mRNA_L-elsbetiae_contig1079.734.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1079.734.1 vs. uniprot
Match: D7G3B9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3B9_ECTSI) HSP 1 Score: 1187 bits (3070), Expect = 0.000e+0 Identity = 711/1105 (64.34%), Postives = 794/1105 (71.86%), Query Frame = 1 Query: 1 MGNIESGPEDPLGPVGSLKHRLQSLEETIQSIEVAHQDAQGDHFPEPGAADVCIYGARLFCTPGVQVLTGPVIGEVTGNSAVVLLEVDIVPELGPTARVCCYVSLVDKSCPRGRVIYSTALYLPSRRPRVFKIGGGVSNVIGPGRAYTVCFGGISTEDARSRVGRHVARFRTPHTCFEPNLTVIAVSGDRPDRLAPGEPSLWRVLRERIGAPDAGATNAPGAGEGGGESHLHHRPVDLLLHAGGQSWMADAFEDAWELLKRRAMEPALCADGGWQEAQEEAAERLREAMRRAWNLPDKRAVLASVANLMVCGVADIHPDFEGHLAYLSSVSRGDATASKSSRRAGRGENGGARGSEKERREIRALHAAVRVCRRVFCEYQGQLLWKAAYVGGGWGKGG-QDMAAAFEAEEAGVEEALAETRRVERDVTVKKKKVAMAEEALRRAKAAGSLPAEGGLRAAEERIEQIRKEAKAARAKRVALAKRETPAAAAAVAGRASQGGFLNLGGSIGLALLDTAWSRVSWDGRINRASE------------AAPAAPPLLSPGAWEALELELSRDSELRLLVVVVRHALMGGVEAAPRSVLDQSESSVFDDEIS-----------SLKGSRQPRVASGDRALPLDTGDRDGGSWRDEKDRLLDRLFAWRAGEAWREVVLVCGATEGLGGRGGIRSACELEVLDAKHPGCTIRQIVAGPITDSPHA----TAAAPAAGLHVGRRASRALSEVTTDSSRRFSCRWGPPPADGGLTATGAGFERS-------------------DKSAPIVGAGVGNN-SADPSGDSVGASTSSGRKVNGGGEGGVTQRGKAEAALAPGWDDGSGXXXXXXXXXXXXRTSDLSSGRDDSRASRGLQXXXXXXXXXXXXXXXXXXQAKPVSAGGERSFLEAFLDGGHSPATAVAAGFDPAASARGVAALVVAEAVTVTFVGAMVVLGPVVGRVTQRSAVVLVEVGSTAAVGCVLTDGVTGRQHRQVRLLSPAQPHAFFFETLEESRHYTIVLDGVDNAGARTGAFTTLKAWPDRREPPAVRAAARLSSGGKKSPDAPDIGDDGDD-DPAAVCDVRLLFVSGTGVVSA 3168 MGNIESGPE LG V SLKHRLQSLEETI+SIEVAHQDAQGDHFP PGAAD+C+YGARL CTPGVQVLTGPVIGEVT NSAVVLLEVDI PELGPT+ V C+VS+ + +C GRV++ST L LPSRRPR F+IGGG+S+VIGPGR +TVCFGG+S EDAR RVGR FRTP TCFEP L IAVSGDRPDRLAPGEPSLWRVLRER+ P N PGA G E H H+ P+D++LH GGQ+WMADA EDAWELL+RRAMEP LCADGGW+EAQEEA E LREA+RR+WNLPDKRAVL+SV+NLMVCG AD+HPDFEGHLA +S S A S R G R S KER+E+RALHAAVR CRRVF EYQGQLLWKA GG G G +D+ AFEAEE GVEEALAETRRVERD VK+KKVAMAEEALRRAKAAGSLP EGGLRAAEERI++IRK+ LAKRE PA AAA A RASQGGFLNLGGSIGL LLDT WSRV+WDG+I++A E AAP APPLLSPGAWEALELEL RDSELRLL+VV+RHAL GG P + +S +D++S +L G+ R S + D D G RDE+DRLL+RLFAW+AGEAWREVVLVCGA EG GGRGG+RSACELEVLD+KHPGCTIRQ+VAGPITD+P A T A P GRR SRA E T+ RFS RW P + G +A G G + S DK + G++ SA + G++ S R+ EG V + KA AA APGWDD +G R + + D A R XXXXXXXXXXXXX A PVSA GERSF+EAFLDGGHSP+TAVAAG DPAASARGVAA V A AVTVTFVGA VVLGPVVGRVTQRSAVVLVEVGSTAAVGCVLTDG TG QH+QV LL P QPHAFFF+TLEESRHY+I L+GVDN ARTGAFTTLKAWPDRREPPA+RAA RLS G GDD + + CDVRLLFVSGTG+ SA Sbjct: 1 MGNIESGPEGSLGAVDSLKHRLQSLEETIRSIEVAHQDAQGDHFPAPGAADMCLYGARLVCTPGVQVLTGPVIGEVTENSAVVLLEVDIAPELGPTSPVTCHVSVSEGACRGGRVVHSTTLTLPSRRPRAFRIGGGISSVIGPGRVFTVCFGGVSAEDARFRVGR----FRTPGTCFEPCLGAIAVSGDRPDRLAPGEPSLWRVLRERVAVPSIVPGNVPGASGEGKEGHQHYFPIDVVLHTGGQAWMADALEDAWELLRRRAMEPVLCADGGWREAQEEADECLREAIRRSWNLPDKRAVLSSVSNLMVCGAADLHPDFEGHLARVSLKSGDGVNAGMGSTRRGMRST---RASGKERQEVRALHAAVRACRRVFSEYQGQLLWKALSKGGVRGGGDMEDLTPAFEAEEKGVEEALAETRRVERDEAVKQKKVAMAEEALRRAKAAGSLPTEGGLRAAEERIDKIRKQXXXXXXXXXXLAKREVPAVAAAAATRASQGGFLNLGGSIGLVLLDTVWSRVTWDGKIHQAGENSPHGVDGGGTAAAPEAPPLLSPGAWEALELELGRDSELRLLIVVMRHALAGGT---PHTTARFPSASSGNDQVSGNAKADGSGRSNLDGNPPSRSNSASISAS-DVADDTGSGGRDERDRLLERLFAWKAGEAWREVVLVCGAAEGRGGRGGLRSACELEVLDSKHPGCTIRQVVAGPITDTPGAPPRVTPATP--DPTNGRRGSRAPPEATSVGGGRFSYRWSHPGSASGGSAAGDGNDDSGPKGTALSXXXXXXXXXXXDKVNAVTAGSFGDDVSAITTAPGAGSARPSSRQSKLDDEGPVLPQAKAVAAAAPGWDDDAGGASGTPDSRQSSRPATAADA--DGTAPR------QSXXXXXXXXXXXXXXAAPVSAHGERSFIEAFLDGGHSPSTAVAAGMDPAASARGVAASVTARAVTVTFVGAAVVLGPVVGRVTQRSAVVLVEVGSTAAVGCVLTDGATGWQHKQVHLLYPRQPHAFFFDTLEESRHYSIFLEGVDNGDARTGAFTTLKAWPDRREPPALRAAVRLSGNG---------GDDXXXYEQSQSCDVRLLFVSGTGLASA 1075
BLAST of mRNA_L-elsbetiae_contig1079.734.1 vs. uniprot
Match: A0A836CLN7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLN7_9STRA) HSP 1 Score: 308 bits (790), Expect = 1.470e-83 Identity = 258/723 (35.68%), Postives = 360/723 (49.79%), Query Frame = 1 Query: 1 MGNIES-GPEDPLGPVGS-------LKHRLQSLEETIQSIEVAHQDAQGDHFPE-PGAADVCIYGARLFCTPGVQVLTGPVIGEVTGNSAVVLLEVDIVPELGPTARVCCYVSLVDKSCPRGRVIYSTALYLPSRRPRVFKIGGGVSN--VIGPGRAYTVCFGGISTEDARSRVGRHVARFRTPHTCFEPNLTVIAVSGDRPDRLAPGEPSLWRVLRERIGAPDAGATNAPGAGEGGGESHLHHRPVDLLLHAGGQSWMADAFEDA----WELLKRRAMEPALCADGGWQEAQEEAAERLREAMRRAWNLPDKRAVLASVANLMVCGVADIHPDFEGHLAYLSSVSRGDATASKSSRRAGRGENGGARGSEKERREIRALHAAVRVCRRVFCEYQGQLLWK-----AAYVGGGWGKGGQDMAAAFEAEEAGVEEALAETRRVERDVTVKKKKVAMAEEALRRAKAAGSLPAEGGLRAAEERIEQIRKEAKAARAKRVALAKRETPAAAAAVAGRASQGGFLNLGGSIGLALLDTAWSRVSWDGRINRAS----------EAAPAAPPLLSPGAWEALELELSRDSELRLLVVVVRHALMGGVEAAPRSVLDQSESSVFDDEISSLKGSRQPRVASGDRALPLDTGDRDGGSWR-DEKDRLLDRLFAWRAGEAWREVVLVCGATEGLGGRGGIRSACELEVLDAKHP-GCTIRQIVAGPITDSP 2073 MG ES G +D L GS L +RL++LE ++ +E A+++ Q P PG ++ ++GA L C P V VLTGPV+G+VT + V LLEV++ P G A + ++ V + P GRV+ S L + + RP F+ G G S+ + P Y V F G+ DAR+ V A F TP L +A+S D P LAPGEP+LW L +R+ DA + VD++LH GGQ +A FE WE +RRA A ADG W A+ EAAERLR A RRAW LP KR VLA+ +NLM+ G D+H + G + + ++ A+G E+ R+E+ L+A VR RRVF EYQGQLLW AA G G D+ ++A VE AL R + + ++ AE A+ + +A+G G +A E+ + ++R + AARA AL E AA V ++GG + ++ + LLDT WSRV WDG + +A A P ++P AW LE ELS DS+LRL++V + L GG + S GS S ALP G+ GG+ + +E+ RL D L W+A E WREVVL+CG G GI + CE+ + P G T+RQ+V GP+T +P Sbjct: 1 MGAAESSGADDDLRFEGSFFNGENALCNRLRTLEASLAGVETAYREVQQQQQPAIPGDRELHMHGAALTCDPDVSVLTGPVVGQVTLSGVVCLLEVEVAPRTGSAATITGHLCEVPRGSPHGRVVASVTLQVTTGRPVAFRFGSGSSDQETLCPSGHYKVIFSGLRASDARACV----ASFHTPALADLQRLRCVALSNDDPQALAPGEPTLWSHLADRL-RHDATS-------------------VDVVLHLGGQVPIAATFESCLLMLWEAHRRRA---ATGADG-WDAARAEAAERLRGAYRRAWALPHKRHVLANASNLMLAGEGDVHAELWGGVGVPACLAH-------------------AQGDEEGRQEV--LNALVRATRRVFHEYQGQLLWTPGATAAAAAAGDCASGSADLD-----DDAAVEAALEGEADARRVLLTAQLRLKAAETAVTQIRASGEDLGAAGAQALEDHVSRVRGDCAAARA---AL---EAARDAARVPPAHAEGGLAHPHPAVAVVLLDTVWSRVRWDGAVCSGGGGXXXDGGDGDAYGDALPCVAPDAWLQLERELSTDSDLRLVIVACQVPLAGGFNSG------------------SDGGSAVADPWSTPTALPQ--GEEGGGAVQVEERTRLFDLLSRWKAAERWREVVLLCG-----GSTSGIGAGCEVALTRQSPPAGVTLRQLVTGPVTGAP 638
BLAST of mRNA_L-elsbetiae_contig1079.734.1 vs. uniprot
Match: A0A7S2WI32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WI32_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.170e-33 Identity = 152/479 (31.73%), Postives = 206/479 (43.01%), Query Frame = 1 Query: 274 ELGPTARVCCYVSLVDKSCPRGRVIYSTALYLPSRRPRVFKIGGGVSNVIGPGRAYTVCFGGISTEDARSRVGRHVARFRTPHTCFEPNLTVIAVSGDRPDRLAPGEPSLWRVLRERIGAPDAGATNAPGAGEGGGESHLHHRPVDLLLHAGGQSWMADAFEDAWELLKRRAMEPAL-CADGGWQEAQEEAAERLREAMRRAWNLPDKRAVLASVANLMVCGVADIHPDFEGHLAYLSSVSRGDATASKSSRRAGRGENGGARGSEKERREIRALHAAVRVCRRVFCEYQGQLLWKAAYVGGGWGKGGQDMAAAFEAEEAGVEEAL-AETRRVERDVTVKKKKVAMAEEALRRAKAAGSLPAEGGL-----RAAEERIEQIRKEAKAARAKRVALAKRETPAAAAAVAGRASQGGFLNLGGSIGLALLDTAWSRVSWDGRINRASEAAPAAPPLLSPGAWEALELELSRDSELRLLVVV 1689 E+ A V C++ LVD+SCPRGR + S AL LP R PRVF V PG Y F G+ EDA SRV A F T + + VS DRP L GE +LW L +R+ P H V ++LHAG Q + AFE AW LLKR+A A G W +++A E LR A R AWNLP R VLA +LM+ D+ P+ + RG A +R+ RRV EYQ QL W + A + E A AL A RR R E+AL RA+A E G+ + AEE + +K A+A+ AL+ A A R + + +G+ L+DT ++ + DG +R + ++P L+S G WE L+ L +DS +++LVVV Sbjct: 2 EVDAAADVTCHLCLVDESCPRGREVASQALRLPPRAPRVFSFQDLV-----PGEHYVASFSGVHREDATSRV----ADFFTVDDASG-EVRFLGVSSDRPQALQGGEFNLWETLSDRLRQP-------------------HLPRVSVMLHAGCQVHLEQAFEAAWVLLKRQAETDATGLQPGAWARIEDQALETLRSAYRFAWNLPTTRQVLAMAPHLMLPSDQDVFPNLALAPELDPAEDRGGMVAG----------------------------VVLRLARRVTWEYQRQL----------WDDRVDALLQAEDEEAARFSHALEARMRRQAR------------EDALARAEAEAGALREAGMGESTIQRAEETVTSRKKAFLEAQAEEAALSASSAEQEAQVAAARGCDSALVEVTDRVGVLLVDTVFACLEPDG--SRRTVSSPQKQTLVSEGLWELLQAVLEKDSTVQVLVVV 399
BLAST of mRNA_L-elsbetiae_contig1079.734.1 vs. uniprot
Match: A0A7S3XRR2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRR2_HETAK) HSP 1 Score: 95.1 bits (235), Expect = 4.140e-16 Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 1 Query: 2731 GAMVVLGPVVGRVTQRSAVVLVEVGSTAAVGCVLTDGVTGRQHRQVRLLSPAQPHAFFFETLEESRHYTIVLDGVDNAGARTGAFTT 2991 G V LGPVVGRVT +AVVL+EV TAAV CV+T+ + GR HRQ R L +P AF F L+ RH+T+ L+GV++AG RTG FTT Sbjct: 259 GVRVALGPVVGRVTNTTAVVLLEVDHTAAVTCVVTESLGGRVHRQTRRLRRLRPTAFRFLGLQPGRHHTLRLEGVEDAGGRTGGFTT 345
BLAST of mRNA_L-elsbetiae_contig1079.734.1 vs. uniprot
Match: F0Y511_AURAN (FYVE-type domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y511_AURAN) HSP 1 Score: 88.2 bits (217), Expect = 8.840e-14 Identity = 48/120 (40.00%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 2704 AEAVTVTFVGAMVVLGPVVGRVTQRSAVVLVEVGSTAAVGCVLTDGVTGRQHRQVRLLSPAQPHAFFFETLEESRHYTIVLDGVDNAGARTGAFTTLKAWPDRREPPAVRAAARLSSGGK 3063 AE+ ++ + G +LGPV+GRV RSA++L EV A + CV+T+ +TGR H+Q+ L+ + HAF F+ LE +R+Y + DG+++ RTG+FTT P R PA G K Sbjct: 657 AESQSLFYGGVRCLLGPVIGRVNDRSAIILCEVEYPAPIACVVTESLTGRVHKQIVYLAGKRVHAFRFDDLEAARYYAVHFDGIEDPKYRTGSFTT----PARINDPAQAEETTSEEGSK 772
BLAST of mRNA_L-elsbetiae_contig1079.734.1 vs. uniprot
Match: A0A6S8VRX3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8VRX3_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.030e-10 Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 2704 AEAVTVTFVGAMVVLGPVVGRVTQRSAVVLVEVGSTAAVGCVLTDGVTGRQHRQVRLLSPAQPHAFFFETLEESRHYTIVLDGVDNAGARTGAFTTLKAWPDRREP 3021 A+ ++ F G V +GPV+G VT+ +A++L+EV A VGCV+TD ++G + + L +PHAF E L+ RHY + DGV++ R G+FTT + R P Sbjct: 847 ADICSLFFGGVKVTVGPVIGLVTESTAIILLEVEWEAPVGCVVTDALSGERMTILNHLPKLRPHAFRVEGLKPHRHYHVRFDGVEDPEKRRGSFTTCASLAAPRRP 952
BLAST of mRNA_L-elsbetiae_contig1079.734.1 vs. uniprot
Match: A0A7S3ZY74_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZY74_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.140e-10 Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 2704 AEAVTVTFVGAMVVLGPVVGRVTQRSAVVLVEVGSTAAVGCVLTDGVTGRQHRQVRLLSPAQPHAFFFETLEESRHYTIVLDGVDNAGARTGAFTTLKAWPDRREP 3021 A+ ++ F G V +GPV+G VT+ +A++L+EV A VGCV+TD ++G + + L +PHAF E L+ RHY + DGV++ R G+FTT + R P Sbjct: 847 ADICSLFFGGVKVTVGPVIGLVTESTAIILLEVEWEAPVGCVVTDALSGERMTILNHLPKLRPHAFRVEGLKPHRHYHVRFDGVEDPEKRRGSFTTCASLAAPRRP 952
BLAST of mRNA_L-elsbetiae_contig1079.734.1 vs. uniprot
Match: A0A7S1TX46_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX46_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 3.590e-7 Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 2731 GAMVVLGPVVGRVTQRSAVVLVEVGSTAAVGCVLTDGVTGRQHRQVRLLSPAQPHAFFFETLEESRHYTIVLDGV--DNAGARTGAFTT 2991 GA V+LGPV+GRVT RSA +L+EV S + CVLTDG++GR+ Q + +P L+ R+Y + G+ + TG+FTT Sbjct: 32 GARVLLGPVIGRVTPRSANILMEVASACTLVCVLTDGLSGREITQTVKMPSKRPKLIHMSHLQPGRYYLLTFRGLTPQHTVECTGSFTT 120
BLAST of mRNA_L-elsbetiae_contig1079.734.1 vs. uniprot
Match: A0A7S1TYY6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYY6_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 4.150e-7 Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 2731 GAMVVLGPVVGRVTQRSAVVLVEVGSTAAVGCVLTDGVTGRQHRQVRLLSPAQPHAFFFETLEESRHYTIVLDGV--DNAGARTGAFTT 2991 GA V+LGPV+GRVT RSA +L+EV S + CVLTDG++GR+ Q + +P L+ R+Y + G+ + TG+FTT Sbjct: 799 GARVLLGPVIGRVTPRSANILMEVASACTLVCVLTDGLSGREITQTVKMPSKRPKLIHMSHLQPGRYYLLTFRGLTPQHTVECTGSFTT 887
BLAST of mRNA_L-elsbetiae_contig1079.734.1 vs. uniprot
Match: A0A7S2S3B1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3B1_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 8.840e-6 Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = 1 Query: 1 MGNIESGPEDPLGPVGSLKHRLQSLEETIQSIEVAHQ----DAQGDHFPEP------------GAADVCIYGARLFCTPGVQVLTGPVIGEVTGNSAVVLLEV 261 MGN+E + L +L LE + SI++ H+ DA+ D +P G V + G+RL C V+VLTGPV+G+VTG +A +L+EV Sbjct: 5 MGNVEGS--QAFTGIDELTSQLSRLERRLTSIQIGHEQALRDAELDFACQPAPGGLRVTEASAGGGMVAVSGSRLRCNGSVRVLTGPVLGKVTGTTARILVEV 105 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1079.734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1079.734.1 >prot_L-elsbetiae_contig1079.734.1 ID=prot_L-elsbetiae_contig1079.734.1|Name=mRNA_L-elsbetiae_contig1079.734.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1108bp MGNIESGPEDPLGPVGSLKHRLQSLEETIQSIEVAHQDAQGDHFPEPGAAback to top mRNA from alignment at L-elsbetiae_contig1079:1537..11543- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1079.734.1 ID=mRNA_L-elsbetiae_contig1079.734.1|Name=mRNA_L-elsbetiae_contig1079.734.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10007bp|location=Sequence derived from alignment at L-elsbetiae_contig1079:1537..11543- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1079:1537..11543- >mRNA_L-elsbetiae_contig1079.734.1 ID=mRNA_L-elsbetiae_contig1079.734.1|Name=mRNA_L-elsbetiae_contig1079.734.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=6648bp|location=Sequence derived from alignment at L-elsbetiae_contig1079:1537..11543- (Laminarionema elsbetiae ELsaHSoW15)back to top |