prot_L-elsbetiae_contig10734.684.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10734.684.1
Unique Nameprot_L-elsbetiae_contig10734.684.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length221
Homology
BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: A0A6H5KGW7_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW7_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 7.080e-96
Identity = 148/196 (75.51%), Postives = 165/196 (84.18%), Query Frame = 0
Query:    1 MMMGEDEEQYTEEPQIPSSLNLPLLSRDDATWKEF-GADIMADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWAKEMASKRAQHRRLAAEHRVDIVN-------MSANPLLPGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKE 188
            MMM E EE+ T +P+  ++L LPLLSRD+ TW++F GA+I+AD A RGEW DDN+R LLWRLLLGV+P  SPPSEWA EMA+KR ++RRL AEHRVDI         MSANPL  GSGSGDDPWSHFY+RKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLS+WADLNT TAYRQGMHEVLAPLIL LEKE
Sbjct:    1 MMMNESEERSTSDPKDRATLALPLLSRDNNTWEQFQGANIVADTAHRGEWNDDNSRGLLWRLLLGVVPRDSPPSEWATEMANKRGEYRRLKAEHRVDISKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSVWADLNTGTAYRQGMHEVLAPLILVLEKE 196          
BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: D7FWI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI0_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 1.580e-69
Identity = 109/140 (77.86%), Postives = 116/140 (82.86%), Query Frame = 0
Query:   40 MADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWAKEMASKRAQHRRLAAEHRVDIVN-------MSANPLLPGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQ 172
            M    + GEW DDN+R LLWRLLLGVIP  SPPSEWA EMA+KR ++RRL AEHRVDI         MSANPL  GSGSGDDPWSHFY+RKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLS+WADLNT TAYRQ
Sbjct:    1 MPAVCMSGEWNDDNSRGLLWRLLLGVIPRDSPPSEWATEMANKRGEYRRLKAEHRVDISKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSVWADLNTETAYRQ 140          
BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: A0A7S0YK08_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YK08_9CRYP)

HSP 1 Score: 97.1 bits (240), Expect = 3.450e-21
Identity = 57/152 (37.50%), Postives = 86/152 (56.58%), Query Frame = 0
Query:   44 ALRGEWKDDNTRALLWRLLLGVIPGG--SPPSEWAKEMASKRAQHRRLAAEHRVDIVNMS--ANPLL--PGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 189
            A+ G  ++   R+L WRL LGV+P G  S P+ W   +  +RA +     E  VD    S  A+PL+  P + + D  W+ +++ +++   I+ DLERL P    D F     Q  +L  L++WA LN AT+YRQGMHEVLA ++  L ++A
Sbjct:   17 AMTGGLRNSTIRSLAWRLFLGVLPAGECSLPA-WVAAVEEQRASYDARCEEFLVDPYKQSDGADPLVNNPLAQTEDSAWTKYFELRQLQKDIQIDLERLNPDD--DFFRGAGVQGAMLRALTVWACLNPATSYRQGMHEVLAHIVKVLHEDA 165          
BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: A0A2R5GTG8_9STRA (TBC1 domain family member 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GTG8_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.200e-19
Identity = 63/196 (32.14%), Postives = 95/196 (48.47%), Query Frame = 0
Query:   22 LPLLSRDDA-TWKEFGADIMAD--AALRGEWKDDNTRALLWRLLLGVIPGGSPP----SEWAKEMASKRAQHRRLAAEHRVDIVNMSAN----PL----------------LPGSGSG-DDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 189
            L +   DDA  W+    D++A   A+L+G       R+L WR   G +P  + P    + W    A  R ++  L     VD    + +    PL                  G+ +G  +PW  F++ KE+ + I+ DLERL+PTGC D F+ P   ++L  VL  W+ L+  T+YRQGMHE+ APL+  L  +A
Sbjct:   13 LKVAKGDDACAWEALADDMVAGNLASLQGL----GARSLAWRAACGTLPVAASPRAIAATWPNVAADLRREYEALRESLVVDPDEAADDGDFDPLGGXXXXXXXXXXXXHGSSGAKTGVSNPWEEFHKDKELLEEIRQDLERLYPTGCDDFFMEPTVSKVLQGVLFTWSKLHPDTSYRQGMHELAAPLLYCLHADA 204          
BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: A0A7S0LIA7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LIA7_9EUKA)

HSP 1 Score: 94.0 bits (232), Expect = 7.860e-19
Identity = 60/162 (37.04%), Postives = 87/162 (53.70%), Query Frame = 0
Query:   39 IMADAALRGEWKDDNTRALLWRLLLGVIPGGSP---PSEWAKEMASKRAQHRRLAAEHRVD------IVNMS-ANPLLPGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPAR-QELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 189
            ++  AA+ G  +D   R L WR LL  +P G P    S    +  + R ++  L  +H +D       +++S ANPL   + S   PWS F++ +E+ + IK DL RL P   G  F + AR QE +  +L +W  L+   +YRQGMHE+LAPL   LE EA
Sbjct:   20 LLFRAAMDGSLRDCPVRGLAWRYLLATLPAGVPLKRVSTLVDQTIAARREYMALREKHCIDPRTSGESLDISLANPLSQDANS---PWSEFFEFEELREEIKRDLMRLHP---GHDFFSGARVQETMERILFVWCKLHPNLSYRQGMHELLAPLYHVLETEA 175          
BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: UPI00106D8B13 (TBC1 domain family member 5-like isoform X1 n=3 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D8B13)

HSP 1 Score: 94.7 bits (234), Expect = 8.330e-19
Identity = 55/184 (29.89%), Postives = 97/184 (52.72%), Query Frame = 0
Query:   19 SLNLPLLSRD--DATWKE-FGADI----MADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWAKEMASKRAQHRRLAAEHRVDIVNMSANP-----LLPGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPAR-QELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 189
            ++ +P ++++  ++ W++ FG +     + + AL G  +D   R + WRL LG +        W++ +   R ++  L +   +D  +   +        P S   D PWS +++ K++TD I  DL RLFP   G H+    + +++LL +L  +A +N    Y+QGMHEVLAPL+  LE E+
Sbjct:   54 NIYIPAVTKESLESEWQQMFGTENYKKDLQNLALTGRLRDRRFRGVCWRLFLGCL--SDDVGHWSETVCESRTRYENLKSMFFIDPYSSKVDEDNVQVFDPLSQEIDSPWSQYFEDKKLTDLIYQDLNRLFP---GMHYFQSKKIKDVLLHILFCYAKMNPNVGYKQGMHEVLAPLLFVLENES 232          
BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: A0A0E9NEK8_SAICN (Rab-GAP TBC domain-containing protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NEK8_SAICN)

HSP 1 Score: 93.6 bits (231), Expect = 2.050e-18
Identity = 51/135 (37.78%), Postives = 77/135 (57.04%), Query Frame = 0
Query:   55 RALLWRLLLGVIPGGSPPSEWAKEMASKRAQHRRLAAEHRVDIVNMSANPLLPGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 189
            R+L W+L L V+P   P S W+  ++ +RA++  L A +    V  S +PL     S   PW   Y  +E+ +TI  D +R FP      F  P  Q++LL VL  ++ LN  T+YRQGMHE+LAP++ A++ +A
Sbjct:  141 RSLRWKLFLRVLPSYHP-SSWSDAISRERARYAELKARYTAPGVVESGDPLSQDESS---PWKERYADEELKETIIQDTQRTFPDI--PFFRLPRTQQILLDVLFTYSKLNPDTSYRQGMHELLAPILFAVQGDA 269          
BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: A0A6A5BG68_NAEFO (Rab-GAP TBC domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BG68_NAEFO)

HSP 1 Score: 91.7 bits (226), Expect = 7.850e-18
Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 0
Query:   44 ALRGEWKDDNTRALLWRLLLGVIP--GGSPPSEWAKEMASKRAQHRRLAAEHRVDIVNMSANPLL-------------PGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 189
            AL G       R+++WR+ LGV+P         W  ++ S R+++  L  +H  D   M+ N                P S S  +PWS F++  E+  TI  DL+RL+P      F     Q LL  +L +W+  NT  +YRQGMHE+L+P++L + ++A
Sbjct:   45 ALSGNLGQSTIRSIIWRVFLGVLPLTDRFGKEHWIAKINSDRSRYEELLKKHENDPRKMAKNSATFSSEEEVDVTFCDPLSQSQSNPWSEFFENSELEKTIVQDLKRLYPEY--PFFRTEEIQNLLKRMLFVWSKENTDLSYRQGMHELLSPILLVVYRDA 203          
BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: V7C9B4_PHAVU (Rab-GAP TBC domain-containing protein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=V7C9B4_PHAVU)

HSP 1 Score: 91.3 bits (225), Expect = 1.330e-17
Identity = 60/178 (33.71%), Postives = 89/178 (50.00%), Query Frame = 0
Query:   16 IPSSLNLPLLSRDDATWKEFGADIMADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWAKEMASKRAQHRRLAAEHRVD--IVNMSAN-PLL----PGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALE 186
            +P +L  P L    +    F +DI+      G  +  + R L WR+ LGV+P  S   +  +  A+ R ++  L   H VD  IV   +N P L    P S + D  WS F++  E+   I  DL RL+P   G++F  P  Q +L  +L LW   +    YRQGMHE+LAP++  L+
Sbjct:    1 MPPALMDPPLPESSSVLS-FSSDIVFPGTEPGNRRFGDLRGLQWRINLGVLPSSSI-DDLRRATANSRRRYASLRGRHLVDPHIVKDESNAPNLVMDNPLSQNPDSTWSRFFRNAEIERMIDQDLSRLYPEH-GNYFQTPGCQGILRRILLLWCHKHPECGYRQGMHELLAPVLYVLQ 175          
BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: A0A7S4MSZ1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MSZ1_9EUKA)

HSP 1 Score: 90.1 bits (222), Expect = 1.760e-17
Identity = 52/158 (32.91%), Postives = 80/158 (50.63%), Query Frame = 0
Query:   36 GADIMADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWAKEMASKRAQHRRLAAEHRVD-IVNMSANPLL---PGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 189
            G     + AL G  +    R+L WRL L +IP GS    W   +  +R ++  L  E+ ++      ++ LL   P S   D PW  F+Q KE+ + I  D+ R +P    + F       ++L++L + A  N  T YRQGM+E+LAP+I  L KE+
Sbjct:   21 GIQFAKNQALAGTLQHSALRSLCWRLFLNIIPEGSDTLAWGDLIGQQRREYEALKEEYLINPYEEPESDDLLVNNPLSQVEDSPWQTFFQNKELQNEILQDIVRTYPEK--EFFQDDKVHNMMLNILFIVAKRNPNTGYRQGMNELLAPIIYLLHKES 176          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGW7_9PHAE7.080e-9675.51Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
D7FWI0_ECTSI1.580e-6977.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0YK08_9CRYP3.450e-2137.50Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A2R5GTG8_9STRA1.200e-1932.14TBC1 domain family member 5 n=1 Tax=Hondaea fermen... [more]
A0A7S0LIA7_9EUKA7.860e-1937.04Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
UPI00106D8B138.330e-1929.89TBC1 domain family member 5-like isoform X1 n=3 Ta... [more]
A0A0E9NEK8_SAICN2.050e-1837.78Rab-GAP TBC domain-containing protein n=2 Tax=Sait... [more]
A0A6A5BG68_NAEFO7.850e-1832.30Rab-GAP TBC domain-containing protein n=1 Tax=Naeg... [more]
V7C9B4_PHAVU1.330e-1733.71Rab-GAP TBC domain-containing protein n=1 Tax=Phas... [more]
A0A7S4MSZ1_9EUKA1.760e-1732.91Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 120..189
e-value: 4.8E-9
score: 36.2
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 49..221
score: 10.745
NoneNo IPR availableGENE3D1.10.8.270coord: 77..193
e-value: 4.4E-7
score: 31.9
NoneNo IPR availablePANTHERPTHR22957:SF448coord: 111..188
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 111..188
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 51..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10734contigL-elsbetiae_contig10734:2668..5699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10734.684.1mRNA_L-elsbetiae_contig10734.684.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10734 2668..5709 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10734.684.1 ID=prot_L-elsbetiae_contig10734.684.1|Name=mRNA_L-elsbetiae_contig10734.684.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=221bp
MMMGEDEEQYTEEPQIPSSLNLPLLSRDDATWKEFGADIMADAALRGEWK
DDNTRALLWRLLLGVIPGGSPPSEWAKEMASKRAQHRRLAAEHRVDIVNM
SANPLLPGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPAR
QELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEAAAASRSDTTGG
RSAAAAAAAAPAAAAAAAKAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf