mRNA_L-elsbetiae_contig2101.6370.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2101.6370.1
Unique NamemRNA_L-elsbetiae_contig2101.6370.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig2101.6370.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI)

HSP 1 Score: 355 bits (911), Expect = 3.730e-122
Identity = 173/220 (78.64%), Postives = 192/220 (87.27%), Query Frame = 1
Query:   49 MVKYTALFALASALYASCADAKEFKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTIEVDETACPNPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKAFPPAFDAGTEANNELCSHIPGPACGMESGNMQDGPGEGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFIAAQ 708
            MVK+TA FALAS L  S A A +FKVRVRNLTY QPFSP L+VAHTNDVALFKEG PASDAIKLMAEDG+NS LLELA S DVAPYICGAVA +GPVFPGETWRGT+ +DE+ACP+P YSVV+MLI+TNDAF+GIDSD LN+ G+ K FPPAFDAGTEANNELC+HIPGPAC  +SGNM+D PGE FIH+HRGFHGVG +L EA YDWRNPVAEVFIA Q
Sbjct:    1 MVKFTAGFALASVL--SLAHATDFKVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIARQ 218          
BLAST of mRNA_L-elsbetiae_contig2101.6370.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 8.170e-111
Identity = 160/222 (72.07%), Postives = 184/222 (82.88%), Query Frame = 1
Query:   49 MVKYTALFALASALYASCADAKE-----FKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTIEVDETACPNPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKAFPPAFDAGTEANNELCSHIPGPACGMESGNMQDGPGEGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFI 699
            MV +TA FA+AS +  + A  K+     FKVRVRNLTY QPFSPPLIVAHT DVALFKEGFPA+DAIKLMAEDG+NS LLEL+ES+DVAPYICG V A+GPVFPGETWRG ++VD   CPNP YSVVTMLI+TNDAF+GIDSD L + G+ KAFPPAFDAGTE N+E CS+IPGP C   SGN Q+GPGEG+IH+HRG HGVG +L EA YDWRNPVAE++I
Sbjct:    1 MVNFTAAFAMASLVSLANASGKDYNTVPFKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGVVVAEGPVFPGETWRGQLDVDPYICPNPVYSVVTMLINTNDAFVGIDSDTLEL-GSTKAFPPAFDAGTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGVG-DLEEASYDWRNPVAEIYI 220          
BLAST of mRNA_L-elsbetiae_contig2101.6370.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 3.160e-101
Identity = 141/200 (70.50%), Postives = 166/200 (83.00%), Query Frame = 1
Query:  103 ADAKEFKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTIEVDETACPNPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKAFPPAFDAGTEANNELCSHIPGPACGMESGNMQDGPGEGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFIA 702
            A+A E  VRVRNLTY QPFSP  +VAHTNDV++F+EGFPASDA+K+MAEDG+NS L+EL  S DV PYICG V  + P+FPG+TWRG + VDE+ CP+ QYSVV+MLI+TNDAF+GIDS+ L   G  K FPPAFDAGTEANNELC+HIPGPAC  +SGNM+DGPGEGFI + RGFHGVG +L EA YDWRNPVAEV +A
Sbjct:    2 ANAGEVYVRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICGGVMGEAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRLV--GTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGPDLGEANYDWRNPVAEVVVA 199          
BLAST of mRNA_L-elsbetiae_contig2101.6370.1 vs. uniprot
Match: D7G3Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z4_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 2.100e-57
Identity = 103/196 (52.55%), Postives = 126/196 (64.29%), Query Frame = 1
Query:  121 KVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTIEVDETACPNPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKAFPPAFDAGTEANNELCSHIPGPACGMESGNMQD-GPG-EGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFIA 702
            KVRV NLT++Q FSPP+IVAH     LF  G  A  AIKLMAEDGNN  ++ +A         CG  AA+GP+ PG+TW G I  D   C  P YSVV  L +TNDAF+GID          K FPPAFDAGTE NNE C+ +PG AC     + ++ G G EGFIH+HRG +GVG +LS+A Y W+NPVAEV ++
Sbjct:   76 KVRVTNLTFKQDFSPPIIVAHEKGSHLFPVGGKARPAIKLMAEDGNNRNIMAIATREG---GFCGFAAAEGPLLPGKTWNGEITFDTDKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKHPSKLFPPAFDAGTEKNNEKCTCMPGRACPASPKSRENHGLGSEGFIHVHRGINGVG-DLSKADYGWKNPVAEVVVS 267          
BLAST of mRNA_L-elsbetiae_contig2101.6370.1 vs. uniprot
Match: D7G413_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G413_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 1.760e-56
Identity = 101/198 (51.01%), Postives = 123/198 (62.12%), Query Frame = 1
Query:  118 FKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTIEVDETACPNPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKAFPPAFDAGTEANNELCSHIPGPACGMESG---NMQDGPGEGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFIA 702
            +KVRV NLT++Q FSPP+IVAH     LF +G  A  AIK MAE+G N  +  +A   D     CG  AA+GP+ PG+TW G I  D   C  P YSVV  L +TNDAF+GID          K FPPAFDAGTE NNE C+ I G AC        N+     EGFIH+HRG +GVG +LS+A YDW+NPVAEV ++
Sbjct:    4 YKVRVTNLTFKQDFSPPIIVAHEKGSPLFSKGRKARGAIKRMAEEGVNRFIEIIATRED---GFCGFAAAEGPLLPGKTWNGEITFDANKCKRPVYSVVAKLTNTNDAFMGIDGSKFLDKRPSKLFPPAFDAGTEKNNEKCTCIRGRACPASPKPRENLGGRGSEGFIHVHRGINGVG-DLSQADYDWKNPVAEVVVS 197          
BLAST of mRNA_L-elsbetiae_contig2101.6370.1 vs. uniprot
Match: D7G405_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G405_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 2.280e-54
Identity = 104/215 (48.37%), Postives = 132/215 (61.40%), Query Frame = 1
Query:   67 LFALASALYASCADAKEFKVRVRNLTYQQPFSPPLIVAHTNDVA-LFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTIEVDETACPNPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKAFPPAFDAGTEANNELCSHIPGPACGMESGNMQD-GPG-EGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFIA 702
            + +LAS    S +  K +KVRV NLT++Q FSPP+IVAH      LF  G  A  AIK MAE+G N G++++  + +     CG   A+GP+ PG+TW G I  D   C  P YSVV  L +TNDAF+GID          K FPPAFDAGTE NNE C+ +PG AC       ++ G G EGFIH+HRG  GVG +LS+A Y W NPVAEV ++
Sbjct:    1 MLSLASGGSTSGSSMKTYKVRVTNLTFKQDFSPPIIVAHEKGSRPLFSMGGKARPAIKRMAEEGVN-GMVKVIATRESG--FCGFAVAEGPLLPGKTWNGEITFDTNKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKCPSKRFPPAFDAGTEKNNEKCTCMPGRACPASPKTRENHGRGSEGFIHVHRGIDGVG-DLSKADYGWNNPVAEVVVS 211          
BLAST of mRNA_L-elsbetiae_contig2101.6370.1 vs. uniprot
Match: D7G3Z6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z6_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 1.530e-44
Identity = 98/231 (42.42%), Postives = 133/231 (57.58%), Query Frame = 1
Query:   49 MVKYTALFALASALYASCADA------KEFKVRVRNLTYQQPFSPPLIVAHTNDVA-LFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAAD--GPVFPGETWRGTIEVDETACPNPQYSVVTMLIHTNDAFLGIDSDGLNMNGAV-KAFPPAFDAGTEANNELCSHIPGPACGMESGNMQDGPG---EGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFIA 702
            MVK+    ALAS L  +          + +KVRV NLT++Q FS  +IVAH      LF EG  A +AI ++AE+G +  +  +A         CG  A +  G +FPG+TW G I+ D   C +P YSVV  L +TNDAF+GI            K FPPAFDAG+E NNE C+ +PG AC   + + ++  G   EGFIH+HRGF G+G +LS+  Y W+NPVA V ++
Sbjct:    1 MVKFAFGLALASMLSLASGSKMRGSRMQTYKVRVTNLTFKQDFSAAIIVAHEKGSRPLFSEGAKARNAISMLAEEGLSGNVQNIATR---ERGFCGFAAPESKGLIFPGKTWEGKIQFDANKCKDPVYSVVAKLDNTNDAFMGIAGSKFPAGSCPSKHFPPAFDAGSETNNEKCTCMPGRACPKGTRDARERHGRNSEGFIHVHRGFQGIG-DLSK-DYGWQNPVAVVVVS 226          
BLAST of mRNA_L-elsbetiae_contig2101.6370.1 vs. uniprot
Match: A0A433PQD1_9FUNG (Spondin domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQD1_9FUNG)

HSP 1 Score: 147 bits (372), Expect = 2.340e-40
Identity = 86/203 (42.36%), Postives = 117/203 (57.64%), Query Frame = 1
Query:  112 KEFKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTIEVDETACPNPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKAFPPAFDAGTEANNELCSHIPGPACGMESGNMQDGPGEGFIHIHRGFHGVGGELSEAG----YDWRNPVAEVFIAAQ 708
            K F + V+NL Y QPFSP L V H   + LF+ G PAS A++ +AE G+ S  + L +  D    ICG   A G   P  T++GT+ + +  C NP  S+V ML  TNDAF GI++  L    + +   PA+DAGTE NNE C ++ G  C         G GEGF+H+HRG HG+   +S+ G    YDWRNPVA + ++ Q
Sbjct:   26 KTFDITVQNLAYLQPFSPVLAVIHEPSIYLFQLGTPASAALRAVAEGGDPSKFVALFQ--DGLEGICGWSVAPGKTLPSTTYKGTVTISKP-CTNPHISIVNMLGITNDAFTGINTIPLYGELSKRFEVPAYDAGTEENNEDCQYVFG--CPGSPNLDTPGLGEGFVHVHRGVHGL--NVSKPGLSVDYDWRNPVAYITVSVQ 221          
BLAST of mRNA_L-elsbetiae_contig2101.6370.1 vs. uniprot
Match: A0A525CZJ5_9DELT (Spondin domain-containing protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A525CZJ5_9DELT)

HSP 1 Score: 147 bits (372), Expect = 3.090e-40
Identity = 86/202 (42.57%), Postives = 115/202 (56.93%), Query Frame = 1
Query:   94 ASCADAKEFKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTIEVDETACPNPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKAFPPAFDAGTEANNELCSHIPGPACGMESGNMQDGPGEGFIHIHRGFHGVGGELSEAGYDWRNPVAEVFI 699
            A     + F+V + NLT  Q FSPP+++AH ND  LF  G PAS+A+  +AEDG+ SGL+++AE+    P I G   ADGPV PG +    I+   TA    + SV  ML+ TNDAF  +             +  A+DAG+E N+E CS IPGP CG   G       EG++HIH G HG   ++S A +DW NPVA + I
Sbjct:   41 ALAQGTRTFEVTITNLTGGQIFSPPIVLAHDNDFNLFTLGEPASEALTGLAEDGDTSGLVDMAEN---MPSIYGYAMADGPVLPGTSAVVEIDTHHTA---KRLSVAGMLVTTNDAFFAVRGARTWGIFLEPLYASAYDAGSEVNSENCSDIPGPPCG-NGGVRNTADAEGYVHIHAGIHGTM-DISTAEFDWNNPVALIRI 234          
BLAST of mRNA_L-elsbetiae_contig2101.6370.1 vs. uniprot
Match: A0A2N5X822_9GAMM (Spondin domain-containing protein n=1 Tax=Pseudohalioglobus lutimaris TaxID=1737061 RepID=A0A2N5X822_9GAMM)

HSP 1 Score: 145 bits (365), Expect = 1.980e-39
Identity = 84/218 (38.53%), Postives = 126/218 (57.80%), Query Frame = 1
Query:   61 TALFALASALYASCADAKE---FKVRVRNLTYQQPFSPPLIVAHTNDVALFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPGETWRGTIEVDETACPNPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKAFPPAFDAGTEANNELCSHIPGPACGMESGNMQDGPG-EGFIHIHRGFHGVGGE-LSEAGYDWRNPVAEVFI 699
            T LFA+A  L+A+ A ++E   ++V + N+T  Q F+P L+V H  +V LF+ G  A + ++++AE G+   L E      +AP +      DG + PG+T   T+  +         SV  M+I TND F+ ++   L   G ++   PA+D+GTEAN++ C++IPGP CG        G G EGF+HI  GFH +GG+ LS A YDWRNPVA + +
Sbjct:    4 TRLFAIALTLFATQAISQENVQYEVSITNITLAQSFTPQLVVTHPGNVRLFRLGNKARETLEILAEGGDTGPLTER-----LAPAVDEVKTIDGLLAPGQTTTTTVSAESG---RRFLSVAAMMIPTNDTFMALNRARLPSAGTLEFMVPAYDSGTEANDQNCANIPGPTCGGVGYVGAPGEGDEGFVHISNGFHELGGDTLSPAQYDWRNPVARITV 213          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2101.6370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4K4_ECTSI3.730e-12278.64Spondin domain-containing protein n=3 Tax=Ectocarp... [more]
D7FIE5_ECTSI8.170e-11172.07Spondin domain-containing protein n=1 Tax=Ectocarp... [more]
D7G4K3_ECTSI3.160e-10170.50Spondin domain-containing protein n=1 Tax=Ectocarp... [more]
D7G3Z4_ECTSI2.100e-5752.55Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G413_ECTSI1.760e-5651.01Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G405_ECTSI2.280e-5448.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3Z6_ECTSI1.530e-4442.42Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A433PQD1_9FUNG2.340e-4042.36Spondin domain-containing protein n=1 Tax=Endogone... [more]
A0A525CZJ5_9DELT3.090e-4042.57Spondin domain-containing protein n=1 Tax=Desulfob... [more]
A0A2N5X822_9GAMM1.980e-3938.53Spondin domain-containing protein n=1 Tax=Pseudoha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2101contigL-elsbetiae_contig2101:17302..20023 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score356.3
Seed ortholog evalue1e-95
Seed eggNOG ortholog2880.D7G4K4
Hectar predicted targeting categorysignal peptide
EggNOG OGs28TMI@1,2S5Q9@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size746
Cds size663
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2101.6370.1prot_L-elsbetiae_contig2101.6370.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2101 17350..19988 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815862.5192757-UTR-L-elsbetiae_contig2101:17301..173491622815862.5192757-UTR-L-elsbetiae_contig2101:17301..17349Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2101 17302..17349 +
1691683153.3198853-UTR-L-elsbetiae_contig2101:17301..173491691683153.3198853-UTR-L-elsbetiae_contig2101:17301..17349Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2101 17302..17349 +
1622815862.6148195-UTR-L-elsbetiae_contig2101:19988..200231622815862.6148195-UTR-L-elsbetiae_contig2101:19988..20023Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2101 19989..20023 +
1691683153.4107356-UTR-L-elsbetiae_contig2101:19988..200231691683153.4107356-UTR-L-elsbetiae_contig2101:19988..20023Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2101 19989..20023 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815862.5322883-CDS-L-elsbetiae_contig2101:17349..174241622815862.5322883-CDS-L-elsbetiae_contig2101:17349..17424Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2101 17350..17424 +
1691683153.329668-CDS-L-elsbetiae_contig2101:17349..174241691683153.329668-CDS-L-elsbetiae_contig2101:17349..17424Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2101 17350..17424 +
1622815862.5487304-CDS-L-elsbetiae_contig2101:18171..182371622815862.5487304-CDS-L-elsbetiae_contig2101:18171..18237Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2101 18172..18237 +
1691683153.3432357-CDS-L-elsbetiae_contig2101:18171..182371691683153.3432357-CDS-L-elsbetiae_contig2101:18171..18237Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2101 18172..18237 +
1622815862.5628936-CDS-L-elsbetiae_contig2101:18471..185551622815862.5628936-CDS-L-elsbetiae_contig2101:18471..18555Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2101 18472..18555 +
1691683153.3559046-CDS-L-elsbetiae_contig2101:18471..185551691683153.3559046-CDS-L-elsbetiae_contig2101:18471..18555Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2101 18472..18555 +
1622815862.575975-CDS-L-elsbetiae_contig2101:18970..191211622815862.575975-CDS-L-elsbetiae_contig2101:18970..19121Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2101 18971..19121 +
1691683153.369275-CDS-L-elsbetiae_contig2101:18970..191211691683153.369275-CDS-L-elsbetiae_contig2101:18970..19121Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2101 18971..19121 +
1622815862.5885468-CDS-L-elsbetiae_contig2101:19288..193781622815862.5885468-CDS-L-elsbetiae_contig2101:19288..19378Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2101 19289..19378 +
1691683153.3830888-CDS-L-elsbetiae_contig2101:19288..193781691683153.3830888-CDS-L-elsbetiae_contig2101:19288..19378Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2101 19289..19378 +
1622815862.6017056-CDS-L-elsbetiae_contig2101:19791..199881622815862.6017056-CDS-L-elsbetiae_contig2101:19791..19988Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2101 19792..19988 +
1691683153.3993976-CDS-L-elsbetiae_contig2101:19791..199881691683153.3993976-CDS-L-elsbetiae_contig2101:19791..19988Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2101 19792..19988 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2101.6370.1

>prot_L-elsbetiae_contig2101.6370.1 ID=prot_L-elsbetiae_contig2101.6370.1|Name=mRNA_L-elsbetiae_contig2101.6370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=221bp
MVKYTALFALASALYASCADAKEFKVRVRNLTYQQPFSPPLIVAHTNDVA
LFKEGFPASDAIKLMAEDGNNSGLLELAESADVAPYICGAVAADGPVFPG
ETWRGTIEVDETACPNPQYSVVTMLIHTNDAFLGIDSDGLNMNGAVKAFP
PAFDAGTEANNELCSHIPGPACGMESGNMQDGPGEGFIHIHRGFHGVGGE
LSEAGYDWRNPVAEVFIAAQ*
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mRNA from alignment at L-elsbetiae_contig2101:17302..20023+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2101.6370.1 ID=mRNA_L-elsbetiae_contig2101.6370.1|Name=mRNA_L-elsbetiae_contig2101.6370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2722bp|location=Sequence derived from alignment at L-elsbetiae_contig2101:17302..20023+ (Laminarionema elsbetiae ELsaHSoW15)
CCCTCCTTTCTTCTCTCTTCAGCTCCCCCCTCCACAAGCCGCTACAAGAT GGTCAAATACACGGCTCTGTTCGCTCTCGCTTCGGCGCTTTACGCCTCCT GCGCTGACGCCAAAGAATTCAAGGTGAGAGGCAGAGAGCGTCTCCGCCTC TGATGAGACGCAAGTTCGCCATCAACGGCTCATCTTGGCTCGTCTTTACG CGGATGACCAAATGGCGCACCTCGATTGAATGCATAGCCGGAGAGAAGTA ACCGTCGTACAGTCGCTGCTTGTTTTCTCTTGAGGTGATACTTCGAAGTA CGTACACACATACGTCGAGGTAAGTCTATCTATGTATGTAGATTTGCATG ATATGGCGAGGCTTCGAGTACAAGACATCAGTGGCATACGTAGACATGAG ATCTAGCGAGGACACCTTATGTCATATGTTCACTAGGCATCTGTACACCC TGTGGGTAGTGCTAGAAAAGTAGATACCATGTGAACACATCTATCTGTCC ACTAACGGGAAAGTGCCCAGCACCCGGAGGCAACCACAGGGGTTTAGTAG AAAATAATCATTATCGTTGGAGATTTGGAGAGCGTGGCCAAGCAAGTCTC CTATGTCGTCGGGGTCAAGCTCTCTTGGTCGCGCGTGATACTTTCTCCCC ACATCTCGGGAGAAGCGTTCTCTGCGTGCTCGTTCGGTACTCTCGTCCCA ATCCCTCATCTTGCGTGCATTCGCTTTAGATATATAGTTAAAGCTCGTTG CCTCTTGTCCAGGTAAAATCATTCACCGGTCTCTTTTCGACTTCCAACCC GGGTCCTTGACCTCTGTGCGTCTTCTCTGTGGTCCGCCTCTACTGCTTAT GTTCTGTGTTCCGTTTGCAGGTGCGGGTGCGAAACCTGACCTACCAGCAG CCCTTCTCGCCCCCGCTCATCGTGGCCCACACGAATGTGAGTTGTTTGTT TGTCGCGTGCCACTGCGGCTGCTGGTGACTCTACAGCTGCTGCTTTCCTG TGTTGACCGCCATGCGAACGTCACAGCCGTTCGCCAAAATCATTGGCTCG GACAAAGAAGTATACGTGGTTCCACTATCTCTGTGTTTTATATCTTTCCG GACAAACCCAGCTGATGGATTCGTGTTTCTCCACTTCCACACTCCTGACT CGATGTCTCTCTGTACCCAGGACGTGGCTCTGTTCAAAGAGGGGTTCCCT GCCAGCGACGCCATCAAGCTTATGGCCGAGGATGGAAACAACTCGGGGCT CTTGGTGAGTTCTTACAAAGTAGTCGAAAGTAATATGTGTCTGCGCCCTT CTTCGTTGATTTACGCCAACTCCCCTAGATGTTGGCTGGCCGGCACAGAG CGATGCGATAGTTAGGGCATTGTACTAGTCTAGGGGTGTTGATAGTAAGC ATCCTTCGAGCTCTTTCGACTCGCAGCGCAGGAACGTGCACGGTAGCAGT GCATGCCATTTTGGAGAATTTGTGTCGCGGATGTGTTATGGCACATCTTA GACCACCGCCTGGAACTCTTCAACTCCGTCCCGACACGCCTCTGCTTGTG CTTCGTCCGATACAGCATCTTTCGGGTATTTGCTAGTCTAGCCCCCCATC CGTTATTGCTTGACTGTCTCGTTGATATATGATGTTGCTCACGTTTGTTT CGGTTGTCTTGTCCTTCAGGAACTCGCAGAGAGCGCCGACGTGGCCCCGT ACATCTGCGGCGCCGTTGCAGCCGACGGCCCGGTCTTCCCCGGAGAGACA TGGAGAGGCACAATAGAAGTCGACGAGACCGCCTGTCCCAACCCCCAGTA CTCCGTCGTGACCATGCTCAGTGAGTGTATCTCTGGGTCCGAACTGAAAT GACACCCCACTGGAGTACCAGTTACTCCCGTATTGCAGTGTTAATTGTGC AGCTTATCATGTCGCCGTACACGCTAACCTCTCTTGCCACTGCTGTCGTT GCTTCCCTCCTCCACACCCGGAAACGCAACGCTGCAGTCCACACCAACGA TGCTTTCTTGGGCATCGACTCGGACGGCCTCAACATGAACGGAGCCGTCA AGGCCTTCCCCCCAGCATTCGACGCAGGTGAGGAAATAGCGAAGATAAAG CACCCGCGTCAGCTTCCTCCTCCGAGTGTTCGTATGCACACATATATGAA AGAGACGTTTTGAAGTGCATCCGTTGAAGAATGTGGCGATGTCAAGCGAG GGAGAGGTTGCCGCGCGAATCTGTTAGTGTGTAGATCGAGAGCTGTATAG CGGATTATTGATTGTTGATTTCTGCTCTTGCAGTCAAATTATGGGAAATG TATACGGTACTGAGGATGGTGGTAAGACCACTCTGTACATACACATGTGA ACTGGTGAATAGCGTTTCAGCAAGCTTCATTGCTTTATCACAGCCCTGAC GAATCAACCGCATTCAGGGGCAATACAGACCTTCTAACCTCTCCCTCTTT CCTTCCGTTGCGCGTTCTGCTCTCTACTCGGACTCGGCAGGTACCGAGGC CAACAACGAGCTTTGCTCCCACATCCCTGGCCCGGCCTGTGGTATGGAGA GCGGCAACATGCAGGATGGCCCCGGTGAGGGCTTCATCCACATCCACCGC GGTTTCCACGGCGTTGGCGGCGAGTTGTCCGAGGCCGGCTACGACTGGCG CAACCCGGTCGCCGAGGTCTTCATCGCCGCCCAGTAGACAGAGATGAAGA CGACGCATGAATTTGAGCGTCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig2101:17302..20023+

>mRNA_L-elsbetiae_contig2101.6370.1 ID=mRNA_L-elsbetiae_contig2101.6370.1|Name=mRNA_L-elsbetiae_contig2101.6370.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1326bp|location=Sequence derived from alignment at L-elsbetiae_contig2101:17302..20023+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTCAAATACACGGCTCTGTTCGCTCTCGCTTCGGCGCTTTACGCCTC
CTGCGCTGACGCCAAAGAATTCAAGATGGTCAAATACACGGCTCTGTTCG
CTCTCGCTTCGGCGCTTTACGCCTCCTGCGCTGACGCCAAAGAATTCAAG
GTGCGGGTGCGAAACCTGACCTACCAGCAGCCCTTCTCGCCCCCGCTCAT
CGTGGCCCACACGAATGTGCGGGTGCGAAACCTGACCTACCAGCAGCCCT
TCTCGCCCCCGCTCATCGTGGCCCACACGAATGACGTGGCTCTGTTCAAA
GAGGGGTTCCCTGCCAGCGACGCCATCAAGCTTATGGCCGAGGATGGAAA
CAACTCGGGGCTCTTGGACGTGGCTCTGTTCAAAGAGGGGTTCCCTGCCA
GCGACGCCATCAAGCTTATGGCCGAGGATGGAAACAACTCGGGGCTCTTG
GAACTCGCAGAGAGCGCCGACGTGGCCCCGTACATCTGCGGCGCCGTTGC
AGCCGACGGCCCGGTCTTCCCCGGAGAGACATGGAGAGGCACAATAGAAG
TCGACGAGACCGCCTGTCCCAACCCCCAGTACTCCGTCGTGACCATGCTC
AGAACTCGCAGAGAGCGCCGACGTGGCCCCGTACATCTGCGGCGCCGTTG
CAGCCGACGGCCCGGTCTTCCCCGGAGAGACATGGAGAGGCACAATAGAA
GTCGACGAGACCGCCTGTCCCAACCCCCAGTACTCCGTCGTGACCATGCT
CATCCACACCAACGATGCTTTCTTGGGCATCGACTCGGACGGCCTCAACA
TGAACGGAGCCGTCAAGGCCTTCCCCCCAGCATTCGACGCAGTCCACACC
AACGATGCTTTCTTGGGCATCGACTCGGACGGCCTCAACATGAACGGAGC
CGTCAAGGCCTTCCCCCCAGCATTCGACGCAGGTACCGAGGCCAACAACG
AGCTTTGCTCCCACATCCCTGGCCCGGCCTGTGGTATGGAGAGCGGCAAC
ATGCAGGATGGCCCCGGTGAGGGCTTCATCCACATCCACCGCGGTTTCCA
CGGCGTTGGCGGCGAGTTGTCCGAGGCCGGCTACGACTGGCGCAACCCGG
TCGCCGAGGTCTTCATCGCCGCCCAGTAGGTACCGAGGCCAACAACGAGC
TTTGCTCCCACATCCCTGGCCCGGCCTGTGGTATGGAGAGCGGCAACATG
CAGGATGGCCCCGGTGAGGGCTTCATCCACATCCACCGCGGTTTCCACGG
CGTTGGCGGCGAGTTGTCCGAGGCCGGCTACGACTGGCGCAACCCGGTCG
CCGAGGTCTTCATCGCCGCCCAGTAG
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