae_contig10795:2513..2618Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10795 2514..2618 +
1691682824.1028974-CDS-L-elsbetiae_contig10795:2513..26181691682824.1028974-CDS-L-elsbetiae_contig10795:2513..2618Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10795 2514..2618 +
1622815298.5280585-CDS-L-elsbetiae_contig10795:3221..33621622815298.5280585-CDS-L-elsbetiae_contig10795:3221..3362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10795 3222..3362 +
1691682824.1115718-CDS-L-elsbetiae_contig10795:3221..33621691682824.1115718-CDS-L-elsbetiae_contig10795:3221..3362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10795 3222..3362 +
1622815298.5367877-CDS-L-elsbetiae_contig10795:3993..40981622815298.5367877-CDS-L-elsbetiae_contig10795:3993..4098Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10795 3994..4098 +
1691682824.123747-CDS-L-elsbetiae_contig10795:3993..40981691682824.123747-CDS-L-elsbetiae_contig10795:3993..4098Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10795 3994..4098 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10795.740.1

>prot_L-elsbetiae_contig10795.740.1 ID=prot_L-elsbetiae_contig10795.740.1|Name=mRNA_L-elsbetiae_contig10795.740.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=133bp
MEFTEGQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSIIVGLDEERRE
LVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAM
DRYFMTVPDKWTGFAMSNTVPNFEGVDLEHPQ*
back to top

mRNA from alignment at L-elsbetiae_contig10795:1372..4659+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10795.740.1 ID=mRNA_L-elsbetiae_contig10795.740.1|Name=mRNA_L-elsbetiae_contig10795.740.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3288bp|location=Sequence derived from alignment at L-elsbetiae_contig10795:1372..4659+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGCTGCTAGACGAAAACTTCATGGAGTTCACCGAGGGCCAGCCGCT
CCCCATGCAAGACCTAGGAAAGGTATGGAGGTAGCTGTACGGACGTGACT
GCCCGGCTCGTGTGGTTCGGATCTGGGTGGGGACGTGTGTGTTCGGCTCA
AGCACTGCTTGCTGTCTCCGGTTCTCCCGTTGTTTTTTTGTGTGTTCGTG
AAGCCCGCCGCTGTAGTGATGTTTTGTTTATCTCCTCTCTGATGCCTTGG
TTGCCCTGCCGACGAAACGAATGGCAATTGAGTGGCATACGCTGAGGTGT
ATATGGCTCCGTGAGTTGCTACATTTTTTTTACATTAGCAGTGTCGATTA
CACGGATTACGAGCTACTGTGAAGAAACAACAACAACAACAACAACAACA
ACAACAACAACCTACCTGCCCCCAAAGCCTTCATACTAGATTTCACCTTC
GTAGACCAAACCGTCGACTGTGTGGTTAGTTCCGGCTTGATCCTCTGAGC
CGAATCGTCGTTTCGTATACCTACAGAGTGGTTTTTTCTTCGCAGTTTTA
TGTTTTATTTTATTTTTGTTTTCGTGCCCATCCATCTTCTTTCATCTTGA
TTTTCTTGGTCTCCCGTGGCCAGGAAAAACTGCTCTTCAGCTGAAGGTCT
CCGTGGTACATAGTGATACCGTAGGTGACACAAGATACCACACCCCCTGG
ACCGAATTTTAGAGATCGATTACTCCGTAACGAAGGTGCCAGCACCAAAC
GATACATTTTCAGACAGTCCTCGACTAGGGAATCTTTACAACGCCACCCT
ATTTCGGCACTGGCACTCTTCTCGTTGGGGAGGAACCGAGCTTTGAAAAC
CTGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTACTGCTGTATCGA
TGTATTCCAGCCGTTTCGTAATTTGTTTTACACTTTCCGCTTCTGCCCCC
TTTTCTGTTTTGCGTCACCGTGGTGGTGACGCAGTCCGAAGTTTTAAGTT
TTCCCGTCGGTCTGGGCGACGCCGTGTGTTGAGCACACCAGTAGTAGTCA
GGAGTCAAATGTGTCCCCTCCCTCTCACCTCATTTCGTGTTTAATGCTTT
GTTCCTCTGGTCTTTTTGTTTTCGTGCTTGCTCCCCCCGAAGGCCGTCTT
CCACACTGCCATCCTCAACGATACTCTGTTCCTCAACATCGTCAACATTG
TGGACTACAGCATCATCGTCGGCCTGGACGAAGAGAGAAGAGAGCTGGTG
AGGCTGTCTCTTTTGCTGGCTTCTATGTAGTACTGTTATTGTTTGTTTGC
TGAAGTCATTGCTAAAACGTTAGTGCAAAAACGTTATTGCTGGAGACACG
CGGTTCCTCGTTGCTCAGCGCCGCCAGCGCTGTTGACGACCATACCCTCC
TTCGCCGTACATTGGGGTACAGAATGGCTGCATAGACGCCGAGTTGATGA
TTGCTCGATCGAGGGCTTGGATCATGTTCACTCTTCGTTTCTTTGTTTTT
TTTTTTATTATTATTTCAACGCGGTGGGTTTGCCCCCTCCAGTGAGGACC
ACCCCGGACTCGTGCTTTGGACTTCGTTCATCGTGTGGCACGCTGCAAAC
AACGTGTACGTGCTGCTGCTTCAGGAGAGCTGGCGGCCTTTCACTGCATG
CGTTTGTTCGCGCTCAACGATGATGCTTACGCTGCAGCGTGTGCATGCTC
TTGGTTTTAGGAGAGCCGACTTTCACTGCACGCGTTTGTTCGCGCTCAAC
GATTGGGCTTACGCTGCAGCGTGTGCATGCTCTTGGTTTTGGGAGAGCTG
ACTCTCACTGCGCGCATTTTGCTTATGAACAACAAATGTTATATGTTCAG
GTGGTGGGCATCATCGACTACATGAGGCAGTACGATATCATCAAGCGCAT
GGAACGGATGGGTAAGAGCGTGAGCATGATCGCGGGTCAAGCGGAGCCCA
CCATCGTCCAGCCTTCTCTCTACAAAACCCGCTTTCAACAGGTCAGTGAA
TGAGCTAGCTCGCGAGTGAGTGAGGGAGGGAGTGACCGGTTGATGTTGAA
TTTTCTTTGCTCAAAGCGAGGAAGCTTCCGAGCATTCAGATGATTCTGAA
CGGCATGGTGTTTGCTTTACGACGGAGTGACCCGAGGCTCCCTCGTTGAT
GTCGCTTGTTTCCCTCCCTGCTCGAAGCGATAGAGTTTCAATATGTTCAC
GACATAGTGTGGTGTTGCTGTTTTTTTCGCAACGGAGACTGTGCAACGGA
GATTAAGTCCCGAGTTTTGGGGCAAGCGATTACGCCAATCAAACGTCGGT
GTGCCAGAGTTATGTTGTGTGCCCCGGACTTTCTCGCCAGCTGCAGAAAA
AGCTTGGTTCGTGCATGCCTACGTGCGTACCCTGTGAATCCAAGCTGGTG
TCCCGTGTCGTTCCTGCTGCCGCCACCACCACCGTGCATCGCTGTTGGAA
ATCAGCGAACCGTTTCGCGCCCACAGCCCTGCGCTGCTGCGACGAAAATC
GGGCAGATCCCTTTTTGCTTTGTTTTTGCGATGCTCTTGTCCGTTCTGGA
AACTCCACCGCTAAACATGTTCTCCCCCCCGCCCCCCGCTAACGTTCGAC
GGCTCTGATGCTGCTTTTTCAGGCGATGGACCGGTACTTCATGACGGTCC
CAGACAAGTGGACGGGCTTCGCGATGAGCAATACCGTTCCCAACTTTGAG
GGGGTTGATCTCGAGCACCCCCAGTAGTGAGTGTCGGTGTCCTCATTTCG
GTTTCGCCTTGGCGGCGGCGAGTCGCCTCCAGGGTAAAGCAGCACTCTTG
TTGGTGTCCTCGAAGCGCATCTAGACACAAGCTTCCTCGTGGGGGACAGC
CAAGCCGGAAGTTTGGGAAGTACGAAGTAGGTACCGGTACCTGTCGTGTG
TGCGTGTAGTGTGGATGGTGAATGCTGTATTTGTGTGGTGGGTGTTGTGT
ACACCGTCCGGTGAAGTCTGGAGCAATAGCTCGCGGCCTCTTGAGCGTTT
GTTTGTGTTAAGTTAAGTTCATCCTGCCCGATTTTTTGTTTTGCTTCTTC
GGCGGAAACCGCGCTGGTTGGTTGATTTCCCGTGTGGTTCTGTTTTTGGT
GCGGGCTCTTCAGTCATGTAGTACCACGGAGAGCTTGTTTCACCCGCGAC
TTGTTCTACCTGGCTTGTGCGTGTGCGCGTGCATGCGTACGTATATACGC
ACATCCTTTTTTTTTAGCCGAAACACGCCTGTTTTTCCTGTATATCTCTG
TTGCTTCGATCGATGGAGCTCGTTGCTGCTGGCCTACC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig10795:1372..4659+

>mRNA_L-elsbetiae_contig10795.740.1 ID=mRNA_L-elsbetiae_contig10795.740.1|Name=mRNA_L-elsbetiae_contig10795.740.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=798bp|location=Sequence derived from alignment at L-elsbetiae_contig10795:1372..4659+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGTTCACCGAGGGCCAGCCGCTCCCCATGCAAGACCTAGGAAAGAT
GGAGTTCACCGAGGGCCAGCCGCTCCCCATGCAAGACCTAGGAAAGGCCG
TCTTCCACACTGCCATCCTCAACGATACTCTGTTCCTCAACATCGTCAAC
ATTGTGGACTACAGCATCATCGTCGGCCTGGACGAAGAGAGAAGAGAGCT
GGCCGTCTTCCACACTGCCATCCTCAACGATACTCTGTTCCTCAACATCG
TCAACATTGTGGACTACAGCATCATCGTCGGCCTGGACGAAGAGAGAAGA
GAGCTGGTGGTGGGCATCATCGACTACATGAGGCAGTACGATATCATCAA
GCGCATGGAACGGATGGGTAAGAGCGTGAGCATGATCGCGGGTCAAGCGG
AGCCCACCATCGTCCAGCCTTCTCTCTACAAAACCCGCTTTCAACAGGTG
GTGGGCATCATCGACTACATGAGGCAGTACGATATCATCAAGCGCATGGA
ACGGATGGGTAAGAGCGTGAGCATGATCGCGGGTCAAGCGGAGCCCACCA
TCGTCCAGCCTTCTCTCTACAAAACCCGCTTTCAACAGGCGATGGACCGG
TACTTCATGACGGTCCCAGACAAGTGGACGGGCTTCGCGATGAGCAATAC
CGTTCCCAACTTTGAGGGGGTTGATCTCGAGCACCCCCAGTAGGCGATGG
ACCGGTACTTCATGACGGTCCCAGACAAGTGGACGGGCTTCGCGATGAGC
AATACCGTTCCCAACTTTGAGGGGGTTGATCTCGAGCACCCCCAGTAG
back to top