mRNA_L-elsbetiae_contig1077.717.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1077.717.1 vs. uniprot
Match: A0A6H5KXD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXD4_9PHAE) HSP 1 Score: 234 bits (598), Expect = 2.710e-69 Identity = 115/117 (98.29%), Postives = 116/117 (99.15%), Query Frame = 2 Query: 2 MEYEHQYDLAKLSLKNIANTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQTILDGHLQHFDAEIAGQSSNMIKAALGLHSQVAANFRKTATNFHYEFNIRHLSNVF 352 MEYEHQYDLAKLSLKNIANTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQTILDGHLQHFD EIAGQSSNMIKAALGLH+QVAANFRKTATNFHYEFNIRHLSNVF Sbjct: 1884 MEYEHQYDLAKLSLKNIANTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQTILDGHLQHFDPEIAGQSSNMIKAALGLHNQVAANFRKTATNFHYEFNIRHLSNVF 2000
BLAST of mRNA_L-elsbetiae_contig1077.717.1 vs. uniprot
Match: D7FRX0_ECTSI (Dynein heavy chain family dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX0_ECTSI) HSP 1 Score: 234 bits (598), Expect = 2.710e-69 Identity = 115/117 (98.29%), Postives = 116/117 (99.15%), Query Frame = 2 Query: 2 MEYEHQYDLAKLSLKNIANTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQTILDGHLQHFDAEIAGQSSNMIKAALGLHSQVAANFRKTATNFHYEFNIRHLSNVF 352 MEYEHQYDLAKLSLKNIANTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQTILDGHLQHFD EIAGQSSNMIKAALGLH+QVAANFRKTATNFHYEFNIRHLSNVF Sbjct: 1869 MEYEHQYDLAKLSLKNIANTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQTILDGHLQHFDPEIAGQSSNMIKAALGLHNQVAANFRKTATNFHYEFNIRHLSNVF 1985
BLAST of mRNA_L-elsbetiae_contig1077.717.1 vs. uniprot
Match: A0A836CGE4_9STRA (Dynein heavy chain family dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGE4_9STRA) HSP 1 Score: 216 bits (549), Expect = 1.080e-62 Identity = 105/117 (89.74%), Postives = 109/117 (93.16%), Query Frame = 2 Query: 2 MEYEHQYDLAKLSLKNIANTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQTILDGHLQHFDAEIAGQSSNMIKAALGLHSQVAANFRKTATNFHYEFNIRHLSNVF 352 MEY H YDLAKL+LKNI+NTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQT LDGHL+HFDAEIA Q S +IKAALGLHSQVA FRKTATNFHYEFNIRHLSNVF Sbjct: 1952 MEYAHTYDLAKLTLKNISNTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQTFLDGHLKHFDAEIAAQGSTLIKAALGLHSQVAGAFRKTATNFHYEFNIRHLSNVF 2068
BLAST of mRNA_L-elsbetiae_contig1077.717.1 vs. uniprot
Match: B5YNU5_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNU5_THAPS) HSP 1 Score: 191 bits (486), Expect = 3.270e-54 Identity = 90/117 (76.92%), Postives = 104/117 (88.89%), Query Frame = 2 Query: 2 MEYEHQYDLAKLSLKNIANTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQTILDGHLQHFDAEIAGQSSNMIKAALGLHSQVAANFRKTATNFHYEFNIRHLSNVF 352 MEYEH Y+L K++L+NIANTQVV+CMNPTAG F +NPRLQRWFATFA+GLPG TSLLTIYQT LDGHLQ+F +I QS N+IKAALGLHS V++ FRKTATNFHYEFN+RH+SNVF Sbjct: 1294 MEYEHCYELQKMTLRNIANTQVVSCMNPTAGCFNINPRLQRWFATFALGLPGSTSLLTIYQTFLDGHLQNFTDDIKSQSINLIKAALGLHSLVSSTFRKTATNFHYEFNVRHISNVF 1410
BLAST of mRNA_L-elsbetiae_contig1077.717.1 vs. uniprot
Match: A0A4D9CXY3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXY3_9STRA) HSP 1 Score: 188 bits (478), Expect = 3.940e-53 Identity = 90/117 (76.92%), Postives = 100/117 (85.47%), Query Frame = 2 Query: 2 MEYEHQYDLAKLSLKNIANTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQTILDGHLQHFDAEIAGQSSNMIKAALGLHSQVAANFRKTATNFHYEFNIRHLSNVF 352 +EY H YD++KL K I TQVVAC+NPTAGSF VNPRLQRWF+TFA+GLPGPTSLLTIYQT LDGHLQ+FD++I Q SN+IKAA GLH QVA FRKTA NFHYEFNIRHLSNVF Sbjct: 2155 VEYGHVYDMSKLQQKQILKTQVVACLNPTAGSFHVNPRLQRWFSTFAVGLPGPTSLLTIYQTFLDGHLQYFDSDIKAQGSNIIKAAYGLHQQVANAFRKTAKNFHYEFNIRHLSNVF 2271
BLAST of mRNA_L-elsbetiae_contig1077.717.1 vs. uniprot
Match: A0A7S2QUS9_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUS9_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.000e-52 Identity = 89/119 (74.79%), Postives = 104/119 (87.39%), Query Frame = 2 Query: 2 MEYEHQYDLAKLSLKNIANTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQTILDGHLQH--FDAEIAGQSSNMIKAALGLHSQVAANFRKTATNFHYEFNIRHLSNVF 352 MEYEH Y+L K++LKNI+NTQVV+C+NPTAGS +VNPRLQRWFA FAIGLPGPTSLLTIYQT LDGH + F+ EI QS+N+IKAA+GLHS V++ FRKTA NFHYEFNIRH+SNVF Sbjct: 2078 MEYEHMYELGKMTLKNISNTQVVSCLNPTAGSMVVNPRLQRWFAVFAIGLPGPTSLLTIYQTFLDGHFKTSGFEDEIKKQSNNLIKAAMGLHSMVSSTFRKTAANFHYEFNIRHISNVF 2196
BLAST of mRNA_L-elsbetiae_contig1077.717.1 vs. uniprot
Match: A0A7S3XWP9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWP9_HETAK) HSP 1 Score: 177 bits (450), Expect = 2.300e-49 Identity = 87/117 (74.36%), Postives = 98/117 (83.76%), Query Frame = 2 Query: 2 MEYEHQYDLAKLSLKNIANTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQTILDGHLQHFDAEIAGQSSNMIKAALGLHSQVAANFRKTATNFHYEFNIRHLSNVF 352 MEY H YDL K+ ++NIANTQVVA MNPTAGSF +NPRLQR F TFAIG+PG TSLLTIYQT LDGHL++F+ E+AG SS +IKAAL LH V+ NFRKTA FHYEFNIRHLSNVF Sbjct: 279 MEYRHVYDLVKMGVRNIANTQVVASMNPTAGSFQINPRLQRNFTTFAIGMPGQTSLLTIYQTFLDGHLKNFEEEVAGLSSALIKAALTLHQLVSQNFRKTAREFHYEFNIRHLSNVF 395
BLAST of mRNA_L-elsbetiae_contig1077.717.1 vs. uniprot
Match: A0A7S0SR58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR58_9STRA) HSP 1 Score: 171 bits (432), Expect = 6.070e-47 Identity = 78/117 (66.67%), Postives = 96/117 (82.05%), Query Frame = 2 Query: 2 MEYEHQYDLAKLSLKNIANTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQTILDGHLQHFDAEIAGQSSNMIKAALGLHSQVAANFRKTATNFHYEFNIRHLSNVF 352 +EYEH YDL+KL++KNI+NTQ +ACMNPTAGSF +NPRLQRWFATFAIGLP SL TIY T L GHL+HFD E+ + ++++ A+ LH ++ NFRKTA NFHYEFNIRH+SNVF Sbjct: 1233 IEYEHVYDLSKLTVKNISNTQFIACMNPTAGSFEINPRLQRWFATFAIGLPDTISLHTIYLTFLSGHLKHFDDEVQVVAKDLVRVAVSLHREIMNNFRKTAQNFHYEFNIRHISNVF 1349
BLAST of mRNA_L-elsbetiae_contig1077.717.1 vs. uniprot
Match: A0A482RXR9_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXR9_9ARCH) HSP 1 Score: 168 bits (426), Expect = 3.970e-46 Identity = 79/117 (67.52%), Postives = 95/117 (81.20%), Query Frame = 2 Query: 2 MEYEHQYDLAKLSLKNIANTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQTILDGHLQHFDAEIAGQSSNMIKAALGLHSQVAANFRKTATNFHYEFNIRHLSNVF 352 +EYEH YDL+KL++KNI NTQ+VACMNPTAGSF +NPRLQRWFATFAIGLP SL TIY T L GHL+ FD E+ + ++++ A+ LH +V NFRKTA NFHYEFNIRH+SNVF Sbjct: 522 LEYEHVYDLSKLTVKNIGNTQLVACMNPTAGSFEINPRLQRWFATFAIGLPETMSLHTIYLTFLTGHLKKFDEEVQTIARDLVRCAVSLHREVMMNFRKTAQNFHYEFNIRHISNVF 638
BLAST of mRNA_L-elsbetiae_contig1077.717.1 vs. uniprot
Match: A0A067D526_SAPPC (IPT/TIG domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D526_SAPPC) HSP 1 Score: 166 bits (419), Expect = 3.490e-45 Identity = 78/117 (66.67%), Postives = 94/117 (80.34%), Query Frame = 2 Query: 2 MEYEHQYDLAKLSLKNIANTQVVACMNPTAGSFLVNPRLQRWFATFAIGLPGPTSLLTIYQTILDGHLQHFDAEIAGQSSNMIKAALGLHSQVAANFRKTATNFHYEFNIRHLSNVF 352 ++YEH YD +K SLK++ + Q VACMNP+AGSFL+NPRLQR F TFAI LP PT+L+TIYQT LDGHL F +I + ++KAAL LHSQVAA FRKTA NFHYEFN+RH+SNVF Sbjct: 2035 LDYEHWYDRSKFSLKHLVDCQFVACMNPSAGSFLINPRLQRHFVTFAIALPSPTNLVTIYQTFLDGHLADFTDDIKRLAGTLLKAALALHSQVAATFRKTAANFHYEFNLRHISNVF 2151 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1077.717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1077.717.1 >prot_L-elsbetiae_contig1077.717.1 ID=prot_L-elsbetiae_contig1077.717.1|Name=mRNA_L-elsbetiae_contig1077.717.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=117bp MEYEHQYDLAKLSLKNIANTQVVACMNPTAGSFLVNPRLQRWFATFAIGLback to top mRNA from alignment at L-elsbetiae_contig1077:22898..23979- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1077.717.1 ID=mRNA_L-elsbetiae_contig1077.717.1|Name=mRNA_L-elsbetiae_contig1077.717.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1082bp|location=Sequence derived from alignment at L-elsbetiae_contig1077:22898..23979- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1077:22898..23979- >mRNA_L-elsbetiae_contig1077.717.1 ID=mRNA_L-elsbetiae_contig1077.717.1|Name=mRNA_L-elsbetiae_contig1077.717.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=702bp|location=Sequence derived from alignment at L-elsbetiae_contig1077:22898..23979- (Laminarionema elsbetiae ELsaHSoW15)back to top |