mRNA_L-elsbetiae_contig10764.708.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10764.708.1 vs. uniprot
Match: D7FSC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSC2_ECTSI) HSP 1 Score: 287 bits (734), Expect = 1.330e-89 Identity = 140/171 (81.87%), Postives = 150/171 (87.72%), Query Frame = 1 Query: 184 MAAGGPSLVEDE-ISAEEAIELISKAKAVVEGDMGVKVGAVKMLSPDFRFLWQFNGDMNRADYLTEGKGPYASLRAALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVFDGKEYPPSGARVEAAPECVSVVFDE-SGLVTKMTGGFCIDRGMGNTGRGGGIWGVLQ 690 MA GPS++E++ +SA+EAI LI KAK +VE DMGVKV ML PDFRFLWQFNGDM RADYLTEG GPYA+LR ALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVFDGKEYPPSG RVEAAPECVSV FDE SGL TK+TGGFCIDRG+GNTG GGIWGVLQ Sbjct: 1 MAGDGPSVLEEQPVSADEAIALIDKAKTIVEADMGVKVA--DMLGPDFRFLWQFNGDMARADYLTEGTGPYATLRTALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVFDGKEYPPSGIRVEAAPECVSVTFDEKSGLATKITGGFCIDRGVGNTGPAGGIWGVLQ 169
BLAST of mRNA_L-elsbetiae_contig10764.708.1 vs. uniprot
Match: A0A8J9WRP9_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WRP9_9CHLO) HSP 1 Score: 111 bits (278), Expect = 1.140e-26 Identity = 64/159 (40.25%), Postives = 92/159 (57.86%), Query Frame = 1 Query: 241 ELISKAKAVVEGDMGVKVGAVKMLSPDFRFLWQFNGDMNRA---------DYLTEGKGPYASLRAALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVFDGKEYPPSGARVEAAPECVSVVFDESGLVTKMTGGFCIDRGMGNTGRGGGIWGVLQ 690 ELI+ A+ V + + GV+ ++L+ DFRF + +A D++ G +L+ A P++ + YD+RVDKY NRVW T R T TH GPL F G Y P+G V APEC+S F+E G VT TGG+ +DR +GNT + G ++G+L Sbjct: 24 ELIALAQKVFKSNSGVE--QPELLADDFRFEFPVVSLAKKASCCLSSIICDFVKAVSG--FNLKQAFPNMESHPYDWRVDKYEPNRVWFTVRNTATHAGPLTFFGATYKPTGKVVLGAPECLSYTFNEEGKVTSFTGGYIMDRRVGNTNKLGAMFGILS 178
BLAST of mRNA_L-elsbetiae_contig10764.708.1 vs. uniprot
Match: A0A5J4YCA2_9CHLO (Amidase signature enzyme n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YCA2_9CHLO) HSP 1 Score: 107 bits (266), Expect = 3.040e-24 Identity = 62/149 (41.61%), Postives = 89/149 (59.73%), Query Frame = 1 Query: 241 ELISKAKAVVEGDMGVKVGAVKMLSPDFRFLWQFNGDMNRADYLTEGKGPYASLRAALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVFDGKEYPPSGARVEAAPECVSVVFDESGLVTKMTGGFCIDRGMGNTGRGGGIWGVL 687 +LIS AK + G K + LS DFRF + +++ +YL + G + +L A P+L + Y +RVD Y NRVW TTR+T TH GPL F GK + + +V APEC+S F+E G T TGG+ +DR +GNT + G ++G+L Sbjct: 101 KLISMAKQLFGSSSGQKDPSA--LSDDFRFEFPIVS-LSKEEYL-KATGTF-NLEEAFPNLASHPYHWRVDPYEPNRVWFTTRVTATHAGPLKFFGKSFKATNKKVLGAPECLSYTFNEQGKCTGFTGGYIMDRRVGNTKKMGALFGIL 244
BLAST of mRNA_L-elsbetiae_contig10764.708.1 vs. uniprot
Match: I0YKW7_COCSC (Amidase signature enzyme n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YKW7_COCSC) HSP 1 Score: 108 bits (270), Expect = 1.760e-23 Identity = 64/157 (40.76%), Postives = 89/157 (56.69%), Query Frame = 1 Query: 220 ISAEEAIELISKAKAVVEGDMGVKVGAVKMLSPDFRFLWQFNGDMNRADYLTEGKGPYASLRAALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVFDGKEYPPSGARVEAAPECVSVVFDESGLVTKMTGGFCIDRGMGNTGRGGGIWGVLQ 690 I AE+ I L K A G V +L+ +FRF + + + D++ G +L+ A P++ + YD+RVDKY NRVW T R T TH GPL F G Y P+G V APEC+S F+E G VT TGG+ +DR +GNT + G ++G+L Sbjct: 20 IPAEKLIALAQKVFATNSG-----VEDPDLLADNFRFEFPVVS-LAKKDFVKAVSG--FNLKDAFPNMESHPYDWRVDKYEPNRVWWTVRNTATHTGPLRFFGATYKPTGKVVLGAPECLSYTFNEEGKVTSFTGGYIMDRRVGNTNKLGAMFGILS 168
BLAST of mRNA_L-elsbetiae_contig10764.708.1 vs. uniprot
Match: A0A7S3RA71_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3RA71_DUNTE) HSP 1 Score: 102 bits (253), Expect = 7.230e-23 Identity = 58/137 (42.34%), Postives = 83/137 (60.58%), Query Frame = 1 Query: 277 DMGVKVGAVKMLSPDFRFLWQFNGDMNRADYLTEGKGPYASLRAALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVFDGKEYPPSGARVEAAPECVSVVFDESGLVTKMTGGFCIDRGMGNTGRGGGIWGVL 687 D GV + ML+P+FRF + + + YL + L+ A P++ ++YD+RVD Y +NRVW T R T TH GPL F Y P+G V+ APEC+S+VF+E G T TGG+ +DR +GNT G ++G+L Sbjct: 54 DKGVGMEDESMLAPEFRFEFPVVS-LPKDKYLEAVRS--FKLKEAFPNMNPHAYDFRVDPYEQNRVWFTVRNTCTHTGPLRFL-TTYKPTGKVVQGAPECMSLVFNEEGKCTSYTGGYVMDRRVGNTKGLGAMFGIL 186
BLAST of mRNA_L-elsbetiae_contig10764.708.1 vs. uniprot
Match: A0A6V2Z4R6_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6V2Z4R6_EMIHU) HSP 1 Score: 102 bits (254), Expect = 8.940e-23 Identity = 61/170 (35.88%), Postives = 89/170 (52.35%), Query Frame = 1 Query: 184 MAAGGPSLVEDEISAEEAIELISKAKAVVEGDMGVKVGAVKMLSPDFRFLWQFNGDMNRADYLTEGKGPYASLRAALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVFD-GKEYPPSGARVEAAPECVSVVFDESGLVTKMTGGFCIDRGMGNTGRGGGIWGVLQ 690 ++A GP+ E+ EL A+ V D + +MLS DF + G +N+ D+L G ++ PD+ + D+ D NR WA RL+GTH+G G +PPSGA ++ P+CVSV FDE GLVT+ TGG+ +DR G TG GG + + + Sbjct: 43 LSAAGPA------ELEKTAELKRLAREFVLNDGFHQPAKPEMLSDDFVWFGPIVGPLNKQDFL--GTVGLFAVWDGFPDMKMSLSDFTQDPTEPNRFWAILRLSGTHSGTQQSGTGMSFPPSGAALDVGPQCVSVTFDEEGLVTRYTGGYIVDRRQGTTGEFGGFFAITK 204
BLAST of mRNA_L-elsbetiae_contig10764.708.1 vs. uniprot
Match: A0A250XMF5_9CHLO (Uncharacterized protein n=2 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XMF5_9CHLO) HSP 1 Score: 100 bits (249), Expect = 3.100e-22 Identity = 62/165 (37.58%), Postives = 90/165 (54.55%), Query Frame = 1 Query: 193 GGPSLVEDEISAEEAIELISKAKAVVEGDMGVKVGAVKMLSPDFRFLWQFNGDMNRADYLTEGKGPYASLRAALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVFDGKEYPPSGARVEAAPECVSVVFDESGLVTKMTGGFCIDRGMGNTGRGGGIWGVL 687 G P IS EE IE KAK+V + G++ L+ DFRF + + + +YL L+ A PD+ ++YD+RVD + NRVW T+R+T TH G L F ++ P+ V APEC S F+ G VT TGG+ +DR +GNT G ++G++ Sbjct: 46 GTPKADSFPISKEELIE---KAKSVFKAGTGLE--RPDDLADDFRFEFPIIS-LPKKEYLAAVSS--FRLKEAFPDINPHAYDFRVDPFEPNRVWFTSRVTATHKGALKFGDMKFDPTNKLVFGAPECQSYTFNAEGKVTSFTGGYIMDRRVGNTKGLGAVFGII 202
BLAST of mRNA_L-elsbetiae_contig10764.708.1 vs. uniprot
Match: A0A250XML3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XML3_9CHLO) HSP 1 Score: 99.8 bits (247), Expect = 8.810e-22 Identity = 61/163 (37.42%), Postives = 87/163 (53.37%), Query Frame = 1 Query: 199 PSLVEDEISAEEAIELISKAKAVVEGDMGVKVGAVKMLSPDFRFLWQFNGDMNRADYLTEGKGPYASLRAALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVFDGKEYPPSGARVEAAPECVSVVFDESGLVTKMTGGFCIDRGMGNTGRGGGIWGVL 687 P E + ++ LI AK + E +GV+ + L+ DFRF + + + DY+ G L A PD+ + YD RVD Y NRVW T R T TH GPL F + P+ V APEC+S++F+ G T TGG+ +DR +GNT G ++GV+ Sbjct: 48 PGTPEQDAFPIKSERLIELAKKLFEEQVGVQDPSA--LADDFRFEFPIIS-LPKKDYIKAVSG--FKLLDAFPDMNPHPYDVRVDPYEPNRVWFTVRNTATHTGPLKFGPMSFKPTNKVVYGAPECLSLIFNAEGKCTCYTGGYVMDRRLGNTQGLGAMFGVI 205
BLAST of mRNA_L-elsbetiae_contig10764.708.1 vs. uniprot
Match: R1CVS6_EMIHU (Uncharacterized protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CVS6_EMIHU) HSP 1 Score: 100 bits (249), Expect = 2.870e-21 Identity = 66/171 (38.60%), Postives = 95/171 (55.56%), Query Frame = 1 Query: 175 LLRMAAGGP--SLVE-------DEISAEEAIELISKAKAVVEGDMGVKVGAVKMLSPDFRFLWQFNGDMNRADYLTE-GKGPYASLRAALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVFDGKEYPPSGARVEAAPECVSVVFDESGLVTKMTGGFCIDRGMGNT 657 LLR+A P SL+E D +S E +EL + A++E D G + ++L+ F F G + +A++L+ G+ ++LR A PDL ++ D RV ++ NRVW T +GTH+ L G YPP+G R EA PEC S FD G +TGG+ +DR MGNT Sbjct: 202 LLRLAPPPPEPSLLEVPRLATSDALSEERLLELCA---ALLETDYGAE--RPELLADSFTFTGPVVGPLRKAEFLSSYGE---SNLREAFPDLEYSYRDVRVCPFDVNRVWYTYSRSGTHSATLRLLGSSYPPTGKRWEAPPECGSAQFDTEGRCVALTGGYVMDRRMGNT 364
BLAST of mRNA_L-elsbetiae_contig10764.708.1 vs. uniprot
Match: C1MTU9_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MTU9_MICPC) HSP 1 Score: 91.3 bits (225), Expect = 2.110e-18 Identity = 59/183 (32.24%), Postives = 91/183 (49.73%), Query Frame = 1 Query: 178 LRMAAGGPSLVEDEISAEEAI------------ELISKAKAVVEGDMGVKVGAVKMLSPDFRFLWQFNGDMNRADYLTEGKGPYASLRAALPDLFWNSYDYRVDKYNRNRVWATTRLTGTHNGPLVFDGKEYPPSGARVEAAPECVSVVFDESGLVTKMTGGFCIDRGMGNTGRGGGIWGVLQ 690 L + A PS + D + +E + EL++K K+ + +G L+ DF F+ G + R D G + L PD+ N + +RVD + NRVW R TGTH G L + +G +VE P+ +S+ F+ESG +TK+T G +DR +GNTG GG++G+ Sbjct: 69 LDLDAPNPSAIYDVVDEDEMLYGASNTFPIKPDELVAKCKSALRAGFA-NIG--DELAEDFEFIGPVVGPLPR-DAFVNAVGGF-DLTTGFPDMKSNYHHFRVDPFETNRVWFQNRTTGTHAGKLAG---RFEATGTKVECPPQALSMTFNESGKITKITVGVVMDRTIGNTGGLGGVFGLFN 243 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10764.708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10764.708.1 >prot_L-elsbetiae_contig10764.708.1 ID=prot_L-elsbetiae_contig10764.708.1|Name=mRNA_L-elsbetiae_contig10764.708.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=230bp MAFRGVLLALLPAACLGFAPALRSGVPGCDTSASLSHRASSSPVGGLARSback to top mRNA from alignment at L-elsbetiae_contig10764:1648..6481+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10764.708.1 ID=mRNA_L-elsbetiae_contig10764.708.1|Name=mRNA_L-elsbetiae_contig10764.708.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4834bp|location=Sequence derived from alignment at L-elsbetiae_contig10764:1648..6481+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10764:1648..6481+ >mRNA_L-elsbetiae_contig10764.708.1 ID=mRNA_L-elsbetiae_contig10764.708.1|Name=mRNA_L-elsbetiae_contig10764.708.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1380bp|location=Sequence derived from alignment at L-elsbetiae_contig10764:1648..6481+ (Laminarionema elsbetiae ELsaHSoW15)back to top |