mRNA_L-elsbetiae_contig10734.684.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10734.684.1
Unique NamemRNA_L-elsbetiae_contig10734.684.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: A0A6H5KGW7_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW7_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 5.650e-96
Identity = 148/196 (75.51%), Postives = 165/196 (84.18%), Query Frame = 2 
Query:   11 MMMGEDEEQYTEEPQIPSSLNLPLLSRDDATWKEF-GADIMADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWAKEMASKRAQHRRLAAEHRVDIVN-------MSANPLLPGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKE 574
            MMM E EE+ T +P+  ++L LPLLSRD+ TW++F GA+I+AD A RGEW DDN+R LLWRLLLGV+P  SPPSEWA EMA+KR ++RRL AEHRVDI         MSANPL  GSGSGDDPWSHFY+RKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLS+WADLNT TAYRQGMHEVLAPLIL LEKE
Sbjct:    1 MMMNESEERSTSDPKDRATLALPLLSRDNNTWEQFQGANIVADTAHRGEWNDDNSRGLLWRLLLGVVPRDSPPSEWATEMANKRGEYRRLKAEHRVDISKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSVWADLNTGTAYRQGMHEVLAPLILVLEKE 196
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BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: D7FWI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI0_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 1.760e-69
Identity = 109/140 (77.86%), Postives = 116/140 (82.86%), Query Frame = 2 
Query:  128 MADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWAKEMASKRAQHRRLAAEHRVDIVN-------MSANPLLPGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQ 526
            M    + GEW DDN+R LLWRLLLGVIP  SPPSEWA EMA+KR ++RRL AEHRVDI         MSANPL  GSGSGDDPWSHFY+RKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLS+WADLNT TAYRQ
Sbjct:    1 MPAVCMSGEWNDDNSRGLLWRLLLGVIPRDSPPSEWATEMANKRGEYRRLKAEHRVDISKVLDTTDPMSANPLFSGSGSGDDPWSHFYERKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSVWADLNTETAYRQ 140
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BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: A0A7S0YK08_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YK08_9CRYP)

HSP 1 Score: 97.1 bits (240), Expect = 3.730e-21
Identity = 57/152 (37.50%), Postives = 86/152 (56.58%), Query Frame = 2 
Query:  140 ALRGEWKDDNTRALLWRLLLGVIPGG--SPPSEWAKEMASKRAQHRRLAAEHRVDIVNMS--ANPLL--PGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 577
            A+ G  ++   R+L WRL LGV+P G  S P+ W   +  +RA +     E  VD    S  A+PL+  P + + D  W+ +++ +++   I+ DLERL P    D F     Q  +L  L++WA LN AT+YRQGMHEVLA ++  L ++A
Sbjct:   17 AMTGGLRNSTIRSLAWRLFLGVLPAGECSLPA-WVAAVEEQRASYDARCEEFLVDPYKQSDGADPLVNNPLAQTEDSAWTKYFELRQLQKDIQIDLERLNPDD--DFFRGAGVQGAMLRALTVWACLNPATSYRQGMHEVLAHIVKVLHEDA 165
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BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: A0A2R5GTG8_9STRA (TBC1 domain family member 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GTG8_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.300e-19
Identity = 63/196 (32.14%), Postives = 95/196 (48.47%), Query Frame = 2 
Query:   74 LPLLSRDDA-TWKEFGADIMAD--AALRGEWKDDNTRALLWRLLLGVIPGGSPP----SEWAKEMASKRAQHRRLAAEHRVDIVNMSAN----PL----------------LPGSGSG-DDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 577
            L +   DDA  W+    D++A   A+L+G       R+L WR   G +P  + P    + W    A  R ++  L     VD    + +    PL                  G+ +G  +PW  F++ KE+ + I+ DLERL+PTGC D F+ P   ++L  VL  W+ L+  T+YRQGMHE+ APL+  L  +A
Sbjct:   13 LKVAKGDDACAWEALADDMVAGNLASLQGL----GARSLAWRAACGTLPVAASPRAIAATWPNVAADLRREYEALRESLVVDPDEAADDGDFDPLGGXXXXXXXXXXXXHGSSGAKTGVSNPWEEFHKDKELLEEIRQDLERLYPTGCDDFFMEPTVSKVLQGVLFTWSKLHPDTSYRQGMHELAAPLLYCLHADA 204
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BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: A0A7S0LIA7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LIA7_9EUKA)

HSP 1 Score: 94.0 bits (232), Expect = 8.500e-19
Identity = 60/162 (37.04%), Postives = 87/162 (53.70%), Query Frame = 2 
Query:  125 IMADAALRGEWKDDNTRALLWRLLLGVIPGGSP---PSEWAKEMASKRAQHRRLAAEHRVD------IVNMS-ANPLLPGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPAR-QELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 577
            ++  AA+ G  +D   R L WR LL  +P G P    S    +  + R ++  L  +H +D       +++S ANPL   + S   PWS F++ +E+ + IK DL RL P   G  F + AR QE +  +L +W  L+   +YRQGMHE+LAPL   LE EA
Sbjct:   20 LLFRAAMDGSLRDCPVRGLAWRYLLATLPAGVPLKRVSTLVDQTIAARREYMALREKHCIDPRTSGESLDISLANPLSQDANS---PWSEFFEFEELREEIKRDLMRLHP---GHDFFSGARVQETMERILFVWCKLHPNLSYRQGMHELLAPLYHVLETEA 175
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BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: UPI00106D8B13 (TBC1 domain family member 5-like isoform X1 n=3 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D8B13)

HSP 1 Score: 94.7 bits (234), Expect = 9.030e-19
Identity = 55/184 (29.89%), Postives = 97/184 (52.72%), Query Frame = 2 
Query:   65 SLNLPLLSRD--DATWKE-FGADI----MADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWAKEMASKRAQHRRLAAEHRVDIVNMSANP-----LLPGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPAR-QELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 577
            ++ +P ++++  ++ W++ FG +     + + AL G  +D   R + WRL LG +        W++ +   R ++  L +   +D  +   +        P S   D PWS +++ K++TD I  DL RLFP   G H+    + +++LL +L  +A +N    Y+QGMHEVLAPL+  LE E+
Sbjct:   54 NIYIPAVTKESLESEWQQMFGTENYKKDLQNLALTGRLRDRRFRGVCWRLFLGCL--SDDVGHWSETVCESRTRYENLKSMFFIDPYSSKVDEDNVQVFDPLSQEIDSPWSQYFEDKKLTDLIYQDLNRLFP---GMHYFQSKKIKDVLLHILFCYAKMNPNVGYKQGMHEVLAPLLFVLENES 232
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BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: A0A0E9NEK8_SAICN (Rab-GAP TBC domain-containing protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NEK8_SAICN)

HSP 1 Score: 93.6 bits (231), Expect = 2.220e-18
Identity = 51/135 (37.78%), Postives = 77/135 (57.04%), Query Frame = 2 
Query:  173 RALLWRLLLGVIPGGSPPSEWAKEMASKRAQHRRLAAEHRVDIVNMSANPLLPGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 577
            R+L W+L L V+P   P S W+  ++ +RA++  L A +    V  S +PL     S   PW   Y  +E+ +TI  D +R FP      F  P  Q++LL VL  ++ LN  T+YRQGMHE+LAP++ A++ +A
Sbjct:  141 RSLRWKLFLRVLPSYHP-SSWSDAISRERARYAELKARYTAPGVVESGDPLSQDESS---PWKERYADEELKETIIQDTQRTFPDI--PFFRLPRTQQILLDVLFTYSKLNPDTSYRQGMHELLAPILFAVQGDA 269
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BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: A0A6A5BG68_NAEFO (Rab-GAP TBC domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BG68_NAEFO)

HSP 1 Score: 91.7 bits (226), Expect = 8.480e-18
Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 2 
Query:  140 ALRGEWKDDNTRALLWRLLLGVIP--GGSPPSEWAKEMASKRAQHRRLAAEHRVDIVNMSANPLL-------------PGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 577
            AL G       R+++WR+ LGV+P         W  ++ S R+++  L  +H  D   M+ N                P S S  +PWS F++  E+  TI  DL+RL+P      F     Q LL  +L +W+  NT  +YRQGMHE+L+P++L + ++A
Sbjct:   45 ALSGNLGQSTIRSIIWRVFLGVLPLTDRFGKEHWIAKINSDRSRYEELLKKHENDPRKMAKNSATFSSEEEVDVTFCDPLSQSQSNPWSEFFENSELEKTIVQDLKRLYPEY--PFFRTEEIQNLLKRMLFVWSKENTDLSYRQGMHELLSPILLVVYRDA 203
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BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: V7C9B4_PHAVU (Rab-GAP TBC domain-containing protein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=V7C9B4_PHAVU)

HSP 1 Score: 91.3 bits (225), Expect = 1.440e-17
Identity = 60/178 (33.71%), Postives = 89/178 (50.00%), Query Frame = 2 
Query:   56 IPSSLNLPLLSRDDATWKEFGADIMADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWAKEMASKRAQHRRLAAEHRVD--IVNMSAN-PLL----PGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALE 568
            +P +L  P L    +    F +DI+      G  +  + R L WR+ LGV+P  S   +  +  A+ R ++  L   H VD  IV   +N P L    P S + D  WS F++  E+   I  DL RL+P   G++F  P  Q +L  +L LW   +    YRQGMHE+LAP++  L+
Sbjct:    1 MPPALMDPPLPESSSVLS-FSSDIVFPGTEPGNRRFGDLRGLQWRINLGVLPSSSI-DDLRRATANSRRRYASLRGRHLVDPHIVKDESNAPNLVMDNPLSQNPDSTWSRFFRNAEIERMIDQDLSRLYPEH-GNYFQTPGCQGILRRILLLWCHKHPECGYRQGMHELLAPVLYVLQ 175
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BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Match: A0A7S4MSZ1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MSZ1_9EUKA)

HSP 1 Score: 90.1 bits (222), Expect = 1.900e-17
Identity = 52/158 (32.91%), Postives = 80/158 (50.63%), Query Frame = 2 
Query:  116 GADIMADAALRGEWKDDNTRALLWRLLLGVIPGGSPPSEWAKEMASKRAQHRRLAAEHRVD-IVNMSANPLL---PGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEA 577
            G     + AL G  +    R+L WRL L +IP GS    W   +  +R ++  L  E+ ++      ++ LL   P S   D PW  F+Q KE+ + I  D+ R +P    + F       ++L++L + A  N  T YRQGM+E+LAP+I  L KE+
Sbjct:   21 GIQFAKNQALAGTLQHSALRSLCWRLFLNIIPEGSDTLAWGDLIGQQRREYEALKEEYLINPYEEPESDDLLVNNPLSQVEDSPWQTFFQNKELQNEILQDIVRTYPEK--EFFQDDKVHNMMLNILFIVAKRNPNTGYRQGMNELLAPIIYLLHKES 176
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10734.684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGW7_9PHAE5.650e-9675.51Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
D7FWI0_ECTSI1.760e-6977.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0YK08_9CRYP3.730e-2137.50Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A2R5GTG8_9STRA1.300e-1932.14TBC1 domain family member 5 n=1 Tax=Hondaea fermen... [more]
A0A7S0LIA7_9EUKA8.500e-1937.04Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
UPI00106D8B139.030e-1929.89TBC1 domain family member 5-like isoform X1 n=3 Ta... [more]
A0A0E9NEK8_SAICN2.220e-1837.78Rab-GAP TBC domain-containing protein n=2 Tax=Sait... [more]
A0A6A5BG68_NAEFO8.480e-1832.30Rab-GAP TBC domain-containing protein n=1 Tax=Naeg... [more]
V7C9B4_PHAVU1.440e-1733.71Rab-GAP TBC domain-containing protein n=1 Tax=Phas... [more]
A0A7S4MSZ1_9EUKA1.900e-1732.91Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10734contigL-elsbetiae_contig10734:2668..5709 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score229.2
Seed ortholog evalue1.9e-57
Seed eggNOG ortholog2880.D7FWI0
Preferred nameTBC1D5
KEGG rclassRC00002,RC00078
KEGG koko:K01765,ko:K03843,ko:K18081,ko:K18469
KEGG ReactionR03428,R03429,R05973,R06238
KEGG Pathwayko00510,ko00513,ko00562,ko01100,ko04070,map00510,map00513,map00562,map01100,map04070
KEGG ModuleM00055,M00132
Hectar predicted targeting categoryother localisation
GOsGO:0002090,GO:0002092,GO:0003674,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005773,GO:0005776,GO:0005794,GO:0005802,GO:0005829,GO:0006810,GO:0006886,GO:0006914,GO:0006950,GO:0007154,GO:0007165,GO:0007186,GO:0007187,GO:0007188,GO:0007193,GO:0008047,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009410,GO:0009605,GO:0009893,GO:0009987,GO:0009991,GO:0010008,GO:0010033,GO:0010243,GO:0010604,GO:0012505,GO:0014070,GO:0014074,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0016197,GO:0016236,GO:0016482,GO:0017016,GO:0017137,GO:0019222,GO:0019899,GO:0023052,GO:0030100,GO:0030234,GO:0030695,GO:0030904,GO:0031000,GO:0031090,GO:0031156,GO:0031267,GO:0031323,GO:0031325,GO:0031338,GO:0031410,GO:0031667,GO:0031982,GO:0031984,GO:0032879,GO:0032991,GO:0033036,GO:0033043,GO:0034613,GO:0035612,GO:0036270,GO:0042147,GO:0042221,GO:0042493,GO:0042594,GO:0042886,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043279,GO:0043547,GO:0043900,GO:0044093,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045184,GO:0045807,GO:0046907,GO:0048259,GO:0048260,GO:0048518,GO:0048519,GO:0048522,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0060589,GO:0060627,GO:0061919,GO:0065007,GO:0065009,GO:0070727,GO:0071702,GO:0071705,GO:0090630,GO:0097708,GO:0098588,GO:0098772,GO:0098791,GO:0098796,GO:0098805,GO:1901698,GO:1903664,GO:1903665,GO:1905394
EggNOG free text desc.regulation of vesicle fusion
EggNOG OGsCOG5210@1,KOG1091@2759
Ec32 ortholog descriptionRab-GTPase-TBC domain
Ec32 orthologEc-26_006540.1
EC2.4.1.132,2.4.1.257,2.7.1.159,3.1.3.64,3.1.3.95
COG Functional cat.H
CAZyGT4
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko01009,ko04131
Exons4
Model size673
Cds size663
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10734.684.1prot_L-elsbetiae_contig10734.684.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10734 2668..5699 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815291.3842752-CDS-L-elsbetiae_contig10734:2667..28141622815291.3842752-CDS-L-elsbetiae_contig10734:2667..2814Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10734 2668..2814 -
1691682820.832522-CDS-L-elsbetiae_contig10734:2667..28141691682820.832522-CDS-L-elsbetiae_contig10734:2667..2814Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10734 2668..2814 -
1622815291.3933907-CDS-L-elsbetiae_contig10734:3138..32911622815291.3933907-CDS-L-elsbetiae_contig10734:3138..3291Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10734 3139..3291 -
1691682820.8510518-CDS-L-elsbetiae_contig10734:3138..32911691682820.8510518-CDS-L-elsbetiae_contig10734:3138..3291Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10734 3139..3291 -
1622815291.4095836-CDS-L-elsbetiae_contig10734:4993..52171622815291.4095836-CDS-L-elsbetiae_contig10734:4993..5217Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10734 4994..5217 -
1691682820.8628325-CDS-L-elsbetiae_contig10734:4993..52171691682820.8628325-CDS-L-elsbetiae_contig10734:4993..5217Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10734 4994..5217 -
1622815291.4203694-CDS-L-elsbetiae_contig10734:5560..56991622815291.4203694-CDS-L-elsbetiae_contig10734:5560..5699Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10734 5561..5699 -
1691682820.874645-CDS-L-elsbetiae_contig10734:5560..56991691682820.874645-CDS-L-elsbetiae_contig10734:5560..5699Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10734 5561..5699 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815291.4307253-UTR-L-elsbetiae_contig10734:5699..57091622815291.4307253-UTR-L-elsbetiae_contig10734:5699..5709Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10734 5700..5709 -
1691682820.8897593-UTR-L-elsbetiae_contig10734:5699..57091691682820.8897593-UTR-L-elsbetiae_contig10734:5699..5709Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10734 5700..5709 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10734.684.1

>prot_L-elsbetiae_contig10734.684.1 ID=prot_L-elsbetiae_contig10734.684.1|Name=mRNA_L-elsbetiae_contig10734.684.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=221bp
MMMGEDEEQYTEEPQIPSSLNLPLLSRDDATWKEFGADIMADAALRGEWK
DDNTRALLWRLLLGVIPGGSPPSEWAKEMASKRAQHRRLAAEHRVDIVNM
SANPLLPGSGSGDDPWSHFYQRKEMTDTIKADLERLFPTGCGDHFLAPAR
QELLLSVLSLWADLNTATAYRQGMHEVLAPLILALEKEAAAASRSDTTGG
RSAAAAAAAAPAAAAAAAKAT
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mRNA from alignment at L-elsbetiae_contig10734:2668..5709-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10734.684.1 ID=mRNA_L-elsbetiae_contig10734.684.1|Name=mRNA_L-elsbetiae_contig10734.684.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3042bp|location=Sequence derived from alignment at L-elsbetiae_contig10734:2668..5709- (Laminarionema elsbetiae ELsaHSoW15)
GTGGGCTGCCATGATGATGGGCGAAGATGAAGAACAATATACGGAAGAGC
CCCAGATTCCTTCCTCGCTCAATTTGCCACTTTTGAGCCGCGACGATGCC
ACTTGGAAGGAGTTTGGTGCGGACATAATGGCCGATGCTGCTCTCCGAGG
TAAGTCTTTGTAGTGGAACAGTACATCGCCCGTTCTTTCCGATCCATCCT
ACCTATGTAGGGAAGACGAACAATGTTGCGCGTTTATGGATACAGCTCCA
CTGCAACATGATTTGTAAGGAGGCCGCTGTGCAGGCACTCCATCTTCGTG
GAAAGGTGGTATGTATCTGTCTAAATCCTCCACAGCTCGCCTGTGCCAAC
ATCATGGGTACAAAGCGTGCCATGCGCCCTAGTATGGCATGTGTGCCTCT
CTCACAACCAGCTTGGCCACGTGGCTTCACCATCATCCGTTTCCCGCTCT
GGCTTGACGCCTCGCCTCTCGTCATTCCGCCCCCCCCTCCAGGCGAGTGG
AAAGACGACAACACTCGAGCCCTGCTGTGGAGACTGCTGCTAGGCGTGAT
ACCGGGAGGTTCGCCCCCGTCGGAGTGGGCGAAGGAGATGGCCAGCAAGC
GGGCGCAGCACCGCCGTCTCGCCGCGGAGCACAGGGTCGACATCGTCAAC
ATGTCGGCAAATCCGCTGCTTCCAGGGTCGGGGTCGGGCGACGATCCCTG
GAGTCATTTTTACCAGGTTGGACTGCACAATAGACTATAAAAGTAGCTAC
ATATTTAGCAGGGATGTACATTACGCATTACGGGTATTTACGGGTAATGT
GGTTGGGCCGTGCGTAATGTGGACATTCCGCGGTAATGTTCCGTATTTCT
ACGGTGCCTCCACGCCCCCCCCTATACCCCCCTTGTCCAATGCCCCCCCC
CCCAAGAATTCAAAATACAGCACCGCAGCACACAGCAGCACACAGCAGCA
GCACACAGCAGCAGCACACCACAACAGCAGACCACAACATGAGCCTGCAG
ACCCTTAGCAACGAGCCCGATGGTCTCGAGGGTCGGCAAGCCCTCCTTTC
GCTACATGTGTTGCAAGACTCCGGGAGTTGCGTCTCTTGTCTCTTGTGCT
ACGATACTCGGTTTAAAAGTTTGAAGTTTGAAGCAGCTGGTTTGAGGTTT
GATCGCAAAGAGGAAGGACATGGAGAATGGAGAATGAGCATAATCGTTTT
TCTTTTTGGCTTTATATGAAGTCTGTACTCTCTGTACTCTGCGCGCTCTG
CGCTCTGTACCATACAACATGCCAACAACGGTAGCTGCAGGGCTGCAGCT
GTGGTGGTAGGGTATCATACATCAAACGTCAAGCATACAAACATACAACC
ACATTCTCGTCGAGAACGCGAAGCAAGAGAGCAAAGCTAAGTACGGAACC
CCTGGGTACAGGGTAATACAGCTAGACACGGAACCCCCGGGGATGGGGGG
CTTTTGTCCCCGCGCGGTAGCCGTTATTATGGGTGCATAATGTGTTCAAT
CTGCAGTTATGTACATGCCTGATATTTAGTTGGGGGGGGGGGGGGGGGCA
TCGCCCCTTGGAAGGATAGATACGCCGCGGGTGTTTTTTTGTGTTGGGTC
TATATTTTTTCCACTCTCGTTTTTTAACCTGGTTTTTGTTGGGGGGGGGG
GGGGGGGGGGGCATCGCCCCTTGGAAGAGTAGATACGGCAGTAGCGCCGC
CGCAGCCGCAGCAGCAGCAGGGCCAGAATGTTTACTTGCGCGCATGTTTC
ACCGTCCGTATCTTTTCTGCGCCGATTTTTATTACATATGTACATAGATG
CATGTAGGATCAGGGTCTTTTGTATTTTAGGCGTAACATGCGTATTTATC
GGTATGAACACGGGGTCCACCCCCCCCGACCCCGGTTGTGTCGTCTAGCC
AGTCGTAGTGGAGGAAGGGGGCCAGTGAGGCAGACGAGGAATAAGCCAGT
AATGGGAAGGAAAAAAACAACACACTTCTACATACATACATACCTGGCAC
AATGGATGTGCGCTGGAGGCCGCTGATTATTCAATTGGCACCCTTTCAGG
CAGAACCACTCACTTCCGCCACCGTTTCGCACGTGTGCACCTACACAATA
TAGAGCAGATACACACAAAATTGGCGTGTCTACTCACCTCTCTCTCTCTC
TCCGTGTGCACCTGTACAATACAGAGCAGATACACACGAAATCGGCGTGT
CTATTCATCTCTCTCTCTCTCTCTCTCTCTCGTCCCCGCCTTGTGCTCGA
GCCTGGGCCCCTCTGCCCCTCCTTGCCCAGCAGCGAGGCACTCTCAAAAA
GAGGGGCTTGCTTTTTACTCTATTTATCTATTTATGGGATATGTACATAT
TTAACAATGACGTTTTCAAAAGAACTGCCGTCCCCCCGCTCCCTCTCCTG
GCACACACGACCCCGCAGCGCAAAGAGATGACGGACACGATTAAAGCCGA
CCTCGAGCGCCTGTTTCCGACCGGCTGCGGCGACCACTTTCTGGCGCCGG
CGAGGCAGGAGCTCCTTCTCAGCGTGCTCTCGCTGTGGGCAGACTTGAAC
ACGGCGACCGCGTACCGCCAGGTAACTCTTCGTTATATCTTGTAGTCTTC
TATAGAGTGTTAAGGTTTTGCTAAAGAAGACTAGACCTGGTGTTTCCCTT
TCCCGTCTTTGGGGGGGCGCCGCTGTTGAGGGCGCTCCCGCATATTATGC
ACAGCAGCACAAAAGTCTTACCACAACAATACCGGAGATTCCCCACTTAT
CGGCGCCGCGACGAAACGCCAGACCACGGGAGAAAAAAACACGCCTGTTT
TGGATTCGAGCTCGTGCCGAACGGTGTTGACTCACAATATGTATCACTCC
ACCAAAACCTACGCCCCATCGTTTTAAACCACCACCACCGGCCAGGGGAT
GCACGAGGTCCTGGCCCCGCTGATCCTCGCGCTCGAGAAGGAGGCCGCTG
CGGCCTCTCGCTCGGACACCACCGGCGGGCGCTCTGCCGCGGCCGCGGCA
GCGGCGGCGCCCGCGGCGGCGGCGGCGGCTGCGAAAGCGACG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10734:2668..5709-

>mRNA_L-elsbetiae_contig10734.684.1 ID=mRNA_L-elsbetiae_contig10734.684.1|Name=mRNA_L-elsbetiae_contig10734.684.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1326bp|location=Sequence derived from alignment at L-elsbetiae_contig10734:2668..5709- (Laminarionema elsbetiae ELsaHSoW15)
ATGATGATGGGCGAAGATGAAGAACAATATACGGAAGAGCCCCAGATTCC
TTCCTCGCTCAATTTGCCACTTTTGAGCCGCGACGATGCCACTTGGAAGG
AGTTTGGTGCGGACATAATGGCCGATGCTGCTCTCCGAGATGATGATGGG
CGAAGATGAAGAACAATATACGGAAGAGCCCCAGATTCCTTCCTCGCTCA
ATTTGCCACTTTTGAGCCGCGACGATGCCACTTGGAAGGAGTTTGGTGCG
GACATAATGGCCGATGCTGCTCTCCGAGGCGAGTGGAAAGACGACAACAC
TCGAGCCCTGCTGTGGAGACTGCTGCTAGGCGTGATACCGGGAGGTTCGC
CCCCGTCGGAGTGGGCGAAGGAGATGGCCAGCAAGCGGGCGCAGCACCGC
CGTCTCGCCGCGGAGCACAGGGTCGACATCGTCAACATGTCGGCAAATCC
GCTGCTTCCAGGGTCGGGGTCGGGCGACGATCCCTGGAGTCATTTTTACC
AGGCGAGTGGAAAGACGACAACACTCGAGCCCTGCTGTGGAGACTGCTGC
TAGGCGTGATACCGGGAGGTTCGCCCCCGTCGGAGTGGGCGAAGGAGATG
GCCAGCAAGCGGGCGCAGCACCGCCGTCTCGCCGCGGAGCACAGGGTCGA
CATCGTCAACATGTCGGCAAATCCGCTGCTTCCAGGGTCGGGGTCGGGCG
ACGATCCCTGGAGTCATTTTTACCAGCGCAAAGAGATGACGGACACGATT
AAAGCCGACCTCGAGCGCCTGTTTCCGACCGGCTGCGGCGACCACTTTCT
GGCGCCGGCGAGGCAGGAGCTCCTTCTCAGCGTGCTCTCGCTGTGGGCAG
ACTTGAACACGGCGACCGCGTACCGCCAGCGCAAAGAGATGACGGACACG
ATTAAAGCCGACCTCGAGCGCCTGTTTCCGACCGGCTGCGGCGACCACTT
TCTGGCGCCGGCGAGGCAGGAGCTCCTTCTCAGCGTGCTCTCGCTGTGGG
CAGACTTGAACACGGCGACCGCGTACCGCCAGGGGATGCACGAGGTCCTG
GCCCCGCTGATCCTCGCGCTCGAGAAGGAGGCCGCTGCGGCCTCTCGCTC
GGACACCACCGGCGGGCGCTCTGCCGCGGCCGCGGCAGCGGCGGCGCCCG
CGGCGGCGGCGGCGGCTGCGAAAGCGACGGGGATGCACGAGGTCCTGGCC
CCGCTGATCCTCGCGCTCGAGAAGGAGGCCGCTGCGGCCTCTCGCTCGGA
CACCACCGGCGGGCGCTCTGCCGCGGCCGCGGCAGCGGCGGCGCCCGCGG
CGGCGGCGGCGGCTGCGAAAGCGACG
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