prot_L-elsbetiae_contig1079.735.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1079.735.1
Unique Nameprot_L-elsbetiae_contig1079.735.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1307
Homology
BLAST of mRNA_L-elsbetiae_contig1079.735.1 vs. uniprot
Match: D7G3B8_ECTSI (DNA primase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B8_ECTSI)

HSP 1 Score: 1320 bits (3417), Expect = 0.000e+0
Identity = 854/1212 (70.46%), Postives = 910/1212 (75.08%), Query Frame = 0
Query:  113 RPRGLPPLRAAA-GNGQPSDAAAASAGDAKGWQAGAAGVGTELASGQPRREGVQHGEGG------RKSFG---HITDDTLDLIRASTSITEVIGQHVDMQPAGRGMVGCCPFHEDSNPSFSVDDSRGSYHCFGCGASGDVITFMMKIDGLGFREVVRDLAEEAGISLGFENASDGXXXXXXXXXXRWDTGDEKKRREARERLSLVLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVDAGLAPDTSKWKYPTSSNNPRSRVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPEVPKKGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGYDKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAIRSEDTAFIVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDAAGQRAVERLCESPASSGLDSLSEAGVSVSVATIPGDSGCKDPADFLQAHGADEFRSQVMEGAVPWSDWYGDRILAEHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEVMRHQLEFDLMSMSNEKRARKNALRRRVAGSPAXXXXXXXXXXXXXXXXSLGKREESRLKREKFGNKNSAIWSPSMEQEYGGGSEKSKATELALRGRILDQAQRFLLALVVHDPSRRAKCAEEVSRHGLSLGGERRQWLFDGLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXG---WGGPSAEALEVGGDVLLAEVRAAAPAGYFAPRGTAAGMGGWGXXXXXXXXXXXXKEEGALDWVFERAEADRVAKGSNTDLVLLEVVMVMLKEQAAARMHSLGLELADTSNAIARTMAEAATADLLAV--PASTGPPSXXXXXXXXXXXXXXXXXXTADGDXXXXXXXXXXXXXXXXVERLKARQAELFEMIQEEKEEVTELEAQRKAFTSRLPKVRAETEAIRNQQARSKNLLASATKARAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGG---GELTLEDFPYRFLDEDQEPEEGINIYDVEANIAAARAAKAAGEXXXXXXXXXSGCSGPGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQTERMDEDDGFFESGLMGW 1306
            RPR + PL AAA GN +P DAA A AG  +G Q        ELA+GQPR    Q           RK FG   HITD+TLDLIRASTSITEVIGQHV+M+PAGRGMVGCCPFHED  PSFSVDDSRGSYHCFGCGASGDVITF+M+IDGLGFREVV DLA EAGI LGFENA+DG          +WDT DEK RREARERLSLVLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVDAGL PDTSKWKY  S N+ R RVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIP+V KKGKA           XXXXXXXXXXXX                           +G ++KKARPPAKYLNSPETTLFKKGKNVFGLDLAKEA+RSEDTAF+VEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARY+KSKRV+LCMDGDAAG+RAVERLCESPASSGLDSLSEAGVSVSVATIP D GCKDPADFLQAHGA+EFR++VM  AVPWSDWYGD ILA+HDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNE MRHQLEFDLM+MSNEKRARKNALRRR +G                    + KREESRLKREK+G+K   IWSPSMEQEYGGGSE+SKATELALRGRILDQAQRFLLALVVHDPSRRAKC EEVSRHGL LGGERRQWLF+ LTA+            XXXXXXXX           WGGP+ EALE GGDVL AEVRAAAP GYFA RG AAG GG G            ++E  LDWVFERAEA+RVAKG+NTDLVLLEVVMVMLKEQAAA+MHSL LELADTSNAIARTMAEAATAD LA+  P ++G P                    A G XXXXXXXXXXXXXX  VERLK RQ+ELFEMIQE++EEVTE EA+RKAFT+RLPKVRAETEAIR Q+AR+K                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         XXXX      E GG   GEL++ED PYRFLDED+EPEEGINIYDV+ NIAAA A      XXXXXXXXX    G G                 X                EEQ E+M+EDDG F+    GW
Sbjct:  110 RPRAVAPLSAAAAGNDRPGDAAPA-AGGGRGPQQSRLPQRVELAAGQPRGSVQQRXXXXXXXXXXRKPFGPSRHITDETLDLIRASTSITEVIGQHVEMKPAGRGMVGCCPFHEDRTPSFSVDDSRGSYHCFGCGASGDVITFLMQIDGLGFREVVHDLAVEAGIPLGFENAADGSGGG------KWDTADEKARREARERLSLVLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVDAGLVPDTSKWKYRPSPNDARGRVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPDVSKKGKAKKKGEQTEAAAXXXXXXXXXXXXAGGKGVGEGAD----------------AGKWEKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAMRSEDTAFVVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYTKSKRVILCMDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDPGCKDPADFLQAHGAEEFRAKVMGKAVPWSDWYGDSILADHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDLMNMSNEKRARKNALRRR-SGHYTGSWNAGVNAGSAPPAQGMKKREESRLKREKYGSKRMTIWSPSMEQEYGGGSEESKATELALRGRILDQAQRFLLALVVHDPSRRAKCLEEVSRHGLYLGGERRQWLFNALTASVSPDPALPSAAGXXXXXXXXQDGAGRDSPPAWGGPTPEALEAGGDVLFAEVRAAAPGGYFALRGKAAGKGGGGVGADDEG-----EKEDTLDWVFERAEAERVAKGANTDLVLLEVVMVMLKEQAAAKMHSLSLELADTSNAIARTMAEAATADFLALDPPQASGEPPETATAPESPG--------VAAGKXXXXXXXXXXXXXX--VERLKVRQSELFEMIQEQREEVTEFEARRKAFTNRLPKVRAETEAIRKQEARAKR------------QSMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPADTRYDERXXXXLQQLRREAGGEDEGELSVEDLPYRFLDEDKEPEEGINIYDVDGNIAAAMAXXXXXXXXXXXXXXXXARRGAG-----TPQAVTVMGGGGXDGGLDDAVVERMAREAEEQMEQMNEDDGVFDGSETGW 1265          
BLAST of mRNA_L-elsbetiae_contig1079.735.1 vs. uniprot
Match: A0A6H5K157_9PHAE (Toprim domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K157_9PHAE)

HSP 1 Score: 1215 bits (3143), Expect = 0.000e+0
Identity = 788/1126 (69.98%), Postives = 833/1126 (73.98%), Query Frame = 0
Query:  201 MQPAGRGMVGCCPFHEDSNPSFSVDDSRGSYHCFGCGASGDVITFMMKIDGLGFREVVRDLAEEAGISLGFENASDGXXXXXXXXXXRWDTGDEKKRREARERLSLVLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVDAGLAPDTSKWKYPTSSNNPRSRVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPEVPKKGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------SGGYDKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAIRSEDTAFIVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDAAGQRAVERLCESPASSGLDSLSEAGVSVSVATIPGDSGCKDPADFLQAHGADEFRSQVMEGAVPWSDWYGDRILAEHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEVMRHQLEFDLMSMSNEKRARKNALRRRV------------AGS--PAXXXXXXXXXXXXXXXXS------------------------------------------------------LGKREESRLKREKFGNKNSAIWSPSMEQEYGGGSEKSKATELALRGRILDQAQRFLLALVVHDPSRRAKCAEEVSRHGLSLGGERRQWLFDGLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXX--GWGGPSAEALEVGGDVLLAEVRAAAPAGYFAPRGTAAGMGGWGXXXXXXXXXXXXKEEGALDWVFERAEADRVAKGSNTDLVLLEVVMVMLKEQAAARMHSLGLELADTSNAIARTMAEAATADLLAVPASTGPPSXXXXXXXXXXXXXXXXXXTADGDXXXXXXXXXXXXXXXXVERLKARQAELFEMIQEEKEEVTELEAQRKAFTSRLPKVRAETEAIRNQQARSKNLLASATKARAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGG---GELTLEDFPYRFLDEDQEPEEGINIYDVEANIAAARA 1229
            M+PAGRGMVGCCPFHED  PSFSVDDSRGSYHCFGCGASGDVITF+M+IDGLGFREVV DLA EAGI LGFENA+DG          +WDT DEK RREARERLSLVLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVDAGL PDTSKWKY  S N+ R RVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPEV  KGKA                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                        +G ++KKARPPAKYLNSPETTLFKKGKNVFGLDLAKEA+RSEDTAF+VEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARY+KSKRV+LCMDGDAAG+RAVERLCESPASSGLDSLSEAGVSVSVATIP DSGCKDPADFLQAHGA+EFR++VM+ AVPWS WYGD ILA+HDFA DANAFRRCTDRL GFMSDLSIPTDQTFHVHRFAKALAGGNE MRHQLEFDLM+MSNEKRARKNALRRR             AGS  PA   XXXXXXXXXXXXX                                                       + KREESRLKREK+G+K   IWSPSMEQEYGGGSE+SK TELALRGRILDQAQRFLLALVVHDPSRRAKC EEVSRHGLSLGGERRQWLF+ LTA+            XXXX             GWGGP+ EALE GGDVL AEVRAAAP GYFA RG AAG GG G            + E  LDWVFERAEA+RVAKG+NTDLVLLEVVMVMLKEQAAA+MHSL LELADTSNAIARTMAEAATAD LA+     PP                      G                 V+RLK RQ+ELFEMIQE++EEVTELEA+RKAFT RLPKVRAETEAIR ++AR+K    +A                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                E GG   GEL++ED PYRFLDEDQ+PE+GINIYDVE NIAAA A
Sbjct:    1 MKPAGRGMVGCCPFHEDRTPSFSVDDSRGSYHCFGCGASGDVITFLMQIDGLGFREVVHDLAVEAGIPLGFENAADGSGGG------KWDTADEKARREARERLSLVLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVDAGLVPDTSKWKYRPSPNDARGRVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPEVSNKGKAKKKGEQTEAAAAATGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGKGVGEGAVAGKWEKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAMRSEDTAFVVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYTKSKRVILCMDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDSGCKDPADFLQAHGAEEFRAKVMDKAVPWSVWYGDSILADHDFASDANAFRRCTDRLAGFMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDLMNMSNEKRARKNALRRRSGHYTGSWNAGVNAGSAPPAQGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAAVNGAGGGGYLTGTEGMEGVDVVRDHSWVMERVRMKKREESRLKREKYGSKRMTIWSPSMEQEYGGGSEESKGTELALRGRILDQAQRFLLALVVHDPSRRAKCLEEVSRHGLSLGGERRQWLFNALTASVSPDPALRSAAAXXXXGDEPDGVGCDSPPGWGGPTPEALEAGGDVLFAEVRAAAPGGYFALRGKAAGKGGGGVGADDER-----EREDTLDWVFERAEAERVAKGANTDLVLLEVVMVMLKEQAAAKMHSLSLELADTSNAIARTMAEAATADFLAL----DPPHASAEPPKTAAAPESPGVAAVKGQGVGRSRAEAQAE----VQRLKVRQSELFEMIQEQREEVTELEARRKAFTKRLPKVRAETEAIRKREARAKRQSLAAXXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRYDERGQQQLQQLRREAGGEDGGELSVEDLPYRFLDEDQDPEDGINIYDVEGNIAAAMA 1094          
BLAST of mRNA_L-elsbetiae_contig1079.735.1 vs. uniprot
Match: A0A835YIS2_9STRA (Toprim domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIS2_9STRA)

HSP 1 Score: 389 bits (999), Expect = 6.980e-119
Identity = 243/560 (43.39%), Postives = 303/560 (54.11%), Query Frame = 0
Query:  173 SFGHITDDTLDLIRASTSITEVIGQHVDMQPAGR-GMVGCCPFHEDSNPSFSVDDSRGSYHCFGCGASGDVITFMMKIDGLGFREVVRDLAEEAGISLGFENASDGXXXXXXXXXXRWDTGDEKKRREARERLSLVLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVDAGLAPDTSKWKYPTSSNNPRSRVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPEVPKKGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGYDKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAIRSEDTAFIVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDAAGQRAVERLCESPASSGLDSLSEAGVSVSVATIPGDS-GCKDPADFLQAHGADEFRSQVMEGAVPWSDWYGDRILAEHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEVMRHQLEFDLMSM 730
            SF  I+D +L+ +R +  ++ VIG+HV +  +G   M GCCPFH+D  PS SVDD++G YHCFGCGA GDVI F+M+ + L F    + LAE+ G+ L +E    G                   +   R+RL   LQ+AA+FY R L     AG ARAH+  RG+SP T + FQLGYSPA                    V AGLA + +              +DRFRGRL+VPIRD RG V+ FG R+L                                                              XXXXXXXXXXXX        R   KYLNSPET +F KG  +FGLD A++AIR ED A +VEGYFDVI LH AG+RCAVG LGTA+T  QL L AR+S+ +RVVLCMD DAAG +AVERLCE  A   L+  +  G+ V VA I   + GCKDP+DF+    A         G  PW+ WY DR+LA HD  GDA AFR C D+LT F+S L+ P D+T HV+R A AL+G N  +R QLE DLM+M
Sbjct:    1 SFARISDHSLEALRRTARLSHVIGEHVKLTSSGHTSMKGCCPFHDDKTPSLSVDDAKGLYHCFGCGAGGDVIKFVMETERLSFAAAAKTLAEQHGVQLTYEGGGGGYSADMSEAAQ----AARDAKLAQRDRLLRALQLAAEFYARSLSTARTAGAARAHLASRGVSPATALRFQLGYSPAXXXXXXXXXXXXXXXXXXXXVQAGLAYNNTA---SGGGGGGAPLLDRFRGRLIVPIRDARGAVVAFGGRELPXXXXX--------------------------------------------------------XXXXXXXXXXXXXXXXXXXVRKVPKYLNSPETDVFHKGGMLFGLDAARDAIRDEDMAVLVEGYFDVIALHGAGVRCAVGALGTAVTPRQLDLAARHSRGRRVVLCMDADAAGAKAVERLCEGGA---LEEAAANGIEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKAPWTVWYTDRVLAAHDHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAM 494          
BLAST of mRNA_L-elsbetiae_contig1079.735.1 vs. uniprot
Match: UPI001747370B (DNA primase n=2 Tax=Phormidium tenue TaxID=126344 RepID=UPI001747370B)

HSP 1 Score: 257 bits (657), Expect = 1.190e-69
Identity = 177/555 (31.89%), Postives = 263/555 (47.39%), Query Frame = 0
Query:  180 DTLDLIRASTSITEVIGQHVDMQPAGRGMVGCCPFHEDSNPSFSVDDSRGSYHCFGCGASGDVITFMMKIDGLGFREVVRDLAEEAGISLGFENASDGXXXXXXXXXXRWDTGDEKKRREARERLSL------VLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVDAGLAPDTSKWKYPTSSNNPRSRVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPEVPKKGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGYDKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAIRSEDTAFIVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDAAGQRAVERLCESPASSGLDSLSEAGVSVSVATIPGDSGCKDPADFLQAHGADEFRSQVMEGAVP-WSDWYGDRILAEHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEVMRHQLEFDL 727
            DT++ ++    I +V+ +HV ++  G+   G CPFH+D +PSF+V  S+  Y+CF CGA G+ I F+M+I    F +VV DLA+   +S+                     T +  +R+E + ++SL      VL + A+FY   L +      A AH+ +R + P T+  FQLGY+PA   +     ++Q+ + ++ +  AGL    ++ K            DRFR RL++PI D +G VIGFG R L D Q                                                                                  KYLNSPET LF KGK +F LD A+ AI  +D A +VEGYFD I LH AGI   V  LGTA+++ Q++   RYS+SK+++L  D DAAG +A ER     A    D   +  V + V  IP     KDP +FL++H  D++R+ + +  VP W DW   RILA+ D    A+ F++   ++   + +L   T +T ++HR A+ L+ GN     QLE DL
Sbjct:    9 DTIEDVKQRADIVDVVSEHVVLRKQGKDFAGLCPFHDDKSPSFTVSPSKQFYYCFSCGAGGNTIKFLMEIGKRSFADVVLDLAKRYQVSV--------------------KTLEPAQRQELQRQISLREQLYEVLSLTARFYEHALRQTQGEA-ALAHLQQRQLDPATIQQFQLGYAPAGWQTLHGYLVEQKRYPVELIEKAGLIVPRAEGK---------GYYDRFRDRLIIPIHDLQGRVIGFGGRSLGDEQP---------------------------------------------------------------------------------KYLNSPETELFDKGKTLFALDKARSAIAKQDQAIVVEGYFDAIALHAAGIANVVASLGTALSLHQVRQLLRYSESKQIILNFDADAAGNQAAERAIGEVA----DLAYQGEVQLRVLNIPNG---KDPDEFLRSHSPDDYRALLQD--VPLWLDWQIQRILADADL-DQADQFQQSVAQIVKLLGNLPNATLRTHYIHRCAELLSQGNARQTVQLEADL 442          
BLAST of mRNA_L-elsbetiae_contig1079.735.1 vs. uniprot
Match: UPI00140CE698 (DNA primase n=1 Tax=Aphanocapsa montana TaxID=327565 RepID=UPI00140CE698)

HSP 1 Score: 257 bits (656), Expect = 4.190e-69
Identity = 186/566 (32.86%), Postives = 276/566 (48.76%), Query Frame = 0
Query:  173 SFGHITDDTLDLIRASTSITEVIGQHVDMQPAGRGMVGCCPFHEDSNPSFSVDDSRGSYHCFGCGASGDVITFMMKIDGLGFREVVRDLAEEAGISLGFENASDGXXXXXXXXXXRWDTGDEKKRREARERLSL------VLQMAAQFYTRCLVEMPAAGGARAHII-ERGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVD-AGLAPDTSKWKYPTSSNNPRSRVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPEVPKKGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGYDKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAIRSEDTAFIVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDAAGQRAVERLCESPASSGLDSLSEAG-VSVSVATIPGDSGCKDPADFLQAHGADEFRSQVMEGAVPWSDWYGDRILAEHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEVMRHQLEFDLMS 729
            S   +  DT++ +R +  I +V+ +HV ++  GRG  GCCPFH+D +PSFSV   +  YHCFGCGA G+V  F+M+I    F EVV DLA+   + +                     T ++++R+  + +L+L      VL +A +FY + L + P   GA A+   ERG+S  T++ FQ+GY+P D    L E L Q+     TLV+ AGL                    DRFR RL++PI D +G V+GFG+R L+  +                                                                                  KYLNSPET LF K K +FGLD A+++I  ED A +VEGYFDVI LH AGI  AVG +GTA+T DQ++L  RYS+SK+VVL  D DAAG +A ER     A + ++ L+  G V + +  +P     KD  ++LQA+ AD++ + ++E A  W DW  +  +   D +  A+ F++ +  +   +  L     +T +VH+ A+ L+ G+  M  QLE  L++
Sbjct:    2 SVPRLHPDTIEAVRQAADIVDVVSEHVVLKKQGRGFSGCCPFHDDKSPSFSVSPEKQFYHCFGCGAGGNVFKFLMEIQQRPFAEVVLDLAQRYQVPV--------------------QTLEQEERQSLQRQLTLREQLYDVLALATRFYQQALTQ-PQGKGALAYAQHERGLSQQTLLHFQIGYAP-DGWQTLYEALVQQKRIPATLVEQAGLI---------VPRRQGEGYYDRFRDRLMIPIHDTQGRVVGFGSRTLTGEEP---------------------------------------------------------------------------------KYLNSPETELFNKRKLLFGLDKARKSIVQEDRAIVVEGYFDVIALHAAGIENAVGSMGTALTRDQVRLLLRYSESKQVVLNFDADAAGSKAAER-----AIAEVEDLAYRGDVQLRILNLPNG---KDADEYLQAYSADDYFA-LLEEAPLWVDWQIEAAIRRQDLS-QADQFQQASQDIAAILGKLPNAALRTHYVHQCAQLLSQGDPRMTLQLEEALLT 445          
BLAST of mRNA_L-elsbetiae_contig1079.735.1 vs. uniprot
Match: K9RU56_SYNP3 (DNA primase n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RU56_SYNP3)

HSP 1 Score: 255 bits (651), Expect = 1.800e-68
Identity = 173/555 (31.17%), Postives = 257/555 (46.31%), Query Frame = 0
Query:  180 DTLDLIRASTSITEVIGQHVDMQPAGRGMVGCCPFHEDSNPSFSVDDSRGSYHCFGCGASGDVITFMMKIDGLGFREVVRDLAEEAGISLGFENASDGXXXXXXXXXXRWDTGDEKKRREARERLSL------VLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYSPADLTSPLIEYL-DQEGFEMDTLVDAGLAPDTSKWKYPTSSNNPRSRVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPEVPKKGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGYDKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAIRSEDTAFIVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDAAGQRAVERLCESPASSGLDSLSEAGVSVSVATIPGDSGCKDPADFLQAHGADEFRSQVMEGAVPWSDWYGDRILAEHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEVMRHQLEFDL 727
            DT++ +RA   I EV+ +HV ++  G+  VGCCPFH++ +PSFSV  ++G Y+CFGCGA G+ + F+M++    F EVV DLA+   + +                     T DE +R+  ++ LSL      +L +   FY   L +          + +RG+   T+  FQ+GY+PA     L  YL +Q+G+    +  AGL             N      DRFR RLV+PI D +G V+GFG+R L++ +                                                                                  KYLNSPET LF KGK +FGLD A+  I  +D A +VEGYFDVI LH AGI  AV  LGTA++ +Q++   RY  SK+V+L  D D AG++A +R     A    D      V + + TIP     KDP +FL+ H A ++ + ++  A  W DW    +L  HD +  A+ F+  T ++T  +  L   T ++ ++HR A+ L  G+  +  +LE  L
Sbjct:    9 DTIEQVRARVDIVEVVSEHVALRKRGKDFVGCCPFHDEKSPSFSVSPAKGFYYCFGCGAGGNAVKFLMEVQKRSFGEVVLDLAQRYQVPV--------------------RTVDEHQRQALQQELSLKEQLYEILALTCSFYEHALRQPTGQAALEYAVNKRGLDEATLQQFQIGYAPAGW-QVLYRYLVEQKGYPASLVEQAGLI---------VPRNQGDGYYDRFRDRLVIPIHDPQGRVVGFGSRTLTNEEP---------------------------------------------------------------------------------KYLNSPETPLFSKGKLLFGLDKARHDIAKQDQAIVVEGYFDVIALHRAGITQAVATLGTALSKEQVRQLLRYLDSKQVILNFDADKAGEKAAQRAIGEVA----DLAYSGDVQLRILTIPQG---KDPDEFLRQHSAQDYLN-LVSAAPLWLDWQIQGLLDTHDLS-QADQFQEVTHKITALLGKLPSATLRSHYIHRCAELLGQGDTRLTLRLEESL 443          
BLAST of mRNA_L-elsbetiae_contig1079.735.1 vs. uniprot
Match: A0A2T1D183_9CYAN (DNA primase (Fragment) n=1 Tax=filamentous cyanobacterium CCP2 TaxID=2107700 RepID=A0A2T1D183_9CYAN)

HSP 1 Score: 248 bits (634), Expect = 2.000e-67
Identity = 173/554 (31.23%), Postives = 258/554 (46.57%), Query Frame = 0
Query:  180 DTLDLIRASTSITEVIGQHVDMQPAGRGMVGCCPFHEDSNPSFSVDDSRGSYHCFGCGASGDVITFMMKIDGLGFREVVRDLAEEAGISLGFENASDGXXXXXXXXXXRWDTGDEKKRREARERLSL------VLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVDAGLAPDTSKWKYPTSSNNPRSRVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPEVPKKGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGYDKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAIRSEDTAFIVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDAAGQRAVERLCESPASSGLDSLSEAGVSVSVATIPGDSGCKDPADFLQAHGADEFRSQVMEGAVPWSDWYGDRILAEHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEVMRHQLEFDL 727
            DT+D ++    I +V+ +HV ++  G+  VG CPFH+D +PSFSV   +  Y+CF CGA G+ I F+M++    F +VV DLA    I +                     T +  +R+E + ++SL      VL +A +FY   L +      A  ++  R +S  T+  FQLGY+PA   +     ++Q+ + ++ +  AGL                R   DRFR RL++PI D +G VIGFG R L D Q                                                                                  KYLNSPET LF KGK ++GLD A+ AI  +D A +VEGYFDVI LH AGI  AV  LGTA ++ Q++   RY++SK+V+L  D DAAG +A ER     A    D   +  V + +  IP     KDP +FL+ H  +E+++ ++E A  W DW   ++LA+ D    A+ F++ T  +   + +L   T +T ++H+ A+ L+  N  +  QLE DL
Sbjct:    9 DTIDDVKHRVDIVDVVSEHVVLRKQGKDFVGLCPFHDDKSPSFSVSPGKQFYYCFSCGAGGNSIKFLMELGKRSFADVVLDLARRYQIPV--------------------KTLEPAQRQELQRQISLREQLYEVLALAGRFYEHAL-QQSQGEAALTYLKSRQLSNETIQQFQLGYAPAGWQTLYGYLVEQKRYPVELIEKAGLI---------IPRQGERGYYDRFRDRLMIPIHDLQGRVIGFGGRALGDEQP---------------------------------------------------------------------------------KYLNSPETELFDKGKTLYGLDKARTAIAKQDRAVVVEGYFDVIALHTAGITNAVASLGTAFSLAQVRQLLRYTESKQVILNFDADAAGTKAAERTIGEVA----DLAYQGEVQLRILNIPDG---KDPDEFLRTHSPEEYQT-LLESAPLWLDWQIQQVLAQTDLT-QADQFQQSTQEIAKLLGNLPNATLRTHYIHQCAERLSQNNARLAVQLESDL 442          
BLAST of mRNA_L-elsbetiae_contig1079.735.1 vs. uniprot
Match: A0A8J7JPD4_9CYAN (DNA primase n=1 Tax=Oculatella sp. LEGE 06141 TaxID=1828648 RepID=A0A8J7JPD4_9CYAN)

HSP 1 Score: 250 bits (639), Expect = 3.700e-67
Identity = 173/564 (30.67%), Postives = 264/564 (46.81%), Query Frame = 0
Query:  180 DTLDLIRASTSITEVIGQHVDMQPAGRGMVGCCPFHEDSNPSFSVDDSRGSYHCFGCGASGDVITFMMKIDGLGFREVVRDLAEEAGISLGFENASDGXXXXXXXXXXRWDTGDEKKRREARERLSL------VLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVDAGLAPDTSKWKYPTSSNNPRSRVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPEVPKKGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGYDKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAIRSEDTAFIVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDAAGQRAVERLCESPASSGLDSLSEAGVSVSVATIPGDSGCKDPADFLQAHGADEFRSQVMEGAVPWSDWYGDRILAEHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEVMRHQLEFDLMSMSNEKRAR 737
            DT++ ++    I +V+ ++V ++  G+  VG CPFH+D +PSFSV  S+  Y+CF CGA G+   F+M++    F EVV DLA+   + L                     T +  +R+E + ++SL      +L + A+FY   L +    G  R    +RG+S  T+  FQLGY+PA   +     ++Q+ + ++ +  AGL         P   NN     DRFR RL++PI D +G VIGFG R L D Q                                                                                  KYLNSPET LF KGK +F LD A+ AI  +D A +VEGYFDVI LH AGI   V  LGTA+++ Q++   RY++SK+VVL  D DAAG +A ER     A    D   +  V + + TIP     KDP +FL+ H AD++++ +++ A  W DW    I A+ +    A+ F++ T  +   + D++    +T +V + A+ L+ G+  +   L  +L++    +R R
Sbjct:    9 DTIEQVKQRVDIVDVVSEYVVLRKQGKDFVGLCPFHDDKSPSFSVSPSKQFYYCFSCGAGGNAFKFLMELGKRSFGEVVLDLAKRYQVPL--------------------QTLEPAQRQELQRQISLREQLYEILALTARFYEHALHQATGEGALRYLQADRGLSQATIQQFQLGYAPAGWQTLYGYLIEQKHYPVELVEKAGLV-------VPRQGNN--GYYDRFRDRLMIPIHDLQGRVIGFGGRSLGDEQP---------------------------------------------------------------------------------KYLNSPETELFDKGKTLFALDKARAAIAKQDKAVVVEGYFDVIALHAAGIVNVVASLGTALSLAQVRQLLRYTESKQVVLNFDADAAGTKAAERAIGEVA----DLAYQGAVKLRILTIPEG---KDPDEFLKHHAADDYQA-LLDDAPLWLDWQLQAIFADRNLR-QADQFQQATQDVVKLLGDIANADTRTHYVRQCAELLSNGDSRLVPLLAENLLAQVRRQRRR 453          
BLAST of mRNA_L-elsbetiae_contig1079.735.1 vs. uniprot
Match: A0A8J6SNQ8_9CYAN (DNA primase n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6SNQ8_9CYAN)

HSP 1 Score: 249 bits (636), Expect = 7.180e-67
Identity = 179/557 (32.14%), Postives = 263/557 (47.22%), Query Frame = 0
Query:  180 DTLDLIRASTSITEVIGQHVDMQPAGRGMVGCCPFHEDSNPSFSVDDSRGSYHCFGCGASGDVITFMMKIDGLGFREVVRDLAEEAGISLGFENASDGXXXXXXXXXXRWDTGDEKKRREARERLSL------VLQMAAQFYTRCLVEMPAAGGARAHIIE--RGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVDAGL-APDTSKWKYPTSSNNPRSRVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPEVPKKGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGYDKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAIRSEDTAFIVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDAAGQRAVERLCESPASSGLDSLSEAGVSVSVATIPGDSGCKDPADFLQAHGADEFRSQVMEGAVPWSDWYGDRILAEHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEVMRHQLEFDL 727
            DT++ ++    I +V+ +HV ++  G+   G CPFH+D +PSFSV   +  Y+CF CGA G+ I F+M++    F +VV DLA    +S+                     T +  +R+E + +LSL      +L + A+FY   L +  A G A    +   R +S  T+  FQLGY+PA   +     ++Q+ + ++ +  AGL  P      Y           DRFR RL++PI D +G VIGFG R LSD Q                                                                                  KYLNSPET LF KGK +FGLD A+ AI  +D A +VEGYFDVI LH AGI   V  LGTA+++ Q++L  RY++SK+VVL  D DAAG +A ER     A    D   +  V + V   P     KDP +FLQ+H AD++R+ + E  + W DW   ++LA+ D +  A+ F++ T  +   + +L   T +T ++HR A+ L+ G   +  +LE DL
Sbjct:    9 DTVEQVKQRVDIVDVVSEHVVLRKRGKDFTGLCPFHDDKSPSFSVSPGKQFYYCFSCGAGGNAIKFLMELGKRSFSDVVLDLARRYQVSV--------------------QTLEPAQRQELQRQLSLREQLYEILALTARFYEHALHQ--AQGEAALIYLREARRLSEETIQQFQLGYAPAGWQTLYGYLVEQKHYPVELVEQAGLIVPRQGGGGY----------YDRFRDRLMIPIHDLQGRVIGFGGRTLSDEQP---------------------------------------------------------------------------------KYLNSPETELFDKGKTLFGLDKARGAIAKQDCAVVVEGYFDVIALHAAGINNVVASLGTALSLVQVRLLLRYTESKQVVLNFDADAAGAKAAERAIGEVA----DLAYKGEVQLRVLNTPQG---KDPDEFLQSHSADDYRALLAEAPL-WLDWQIQQLLADADLS-KADQFQQSTQAIVKLLGNLPNATLRTHYIHRCAELLSRGEARLTLRLEEDL 443          
BLAST of mRNA_L-elsbetiae_contig1079.735.1 vs. uniprot
Match: A0A846FA58_9CYAN (DNA primase n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FA58_9CYAN)

HSP 1 Score: 247 bits (631), Expect = 3.800e-66
Identity = 178/554 (32.13%), Postives = 256/554 (46.21%), Query Frame = 0
Query:  180 DTLDLIRASTSITEVIGQHVDMQPAGRGMVGCCPFHEDSNPSFSVDDSRGSYHCFGCGASGDVITFMMKIDGLGFREVVRDLAEEAGISLGFENASDGXXXXXXXXXXRWDTGDEKKRREARERLSL------VLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVDAGLAPDTSKWKYPTSSNNPRSRVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPEVPKKGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGYDKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAIRSEDTAFIVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDAAGQRAVERLCESPASSGLDSLSEAGVSVSVATIPGDSGCKDPADFLQAHGADEFRSQVMEGAVPWSDWYGDRILAEHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEVMRHQLEFDL 727
            DT+D ++    I +V+ +HV ++  G+ +VG CPFH+D +PSFSV  S+  Y+CF CGA G+ I F+M++    F +VV DLA    +S+                     T +  +R+E + +LSL      +L + A+FY   L +            ER +S  T+  FQLGY+P    +     + Q+ +  + +  AGL         P  S +  S  DRFR RL++PI D +G VIGFG R LSD Q                                                                                  KYLNSPET LF KGK +FGL+ AK AI  +D A +VEGYFDVI LH AGI  AV  LGTA +  Q++   RY++SK+V+L  D DAAG +A ER     A    D   +  V + V  IP     KDP +FLQ H + +++ ++++ A  W DW   ++L   D    A+ F++ T  +   +  L   T +T ++HR A  L+ GN  +  QLE DL
Sbjct:    9 DTIDQVKQRADIVDVVSEHVVLRKQGKDLVGLCPFHDDKSPSFSVSPSKQFYYCFSCGAGGNAIKFLMELGKHSFSDVVLDLARRYQVSV--------------------QTLEPAQRQELQRQLSLRDQLYEILALTARFYQHALWQPEGKAAFDYLESERHLSQATIQQFQLGYAPGGWQTLYGYLVAQKHYPTELVEKAGLI-------IPRKSGD--SYYDRFRDRLMIPILDVQGRVIGFGGRTLSDEQP---------------------------------------------------------------------------------KYLNSPETELFDKGKTLFGLNQAKGAIAKQDRAVVVEGYFDVIALHAAGITNAVAALGTAFSAAQVRQLLRYTESKQVILNFDADAAGVKAAERSIGEVA----DLAYQGDVQLRVLNIPAG---KDPDEFLQTHSSADYQ-ELLDAAPLWLDWQIQQLLQGKDLK-QADQFQQSTQAIVKLLGHLPNATLRTHYLHRTADWLSQGNPHLALQLEEDL 443          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1079.735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3B8_ECTSI0.000e+070.46DNA primase n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5K157_9PHAE0.000e+069.98Toprim domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YIS2_9STRA6.980e-11943.39Toprim domain-containing protein (Fragment) n=1 Ta... [more]
UPI001747370B1.190e-6931.89DNA primase n=2 Tax=Phormidium tenue TaxID=126344 ... [more]
UPI00140CE6984.190e-6932.86DNA primase n=1 Tax=Aphanocapsa montana TaxID=3275... [more]
K9RU56_SYNP31.800e-6831.17DNA primase n=1 Tax=Synechococcus sp. (strain ATCC... [more]
A0A2T1D183_9CYAN2.000e-6731.23DNA primase (Fragment) n=1 Tax=filamentous cyanoba... [more]
A0A8J7JPD4_9CYAN3.700e-6730.67DNA primase n=1 Tax=Oculatella sp. LEGE 06141 TaxI... [more]
A0A8J6SNQ8_9CYAN7.180e-6732.14DNA primase n=4 Tax=Cyanobacteria TaxID=1117 RepID... [more]
A0A846FA58_9CYAN3.800e-6632.13DNA primase n=1 Tax=Cyanothece sp. SIO1E1 TaxID=26... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1059..1100
NoneNo IPR availableGENE3D3.40.1360.10coord: 522..656
e-value: 3.6E-35
score: 122.7
NoneNo IPR availablePANTHERPTHR30313DNA PRIMASEcoord: 177..425
coord: 503..1041
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..1306
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..33
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 176..270
NoneNo IPR availableSUPERFAMILY56731DNA primase corecoord: 306..428
NoneNo IPR availableSUPERFAMILY56731DNA primase corecoord: 508..706
IPR002694Zinc finger, CHC2-typeSMARTSM00400primzinc3coord: 208..262
e-value: 1.9E-30
score: 117.1
IPR002694Zinc finger, CHC2-typePFAMPF01807zf-CHC2coord: 178..271
e-value: 2.6E-29
score: 100.9
IPR006171TOPRIM domainSMARTSM00493toprim5coord: 540..613
e-value: 2.6E-11
score: 53.6
IPR006171TOPRIM domainPFAMPF13662Toprim_4coord: 541..625
e-value: 2.6E-16
score: 59.9
IPR006171TOPRIM domainPROSITEPS50880TOPRIMcoord: 540..629
score: 14.671
IPR036977DNA Primase, CHC2-type zinc fingerGENE3D3.90.580.10coord: 175..273
e-value: 1.6E-34
score: 119.6
IPR013264DNA primase, catalytic core, N-terminalPFAMPF08275Toprim_Ncoord: 504..532
e-value: 2.0E-5
score: 24.6
coord: 326..427
e-value: 3.9E-14
score: 52.8
IPR037068DNA primase, catalytic core, N-terminal domain superfamilyGENE3D3.90.980.10coord: 299..430
e-value: 9.8E-23
score: 82.3
IPR030846DNA primase DnaG, bacteriaHAMAPMF_00974DNA_primase_DnaGcoord: 176..861
score: 23.225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1079contigL-elsbetiae_contig1079:11969..26010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1079.735.1mRNA_L-elsbetiae_contig1079.735.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1079 11945..26569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1079.735.1 ID=prot_L-elsbetiae_contig1079.735.1|Name=mRNA_L-elsbetiae_contig1079.735.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1307bp
MNRGGDVRIRVRRSFRAATAAAATYLLATSAEAFLCAPDATGARCRLLHG
TPRHRSSRCALQHDSSSRASPHANSLEGSISRSSSSSSSSSSSSTSRRRR
LPPSRGANSGVRRPRGLPPLRAAAGNGQPSDAAAASAGDAKGWQAGAAGV
GTELASGQPRREGVQHGEGGRKSFGHITDDTLDLIRASTSITEVIGQHVD
MQPAGRGMVGCCPFHEDSNPSFSVDDSRGSYHCFGCGASGDVITFMMKID
GLGFREVVRDLAEEAGISLGFENASDGGGGGSGGGGGRWDTGDEKKRREA
RERLSLVLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYS
PADLTSPLIEYLDQEGFEMDTLVDAGLAPDTSKWKYPTSSNNPRSRVDRF
RGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPEVPKKGKAKGK
GKGKRAGAAAAAAAATDADSAAAAAATGGIGKGASSAAGAEGGGAGASGG
YDKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAIRSEDTAFIVEGYFD
VIKLHDAGIRCAVGVLGTAITIDQLQLCARYSKSKRVVLCMDGDAAGQRA
VERLCESPASSGLDSLSEAGVSVSVATIPGDSGCKDPADFLQAHGADEFR
SQVMEGAVPWSDWYGDRILAEHDFAGDANAFRRCTDRLTGFMSDLSIPTD
QTFHVHRFAKALAGGNEVMRHQLEFDLMSMSNEKRARKNALRRRVAGSPA
SSSPAAPPPPPPPPPPSLGKREESRLKREKFGNKNSAIWSPSMEQEYGGG
SEKSKATELALRGRILDQAQRFLLALVVHDPSRRAKCAEEVSRHGLSLGG
ERRQWLFDGLTAAAAAVSTAAQSPGAAAAAAAAAGPTAAAGWGGPSAEAL
EVGGDVLLAEVRAAAPAGYFAPRGTAAGMGGWGGGGGGGGGGEEDKEEGA
LDWVFERAEADRVAKGSNTDLVLLEVVMVMLKEQAAARMHSLGLELADTS
NAIARTMAEAATADLLAVPASTGPPSPPPAAAAAAAAAAAAGPPTADGDA
EGAAAARSRAEAQAEVERLKARQAELFEMIQEEKEEVTELEAQRKAFTSR
LPKVRAETEAIRNQQARSKNLLASATKARAASSLSSSPPPPPPPPPPSSS
SSPSPSSSAEHFHDERRQQQLQALKHGGSAAAAADDDKEVGGGELTLEDF
PYRFLDEDQEPEEGINIYDVEANIAAARAAKAAGEEAGASPPPGSGCSGP
GFPPPAVTVMGAGGAGGGGGGGDDDAMMERAAREAEEQTERMDEDDGFFE
SGLMGW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002694Znf_CHC2
IPR006171TOPRIM_domain
IPR036977DNA_primase_Znf_CHC2
IPR013264DNA_primase_core_N
IPR037068DNA_primase_core_N_sf
IPR030846DnaG_bac