prot_L-elsbetiae_contig10024.71.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10024.71.1
Unique Nameprot_L-elsbetiae_contig10024.71.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length180
Homology
BLAST of mRNA_L-elsbetiae_contig10024.71.1 vs. uniprot
Match: A0A6H5JXZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ5_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 8.480e-36
Identity = 68/153 (44.44%), Postives = 97/153 (63.40%), Query Frame = 0
Query:   28 FEVGNHDWPCLDAINCPSGFLKLRNRKSDGKPYVTCDHNSWRDSSTCKVALSMLNASKDHPHPCQLCLQDVGGSPSIGNPTDEKDDRGYTIWENFHGVFSHCAGAKTADGKTFKNATPASGDVVGKGCLCWDGKKNVAKDINLGCTGKIKAGE 180
            F  GN  WPC  +I C  G LK    K++G  +  CD    +DS+TC+V+ S+L+A    P  CQLCL  VGG+PS+G  + EK+ +G   W N H  ++ C GAKT+DG+ +KNAT A+GD+VG+ C C +   +V +DI  GCTG+I+ G+
Sbjct:   21 FIAGNPLWPC-PSIVCVPGLLKAV-PKTNGGLFSPCDQKDSQDSTTCQVSCSILSARGSDPPICQLCLTSVGGTPSLGVLSGEKNSQGRDEWLNIHACWTICCGAKTSDGEKYKNATLATGDIVGRACKCSNPASDV-EDITHGCTGEIEEGD 170          
BLAST of mRNA_L-elsbetiae_contig10024.71.1 vs. uniprot
Match: A0A6H5JLP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP4_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 1.020e-35
Identity = 76/175 (43.43%), Postives = 103/175 (58.86%), Query Frame = 0
Query:    6 RSSPLKRKSAEKPTHGAKPTTLFEVGNHDWPCLDAINCPSGFLKLRNRKSDGKPYVTCDHNSWRDSSTCKVALSMLNASKDHPHPCQLCLQDVGGSPSIGNPTDEKDDRGYTIWENFHGVFSHCAGAKTADGKTFKNATPASGDVVGKGCLCWDGKKNVAKDINLGCTGKIKAGE 180
            R SPLK+   E+P+   +    F  GN  WPC    N   G LK +  K+ G  +  CD     D +TC+V+ S L+    +P  C+LCL  VGG+PS+G  + EK D+G   W N H V+  CAGA T+DG  +KNAT A+G++VG+ C C+D +KNV  DI  GCTG I+ GE
Sbjct:    3 RGSPLKKIRTEEPSSSKR---KFLAGNPLWPCPS--NYCDGLLK-KIPKTKGGFFTPCDQKQSNDPNTCQVSCSFLSERGPNPVKCELCLTPVGGTPSLGVLSGEKTDQGRGEWLNIHAVWKLCAGATTSDGGKYKNATLATGEIVGRPCSCFDPEKNV-DDIKEGCTGDIQEGE 170          
BLAST of mRNA_L-elsbetiae_contig10024.71.1 vs. uniprot
Match: D7G4Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z8_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 7.310e-29
Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = 0
Query:    1 MSALSRSSPLKRKSAEKPTHGAKPTTLFEVGNHDWPCLDAINCPSGFLKLRNRKSDGKPYVTCDHNSWRDSSTCKVALSMLNASKDHPHPCQLCLQDVGGSPSIGNPTDEKDDRGYT 117
            M+ LS++SPLKRK  +      KP  L  +G   WPC D  N   G LK+  +K+ G  ++TCD N W+D ++CKV+LS+L  S+DHPH C LCL+DVGG+PS+G  T E D RGY+
Sbjct:  624 MNTLSKASPLKRKQQQASAPIVKPRALLTLGVEGWPCPDD-NSTDGLLKVVKKKNGGD-FLTCDQNIWKDETSCKVSLSLLKPSQDHPHECSLCLKDVGGTPSLGTDTGETDSRGYS 738          
BLAST of mRNA_L-elsbetiae_contig10024.71.1 vs. uniprot
Match: A0A6H5KDP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDP4_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 3.760e-8
Identity = 45/156 (28.85%), Postives = 68/156 (43.59%), Query Frame = 0
Query:    8 SPLKRKSAEKPTHGAKPTTLFEVGNHDWPCLDAINCP-SGFLKLRNRKSDGKPYVTCDHNSWRDSSTCKVALSMLNASK-----DHPHPCQLCLQDVGGSPSIGNPTDEKDD-RGYTIWENFHGVFSHCAGAKTADGKTFKN----ATPASGDVVG 152
            SP K+   E+ + GA       VG         + CP    + L+     G+P++ C  N   D  +C  + ++    +          CQ+C      +PSIG PT EK+   G  ++EN H  F HC G +T D  + K+     T A+G VVG
Sbjct:    9 SPAKKAKPEQTSDGAGSGGFKTVGE----VYPGLVCPLDQKVLLKKYTKTGRPWIVCSGNVQNDPDSCHFSANLFGRDRVKEGDKSKIACQICDVPAEFTPSIGEPTGEKNPLTGKPVFENTHVFFPHCWGKQTEDPVSGKSLLVHCTAATGAVVG 160          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10024.71.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JXZ5_9PHAE8.480e-3644.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLP4_9PHAE1.020e-3543.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4Z8_ECTSI7.310e-2948.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDP4_9PHAE3.760e-828.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10024contigL-elsbetiae_contig10024:5764..7161 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10024.71.1mRNA_L-elsbetiae_contig10024.71.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10024 5764..7170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10024.71.1 ID=prot_L-elsbetiae_contig10024.71.1|Name=mRNA_L-elsbetiae_contig10024.71.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=180bp
MSALSRSSPLKRKSAEKPTHGAKPTTLFEVGNHDWPCLDAINCPSGFLKL
RNRKSDGKPYVTCDHNSWRDSSTCKVALSMLNASKDHPHPCQLCLQDVGG
SPSIGNPTDEKDDRGYTIWENFHGVFSHCAGAKTADGKTFKNATPASGDV
VGKGCLCWDGKKNVAKDINLGCTGKIKAGE
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