mRNA_L-elsbetiae_contig21019.6371.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21019.6371.1 vs. uniprot
Match: D7FQE9_ECTSI (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQE9_ECTSI) HSP 1 Score: 305 bits (781), Expect = 2.050e-98 Identity = 161/184 (87.50%), Postives = 165/184 (89.67%), Query Frame = 1 Query: 1 EYVALLKTVFDFPSLKALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASDL--------------SAAEAAAEPPSLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCEKQGVPMFETPTGWKFFG 510 EYVALLKTVFDFP+L+ALLARPDFSFVFDGMHGVAGAYASRVFVDELGA EESLLRCDPREDFGGSHPDPNLAYAS L AA AAEPP+LGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCE+QGVPMFETPTGWKFFG Sbjct: 218 EYVALLKTVFDFPTLRALLARPDFSFVFDGMHGVAGAYASRVFVDELGASEESLLRCDPREDFGGSHPDPNLAYASGLVRRMGLDSSAQPLQGAAADAAEPPTLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCERQGVPMFETPTGWKFFG 401
BLAST of mRNA_L-elsbetiae_contig21019.6371.1 vs. uniprot
Match: A0A7S3W6Y8_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W6Y8_9SPIT) HSP 1 Score: 224 bits (570), Expect = 5.590e-69 Identity = 111/175 (63.43%), Postives = 139/175 (79.43%), Query Frame = 1 Query: 1 EYVALLKTVFDFPSLKALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASDLSA-----AEAAAEPPSLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCEKQGVPMFETPTGWKFFG 510 +YV L+ ++FDF ++++LLARPD SFVFD MHGVAG YA +F + LG P+++LL C+P EDF G HPDPNL YA+ L+ + EPP +GAAADGDADRNMI+GRRFFVTPSDS+AVIAA+A A+P+ +RAGGL ARSMPTSGALDRV + G+P+FETPTGWK+FG Sbjct: 219 DYVKLMSSLFDFDAIRSLLARPDMSFVFDAMHGVAGPYARAIFAEILGVPQDALLNCEPSEDFNGGHPDPNLTYAAALATLMGLNGQTPDEPPVIGAAADGDADRNMIVGRRFFVTPSDSVAVIAAHADALPWLSRAGGLKALARSMPTSGALDRVASQLGLPLFETPTGWKYFG 393
BLAST of mRNA_L-elsbetiae_contig21019.6371.1 vs. uniprot
Match: PGMC_BROIN (Phosphoglucomutase, cytoplasmic n=54 Tax=BOP clade TaxID=359160 RepID=PGMC_BROIN) HSP 1 Score: 223 bits (567), Expect = 6.390e-67 Identity = 119/176 (67.61%), Postives = 133/176 (75.57%), Query Frame = 1 Query: 1 EYVALLKTVFDFPSLKALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASDLS-----AAEAAAEPPSLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAA-AVPYFARAGGLGGAARSMPTSGALDRVCEKQGVPMFETPTGWKFFG 510 EYV L+KT+FDF S+K LLA P FSF FDGMHGVAGAYA R+FVDELGA E SLL C P+EDFGG HPDPNL YA +L + EPP GAAADGDADRNMILG+RFFVTPSDS+A+IAANA ++PYFA GL G ARSMPTS ALD V + + FE PTGWKFFG Sbjct: 199 EYVKLMKTIFDFESIKKLLASPKFSFCFDGMHGVAGAYAKRIFVDELGASESSLLNCVPKEDFGGGHPDPNLTYAKELVDRMGLGKTSNVEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIAANAVQSIPYFAS--GLKGVARSMPTSAALDVVAKNLNLKFFEVPTGWKFFG 372
BLAST of mRNA_L-elsbetiae_contig21019.6371.1 vs. uniprot
Match: I0Z9B1_COCSC (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z9B1_COCSC) HSP 1 Score: 222 bits (565), Expect = 1.450e-66 Identity = 118/178 (66.29%), Postives = 133/178 (74.72%), Query Frame = 1 Query: 1 EYVALLKTVFDFPSLKALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASDL-------SAAEAAAEPPSLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAA-AVPYFARAGGLGGAARSMPTSGALDRVCEKQGVPMFETPTGWKFFG 510 +Y+ LL+ ++DF +L ALL RPDF F FDGMHGVAG YA R+FV ELGAPE S L CDP+EDFGG HPDPNL YA L + AAAE P+ GAA DGDADRNMILG RFFVTPSDS+A+IAANA AVPYF GL G ARSMPTS ALDRV E +G+ +E PTGWKFFG Sbjct: 206 DYLKLLRKIYDFNALSALLRRPDFKFAFDGMHGVAGPYAKRIFVQELGAPESSCLNCDPKEDFGGGHPDPNLTYAHHLVDTMGLGEHSSAAAEVPAFGAACDGDADRNMILGARFFVTPSDSVAIIAANAKEAVPYFHS--GLKGVARSMPTSAALDRVAEAKGIKCYEVPTGWKFFG 381
BLAST of mRNA_L-elsbetiae_contig21019.6371.1 vs. uniprot
Match: A0A446RS67_TRITD (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=4 Tax=Pooideae TaxID=147368 RepID=A0A446RS67_TRITD) HSP 1 Score: 219 bits (557), Expect = 1.740e-66 Identity = 115/176 (65.34%), Postives = 133/176 (75.57%), Query Frame = 1 Query: 1 EYVALLKTVFDFPSLKALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASDLS-----AAEAAAEPPSLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAA-AVPYFARAGGLGGAARSMPTSGALDRVCEKQGVPMFETPTGWKFFG 510 +Y+ L+KT+FDF S+K LLA P FSF FDG+HGVAGAYA R+FVDELGA E SLL C P+EDFGG HPDPNL YA +L + EPP GAAADGDADRNM+LG+RFFVTPSDS+A+IAANA ++PYFA GL G ARSMPTS ALD V + + FE PTGWKFFG Sbjct: 90 DYIKLMKTIFDFESIKKLLASPKFSFCFDGLHGVAGAYAKRMFVDELGASESSLLNCVPKEDFGGGHPDPNLTYAKELVDRMGLGKTSNVEPPEFGAAADGDADRNMVLGKRFFVTPSDSVAIIAANAVQSIPYFAS--GLKGVARSMPTSAALDVVAKNLNLKFFEVPTGWKFFG 263
BLAST of mRNA_L-elsbetiae_contig21019.6371.1 vs. uniprot
Match: A0A453H7K6_AEGTS (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=5 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453H7K6_AEGTS) HSP 1 Score: 219 bits (557), Expect = 5.280e-66 Identity = 115/176 (65.34%), Postives = 133/176 (75.57%), Query Frame = 1 Query: 1 EYVALLKTVFDFPSLKALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASDLS-----AAEAAAEPPSLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAA-AVPYFARAGGLGGAARSMPTSGALDRVCEKQGVPMFETPTGWKFFG 510 +Y+ L+KT+FDF S+K LLA P FSF FDG+HGVAGAYA R+FVDELGA E SLL C P+EDFGG HPDPNL YA +L + EPP GAAADGDADRNM+LG+RFFVTPSDS+A+IAANA ++PYFA GL G ARSMPTS ALD V + + FE PTGWKFFG Sbjct: 268 DYIKLMKTIFDFESIKKLLASPKFSFCFDGLHGVAGAYAKRMFVDELGASESSLLNCVPKEDFGGGHPDPNLTYAKELVDRMGLGKTSNVEPPEFGAAADGDADRNMVLGKRFFVTPSDSVAIIAANAVQSIPYFAS--GLKGVARSMPTSAALDVVAKNLNLKFFEVPTGWKFFG 441
BLAST of mRNA_L-elsbetiae_contig21019.6371.1 vs. uniprot
Match: PGMC2_ARATH (Probable phosphoglucomutase, cytoplasmic 2 n=13 Tax=Camelineae TaxID=980083 RepID=PGMC2_ARATH) HSP 1 Score: 220 bits (560), Expect = 7.490e-66 Identity = 115/178 (64.61%), Postives = 136/178 (76.40%), Query Frame = 1 Query: 1 EYVALLKTVFDFPSLKALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASDLSAA-------EAAAEPPSLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAA-AVPYFARAGGLGGAARSMPTSGALDRVCEKQGVPMFETPTGWKFFG 510 +YV L+K++FDF S+K LL+ P F+F +D +HGVAGAYA R+FV+ELGAPE SLL C P+EDFGG HPDPNL YA +L A +A EPP GAAADGDADRNMILG+RFFVTPSDS+A+IAANA A+PYF+ GL G ARSMPTS ALD V + G+ FE PTGWKFFG Sbjct: 200 DYVKLMKSIFDFESIKKLLSYPKFTFCYDALHGVAGAYAHRIFVEELGAPESSLLNCVPKEDFGGGHPDPNLTYAKELVARMGLSKTDDAGGEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIAANAVGAIPYFSS--GLKGVARSMPTSAALDVVAKNLGLKFFEVPTGWKFFG 375
BLAST of mRNA_L-elsbetiae_contig21019.6371.1 vs. uniprot
Match: A0A6J1FFU3_CUCMO (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=1 Tax=Cucurbita moschata TaxID=3662 RepID=A0A6J1FFU3_CUCMO) HSP 1 Score: 216 bits (550), Expect = 2.810e-65 Identity = 112/177 (63.28%), Postives = 135/177 (76.27%), Query Frame = 1 Query: 1 EYVALLKTVFDFPSLKALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASDLSA------AEAAAEPPSLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAA-AVPYFARAGGLGGAARSMPTSGALDRVCEKQGVPMFETPTGWKFFG 510 +YV L+K++FDF S++ LL+ P FSF +D +HGVAGAYA R+FV+ELGA E SLL C P+EDFGG HPDPNL YA +L A + + EPP GAAADGDADRNM+LG+RFFVTPSDS+A+IAANA A+PYF+ GGL G ARSMPTS ALD V + + FE PTGWKFFG Sbjct: 200 DYVKLMKSIFDFESIRKLLSSPKFSFCYDALHGVAGAYAKRIFVEELGAKESSLLNCVPKEDFGGGHPDPNLTYAKELVARMGLGKSSSGQEPPEFGAAADGDADRNMVLGKRFFVTPSDSVAIIAANAVEAIPYFS--GGLKGVARSMPTSAALDVVAKNLNLKFFEVPTGWKFFG 374
BLAST of mRNA_L-elsbetiae_contig21019.6371.1 vs. uniprot
Match: A0A7S0NZK6_9EUKA (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NZK6_9EUKA) HSP 1 Score: 219 bits (559), Expect = 4.750e-65 Identity = 111/180 (61.67%), Postives = 137/180 (76.11%), Query Frame = 1 Query: 1 EYVALLKTVFDFPSLKALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASDL----------SAAEAAAEPPSLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAAVPYFARAGGLGGAARSMPTSGALDRVCEKQGVPMFETPTGWKFFG 510 +++AL++ +FDFP LKALLAR D SF FD MHGVAG YA+++FV+ELG +L C+PR+DFGG HPDPNL YAS L + E + PP LGAAADGD DRNMILG+RFFVTPSDS+A+IAA+A A+P+ A+ GGL ARSMPTS ALDRV + G+P++ETPTGWKFFG Sbjct: 271 DWLALMRQLFDFPRLKALLAREDMSFCFDAMHGVAGVYAAKLFVEELGVAPTALRNCEPRDDFGGGHPDPNLTYASQLVETMGLLSDGAINERTSSPPELGAAADGDGDRNMILGKRFFVTPSDSVAIIAAHAHALPWLAKLGGLRALARSMPTSAALDRVAQALGLPLYETPTGWKFFG 450
BLAST of mRNA_L-elsbetiae_contig21019.6371.1 vs. uniprot
Match: A0A0G4GZX3_VITBC (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GZX3_VITBC) HSP 1 Score: 217 bits (553), Expect = 6.490e-65 Identity = 113/178 (63.48%), Postives = 130/178 (73.03%), Query Frame = 1 Query: 1 EYVALLKTVFDFPSLKALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPEESLLRCDPREDFGGSHPDPNLAYASDLSAAEAAAEP-------PSLGAAADGDADRNMILGRRFFVTPSDSLAVIAANAAA-VPYFARAGGLGGAARSMPTSGALDRVCEKQGVPMFETPTGWKFFG 510 +YVALLKT+FDFP L+ + RPDFS V+DGMHGVAG Y R+F +ELG P L CDP+EDFGG HPDPNL YA DL +P P GAA DGD DRNMILG+ FFVTPSDS+AVIA+ A+A +PYF GL G +RSMPTSGALDRV EK G+ M+ETPTGWKFFG Sbjct: 191 DYVALLKTIFDFPKLQTFVKRPDFSMVYDGMHGVAGPYGKRIFCEELGLPSSCLTNCDPKEDFGGGHPDPNLVYAHDLVEVMKVLKPDSIIESTPEFGAAGDGDCDRNMILGKGFFVTPSDSVAVIASLASASIPYFKS--GLKGVSRSMPTSGALDRVAEKMGLAMYETPTGWKFFG 366 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21019.6371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21019.6371.1 >prot_L-elsbetiae_contig21019.6371.1 ID=prot_L-elsbetiae_contig21019.6371.1|Name=mRNA_L-elsbetiae_contig21019.6371.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=170bp EYVALLKTVFDFPSLKALLARPDFSFVFDGMHGVAGAYASRVFVDELGAPback to top mRNA from alignment at L-elsbetiae_contig21019:385..1414- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21019.6371.1 ID=mRNA_L-elsbetiae_contig21019.6371.1|Name=mRNA_L-elsbetiae_contig21019.6371.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1030bp|location=Sequence derived from alignment at L-elsbetiae_contig21019:385..1414- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21019:385..1414- >mRNA_L-elsbetiae_contig21019.6371.1 ID=mRNA_L-elsbetiae_contig21019.6371.1|Name=mRNA_L-elsbetiae_contig21019.6371.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1020bp|location=Sequence derived from alignment at L-elsbetiae_contig21019:385..1414- (Laminarionema elsbetiae ELsaHSoW15)back to top |