mRNA_L-elsbetiae_contig21101.6420.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21101.6420.1 vs. uniprot
Match: D7G8U2_ECTSI (1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8U2_ECTSI) HSP 1 Score: 313 bits (803), Expect = 6.430e-100 Identity = 162/168 (96.43%), Postives = 166/168 (98.81%), Query Frame = 2 Query: 2 VYPHKILTGRRDRMSTLRQSGGLSGFAKRSESEYDCFGAGHSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKLDEYARGAL 505 VYPHKILTGRRDRM +LRQSGGLSGFAKRSESE+DCFGAGHSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAK+DEYARG + Sbjct: 164 VYPHKILTGRRDRMHSLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMM 331
BLAST of mRNA_L-elsbetiae_contig21101.6420.1 vs. uniprot
Match: K8Z520_NANGC (1-deoxy-D-xylulose-5-phosphate synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z520_NANGC) HSP 1 Score: 253 bits (645), Expect = 2.190e-76 Identity = 132/168 (78.57%), Postives = 147/168 (87.50%), Query Frame = 2 Query: 2 VYPHKILTGRRDRMSTLRQSGGLSGFAKRSESEYDCFGAGHSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKLDEYARGAL 505 VYPHKILTGRRDRM +LRQ+ GLSGFAKRSESEYD FGAGHSSTSIS+A+GMSVGK +KR NNCVAVIGDGAITGGMAFEA+N AGYL R +VILNDNGQVSLPTGTHSAGGVVPAGALSSYT RL+SS+ F+ R AK N+L+PS IQ++NAKLDEYARG + Sbjct: 193 VYPHKILTGRRDRMHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISAALGMSVGKLLTNKRVNNCVAVIGDGAITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSKPFQDFRSFAKGLNRLMPSEIQDINAKLDEYARGLI 360
BLAST of mRNA_L-elsbetiae_contig21101.6420.1 vs. uniprot
Match: A0A7S2XNI8_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNI8_9STRA) HSP 1 Score: 241 bits (616), Expect = 7.370e-73 Identity = 122/165 (73.94%), Postives = 141/165 (85.45%), Query Frame = 2 Query: 5 YPHKILTGRRDRMSTLRQSGGLSGFAKRSESEYDCFGAGHSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKLDEYARG 499 Y HK+LTGRRDR TLRQ+GGLSGF KRSESEYDCFGAGHSSTSIS+A GMSV KS L+KR+NNC+AVIGDGAITGGMA+EAMN AGYL R +V+LNDNGQVSLPTGT SAGGV+PA LS+YT L+ S+ F+ RD AK+FN+LLP N+Q VN ++DEYARG Sbjct: 136 YGHKVLTGRRDRFPTLRQAGGLSGFCKRSESEYDCFGAGHSSTSISAAQGMSVAKSLLNKRKNNCIAVIGDGAITGGMAYEAMNNAGYLKNRMIVVLNDNGQVSLPTGTQSAGGVIPASQLSAYTSNLLVSKPFQDFRDFAKSFNRLLPENVQGVNKRIDEYARG 300
BLAST of mRNA_L-elsbetiae_contig21101.6420.1 vs. uniprot
Match: A0A8J2SUK2_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUK2_9STRA) HSP 1 Score: 241 bits (615), Expect = 8.720e-73 Identity = 123/165 (74.55%), Postives = 139/165 (84.24%), Query Frame = 2 Query: 5 YPHKILTGRRDRMSTLRQSGGLSGFAKRSESEYDCFGAGHSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKLDEYARG 499 YPHKILTGRR RM TLRQ GGLSGF KR+ESEYDCFGAGHS+TSIS+A+GMSVGKSQ K++NNC+AVIGDGAITGGMAFEAMN A YL R + +LNDNGQVSLPTGT SAGGVVP+GALS+YT RL+SS+ F R VAK + L P IQ +NAK+DEYARG Sbjct: 137 YPHKILTGRRSRMGTLRQQGGLSGFQKRAESEYDCFGAGHSTTSISAALGMSVGKSQKGKQQNNCIAVIGDGAITGGMAFEAMNNANYLQARMITVLNDNGQVSLPTGTPSAGGVVPSGALSAYTSRLISSKPFADFRQVAKGISSLFPEEIQQINAKIDEYARG 301
BLAST of mRNA_L-elsbetiae_contig21101.6420.1 vs. uniprot
Match: B7S452_PHATC (1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7S452_PHATC) HSP 1 Score: 239 bits (610), Expect = 4.680e-72 Identity = 124/165 (75.15%), Postives = 140/165 (84.85%), Query Frame = 2 Query: 5 YPHKILTGRRDRMSTLRQSGGLSGFAKRSESEYDCFGAGHSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKLDEYARG 499 YPHKILTGRRDRMSTLRQSGG+SGF KR ESEYD FGAGHSSTSIS A GMS+GKS L+KR+NNC+AVIGDGAITGGMA+EAMN AGYL R +VILNDNGQVSLPTGT SAGG+VPA LS+YT L+ S+ F+ R AK FNKLLP +Q+VN ++DEYARG Sbjct: 128 YPHKILTGRRDRMSTLRQSGGISGFCKRKESEYDSFGAGHSSTSISVAQGMSIGKSILNKRQNNCIAVIGDGAITGGMAYEAMNSAGYLKNRMIVILNDNGQVSLPTGTPSAGGIVPASQLSTYTSNLLVSKPFQDFRMFAKNFNKLLPEGVQDVNKRIDEYARG 292
BLAST of mRNA_L-elsbetiae_contig21101.6420.1 vs. uniprot
Match: A0A7S1Z117_TRICV (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z117_TRICV) HSP 1 Score: 239 bits (609), Expect = 7.740e-72 Identity = 121/165 (73.33%), Postives = 139/165 (84.24%), Query Frame = 2 Query: 5 YPHKILTGRRDRMSTLRQSGGLSGFAKRSESEYDCFGAGHSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKLDEYARG 499 YPHKILTGRR+RMSTLRQ GG+SGF KR ES+YD FGAGHSSTSIS A GMSV K L+KRRNNC+AVIGDGAITGGMA+EAMN AGYL R +V+LNDNGQVSLPTGT SAGGV+PA LS+YT L+ S+ F+ RD AK+FNKLLP+ +Q VN ++DEYARG Sbjct: 134 YPHKILTGRRERMSTLRQMGGISGFCKRKESKYDSFGAGHSSTSISVAQGMSVAKKMLNKRRNNCIAVIGDGAITGGMAYEAMNSAGYLRSRMIVVLNDNGQVSLPTGTQSAGGVIPASQLSAYTSNLLVSKPFQDFRDFAKSFNKLLPTEVQGVNKRIDEYARG 298
BLAST of mRNA_L-elsbetiae_contig21101.6420.1 vs. uniprot
Match: A0A7S1XP62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XP62_9STRA) HSP 1 Score: 234 bits (597), Expect = 9.610e-72 Identity = 117/166 (70.48%), Postives = 139/166 (83.73%), Query Frame = 2 Query: 2 VYPHKILTGRRDRMSTLRQSGGLSGFAKRSESEYDCFGAGHSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKLDEYARG 499 VYPHKILTGRR+RM TLRQ GG+SGFAK ESEYD FGAGHSSTSIS+A+GMS GK Q+ K++N C+AVIGDGAITGGMA+EAMN AGYL R +VILNDN QVSLPTGT S GG VP+GALS+ T R+++S+ F+ VRDVAK N+L+P +Q +N K+DEYARG Sbjct: 157 VYPHKILTGRRERMDTLRQYGGISGFAKMKESEYDAFGAGHSSTSISAALGMSEGKRQMRKKQNQCIAVIGDGAITGGMAYEAMNSAGYLNSRMLVILNDNAQVSLPTGTPSVGGTVPSGALSAATSRMLASKPFQDVRDVAKTLNRLMPDRVQEINKKIDEYARG 322
BLAST of mRNA_L-elsbetiae_contig21101.6420.1 vs. uniprot
Match: A0A7S0UP39_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UP39_9STRA) HSP 1 Score: 236 bits (602), Expect = 3.410e-71 Identity = 121/165 (73.33%), Postives = 138/165 (83.64%), Query Frame = 2 Query: 5 YPHKILTGRRDRMSTLRQSGGLSGFAKRSESEYDCFGAGHSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKLDEYARG 499 YPHKILTGRRDR TLRQ GGLSGF KR ESEYD FGAGHSSTSIS+A GMS+ KS L+KR+NNCVAVIGDGAITGGMA+EAMN AGYL R +V+LNDNGQVSLPTGT SAGG VPA LS+YT L+ S+ F+ RD AK+FNKLLP ++Q+VN ++DEY RG Sbjct: 77 YPHKILTGRRDRFPTLRQLGGLSGFCKRKESEYDSFGAGHSSTSISAAQGMSIAKSVLNKRKNNCVAVIGDGAITGGMAYEAMNSAGYLQSRMIVVLNDNGQVSLPTGTPSAGGTVPASQLSTYTSNLLVSKPFQDFRDFAKSFNKLLPEDVQSVNKRIDEYTRG 241
BLAST of mRNA_L-elsbetiae_contig21101.6420.1 vs. uniprot
Match: F0YNL7_AURAN (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNL7_AURAN) HSP 1 Score: 234 bits (598), Expect = 7.760e-71 Identity = 121/165 (73.33%), Postives = 137/165 (83.03%), Query Frame = 2 Query: 5 YPHKILTGRRDRMSTLRQSGGLSGFAKRSESEYDCFGAGHSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKLDEYARG 499 YPHKILTGRR RM TLRQ GLSGF KR+ESEYD FGAGHSSTSIS+A+GMSVGKSQ + +NNC+AVIGDGAITGGMAFEAMN A YL R + +LNDNGQVSLPTGT SAGGV+P+GALS+YT RL+SS+ F R VAK + L PS IQ +NAK+DEYARG Sbjct: 64 YPHKILTGRRSRMGTLRQQDGLSGFQKRAESEYDAFGAGHSSTSISAALGMSVGKSQKGRAQNNCIAVIGDGAITGGMAFEAMNNANYLQARMITVLNDNGQVSLPTGTPSAGGVIPSGALSAYTSRLISSKPFADFRQVAKGISSLFPSEIQAINAKIDEYARG 228
BLAST of mRNA_L-elsbetiae_contig21101.6420.1 vs. uniprot
Match: A0A7S2YSG5_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSG5_9STRA) HSP 1 Score: 235 bits (600), Expect = 1.540e-70 Identity = 121/165 (73.33%), Postives = 139/165 (84.24%), Query Frame = 2 Query: 5 YPHKILTGRRDRMSTLRQSGGLSGFAKRSESEYDCFGAGHSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDGAITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSRSFKSVRDVAKAFNKLLPSNIQNVNAKLDEYARG 499 YPHKILTGRR +M+ LRQSGG+SGF KR ESEYD FGAGHSSTSIS+A GMS+ KS L KR+NNC+AVIGDGAITGGMA+EAMN AGYL R +VILNDNGQVSLPTGT SAGGVVPA LS+YT L+ S+ F+ +R AK+FNKLLP +IQ VN ++DEYARG Sbjct: 138 YPHKILTGRRFKMAGLRQSGGISGFCKRKESEYDSFGAGHSSTSISAAQGMSIAKSMLKKRKNNCIAVIGDGAITGGMAYEAMNSAGYLKNRMIVILNDNGQVSLPTGTPSAGGVVPASQLSTYTSNLLVSKPFQDIRSFAKSFNKLLPEDIQTVNKRIDEYARG 302 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21101.6420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21101.6420.1 >prot_L-elsbetiae_contig21101.6420.1 ID=prot_L-elsbetiae_contig21101.6420.1|Name=mRNA_L-elsbetiae_contig21101.6420.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=170bp GLPPQDPDRAERSDEHAAAERGPVRVRQAVGVGVRLLRGGALFHLHLVSHback to top mRNA from alignment at L-elsbetiae_contig21101:108..2264+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21101.6420.1 ID=mRNA_L-elsbetiae_contig21101.6420.1|Name=mRNA_L-elsbetiae_contig21101.6420.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2157bp|location=Sequence derived from alignment at L-elsbetiae_contig21101:108..2264+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21101:108..2264+ >mRNA_L-elsbetiae_contig21101.6420.1 ID=mRNA_L-elsbetiae_contig21101.6420.1|Name=mRNA_L-elsbetiae_contig21101.6420.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1020bp|location=Sequence derived from alignment at L-elsbetiae_contig21101:108..2264+ (Laminarionema elsbetiae ELsaHSoW15)back to top |