mRNA_L-elsbetiae_contig2101.6369.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2101.6369.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI) HSP 1 Score: 318 bits (816), Expect = 2.860e-108 Identity = 151/194 (77.84%), Postives = 169/194 (87.11%), Query Frame = 1 Query: 55 QVRVRNLTYEQPFSPPLIVAHTNKVSLFREGFPASDAIKLMAEDGNNSGFLELAASYDVAPYICGAVEADGPVFPGETWRGTLNVDEKICPNAQYSVVTMLIHTNDAFVGIDSDNLDMGGAVKAFPPAFDSGTETNNELCSHIPGPACGMKSGNMQDRPGEGFIHIHRGFHGVG-DLSEANYDWRNPVAEVFIA 633 +VRVRNLTY QPFSP L+VAHTN V+LF+EG PASDAIKLMAEDG+NS LELAAS DVAPYICGAV +GPVFPGETWRGTL +DE CP+ YSVV+MLI+TNDAFVGIDSD+L++ G+ K FPPAFD+GTE NNELC+HIPGPAC SGNM+D PGE FIH+HRGFHGVG DL EANYDWRNPVAEVFIA Sbjct: 23 KVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICGAVAGEGPVFPGETWRGTLTIDESACPDPVYSVVSMLINTNDAFVGIDSDDLNVYGSSKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDVPGEEFIHVHRGFHGVGPDLGEANYDWRNPVAEVFIA 216
BLAST of mRNA_L-elsbetiae_contig2101.6369.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI) HSP 1 Score: 309 bits (791), Expect = 2.180e-104 Identity = 149/210 (70.95%), Postives = 171/210 (81.43%), Query Frame = 1 Query: 1 STSSLWSVGGPFCATCGLQVRVRNLTYEQPFSPPLIVAHTNKVSLFREGFPASDAIKLMAEDGNNSGFLELAASYDVAPYICGAVEADGPVFPGETWRGTLNVDEKICPNAQYSVVTMLIHTNDAFVGIDSDNLDMGGAVKAFPPAFDSGTETNNELCSHIPGPACGMKSGNMQDRPGEGFIHIHRGFHGVGDLSEANYDWRNPVAEVFI 630 S SL + G T +VRVRNLTY QPFSPPLIVAHT V+LF+EGFPA+DAIKLMAEDG+NS LEL+ S DVAPYICG V A+GPVFPGETWRG L+VD ICPN YSVVTMLI+TNDAFVGIDSD L++G + KAFPPAFD+GTE N+E CS+IPGP C SGN Q+ PGEG+IH+HRG HGVGDL EA+YDWRNPVAE++I Sbjct: 12 SLVSLANASGKDYNTVPFKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGVVVAEGPVFPGETWRGQLDVDPYICPNPVYSVVTMLINTNDAFVGIDSDTLELG-STKAFPPAFDAGTEVNDERCSNIPGPGCPAGSGNNQNGPGEGYIHVHRGVHGVGDLEEASYDWRNPVAEIYI 220
BLAST of mRNA_L-elsbetiae_contig2101.6369.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI) HSP 1 Score: 298 bits (762), Expect = 2.830e-100 Identity = 141/193 (73.06%), Postives = 160/193 (82.90%), Query Frame = 1 Query: 58 VRVRNLTYEQPFSPPLIVAHTNKVSLFREGFPASDAIKLMAEDGNNSGFLELAASYDVAPYICGAVEADGPVFPGETWRGTLNVDEKICPNAQYSVVTMLIHTNDAFVGIDSDNLDMGGAVKAFPPAFDSGTETNNELCSHIPGPACGMKSGNMQDRPGEGFIHIHRGFHGVG-DLSEANYDWRNPVAEVFIA 633 VRVRNLTY QPFSP +VAHTN VS+FREGFPASDA+K+MAEDG+NS +EL AS DV PYICG V + P+FPG+TWRG + VDE ICP+AQYSVV+MLI+TNDAFVGIDS+ L G K FPPAFD+GTE NNELC+HIPGPAC SGNM+D PGEGFI + RGFHGVG DL EANYDWRNPVAEV +A Sbjct: 9 VRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICGGVMGEAPLFPGDTWRGVMTVDESICPDAQYSVVSMLINTNDAFVGIDSNRL--VGTEKVFPPAFDAGTEANNELCTHIPGPACPADSGNMEDGPGEGFISVSRGFHGVGPDLGEANYDWRNPVAEVVVA 199
BLAST of mRNA_L-elsbetiae_contig2101.6369.1 vs. uniprot
Match: D7G413_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G413_ECTSI) HSP 1 Score: 189 bits (481), Expect = 1.330e-57 Identity = 99/196 (50.51%), Postives = 125/196 (63.78%), Query Frame = 1 Query: 55 QVRVRNLTYEQPFSPPLIVAHTNKVSLFREGFPASDAIKLMAEDGNNSGFLELAASYDVAPYICGAVEADGPVFPGETWRGTLNVDEKICPNAQYSVVTMLIHTNDAFVGIDSDNLDMGGAVKAFPPAFDSGTETNNELCSHIPGPACGMKSG---NMQDRPGEGFIHIHRGFHGVGDLSEANYDWRNPVAEVFIA 633 +VRV NLT++Q FSPP+IVAH LF +G A AIK MAE+G N F+E+ A+ + CG A+GP+ PG+TW G + D C YSVV L +TNDAF+GID K FPPAFD+GTE NNE C+ I G AC N+ R EGFIH+HRG +GVGDLS+A+YDW+NPVAEV ++ Sbjct: 5 KVRVTNLTFKQDFSPPIIVAHEKGSPLFSKGRKARGAIKRMAEEGVNR-FIEIIATREDG--FCGFAAAEGPLLPGKTWNGEITFDANKCKRPVYSVVAKLTNTNDAFMGIDGSKFLDKRPSKLFPPAFDAGTEKNNEKCTCIRGRACPASPKPRENLGGRGSEGFIHVHRGINGVGDLSQADYDWKNPVAEVVVS 197
BLAST of mRNA_L-elsbetiae_contig2101.6369.1 vs. uniprot
Match: D7G3Z4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z4_ECTSI) HSP 1 Score: 191 bits (485), Expect = 2.560e-57 Identity = 99/195 (50.77%), Postives = 121/195 (62.05%), Query Frame = 1 Query: 55 QVRVRNLTYEQPFSPPLIVAHTNKVSLFREGFPASDAIKLMAEDGNNSGFLELAASYDVAPYICGAVEADGPVFPGETWRGTLNVDEKICPNAQYSVVTMLIHTNDAFVGIDSDNLDMGGAVKAFPPAFDSGTETNNELCSHIPGPAC--GMKSGNMQDRPGEGFIHIHRGFHGVGDLSEANYDWRNPVAEVFIA 633 +VRV NLT++Q FSPP+IVAH LF G A AIKLMAEDGNN + +A CG A+GP+ PG+TW G + D C YSVV L +TNDAF+GID K FPPAFD+GTE NNE C+ +PG AC KS EGFIH+HRG +GVGDLS+A+Y W+NPVAEV ++ Sbjct: 76 KVRVTNLTFKQDFSPPIIVAHEKGSHLFPVGGKARPAIKLMAEDGNNRNIMAIATREGG---FCGFAAAEGPLLPGKTWNGEITFDTDKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKHPSKLFPPAFDAGTEKNNEKCTCMPGRACPASPKSRENHGLGSEGFIHVHRGINGVGDLSKADYGWKNPVAEVVVS 267
BLAST of mRNA_L-elsbetiae_contig2101.6369.1 vs. uniprot
Match: D7G405_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G405_ECTSI) HSP 1 Score: 180 bits (456), Expect = 1.140e-53 Identity = 97/196 (49.49%), Postives = 122/196 (62.24%), Query Frame = 1 Query: 55 QVRVRNLTYEQPFSPPLIVAHTN-KVSLFREGFPASDAIKLMAEDGNNSGFLELAASYDVAPYICGAVEADGPVFPGETWRGTLNVDEKICPNAQYSVVTMLIHTNDAFVGIDSDNLDMGGAVKAFPPAFDSGTETNNELCSHIPGPAC--GMKSGNMQDRPGEGFIHIHRGFHGVGDLSEANYDWRNPVAEVFIA 633 +VRV NLT++Q FSPP+IVAH LF G A AIK MAE+G N G +++ A+ + CG A+GP+ PG+TW G + D C YSVV L +TNDAF+GID K FPPAFD+GTE NNE C+ +PG AC K+ R EGFIH+HRG GVGDLS+A+Y W NPVAEV ++ Sbjct: 19 KVRVTNLTFKQDFSPPIIVAHEKGSRPLFSMGGKARPAIKRMAEEGVN-GMVKVIATRESG--FCGFAVAEGPLLPGKTWNGEITFDTNKCKEPVYSVVAKLTNTNDAFMGIDGSKFLDKCPSKRFPPAFDAGTEKNNEKCTCMPGRACPASPKTRENHGRGSEGFIHVHRGIDGVGDLSKADYGWNNPVAEVVVS 211
BLAST of mRNA_L-elsbetiae_contig2101.6369.1 vs. uniprot
Match: D7G3Z6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z6_ECTSI) HSP 1 Score: 162 bits (411), Expect = 1.100e-46 Identity = 93/200 (46.50%), Postives = 127/200 (63.50%), Query Frame = 1 Query: 55 QVRVRNLTYEQPFSPPLIVAHTN-KVSLFREGFPASDAIKLMAEDGNNSGFLELAASYDVAPYICG--AVEADGPVFPGETWRGTLNVDEKICPNAQYSVVTMLIHTNDAFVGIDSDNLDMGGAV-KAFPPAFDSGTETNNELCSHIPGPACGMKSGNMQDRPG---EGFIHIHRGFHGVGDLSEANYDWRNPVAEVFIA 633 +VRV NLT++Q FS +IVAH LF EG A +AI ++AE+G SG ++ A+ + CG A E+ G +FPG+TW G + D C + YSVV L +TNDAF+GI G K FPPAFD+G+ETNNE C+ +PG AC + + ++R G EGFIH+HRGF G+GDLS+ +Y W+NPVA V ++ Sbjct: 31 KVRVTNLTFKQDFSAAIIVAHEKGSRPLFSEGAKARNAISMLAEEGL-SGNVQNIATRERG--FCGFAAPESKGLIFPGKTWEGKIQFDANKCKDPVYSVVAKLDNTNDAFMGIAGSKFPAGSCPSKHFPPAFDAGSETNNEKCTCMPGRACPKGTRDARERHGRNSEGFIHVHRGFQGIGDLSK-DYGWQNPVAVVVVS 226
BLAST of mRNA_L-elsbetiae_contig2101.6369.1 vs. uniprot
Match: A0A0S8ARA7_9BACT (Spondin domain-containing protein n=1 Tax=Nitrospira bacterium SG8_35_4 TaxID=1704025 RepID=A0A0S8ARA7_9BACT) HSP 1 Score: 145 bits (367), Expect = 4.190e-40 Identity = 78/193 (40.41%), Postives = 114/193 (59.07%), Query Frame = 1 Query: 55 QVRVRNLTYEQPFSPPLIVAHTNKVSLFREGFPASDAIKLMAEDGNNSGFLELAASYDVAPYICGAVEADGPVFPGETWRGTLNVDEKICPNAQYSVVTMLIHTNDAFVGIDSDNLDMGG-AVKAFPPAFDSGTETNNELCSHIPGPACGMKSGNMQDRPGEGFIHIHRGFHGVGDLSEANYDWRNPVAEVFI 630 ++ V N+T Q F+P L++ H VSLF G PAS A+ +AE G+ E+ + + P + V +DG +FPGET + E+ S+ M+I TND F+ ++ GG AV PA+D+G+E N+ELC +IPGP CG ++ + +D GEG++ IH G HG+G L E+ YDWRNPVA + I Sbjct: 32 ELTVTNMTKGQTFTPILVLTHRRGVSLFTPGSPASMALAALAEAGDTGPLTEMMS---MNPGVRDIVTSDGLLFPGETKTIMIPQSERY---RYISIAAMIIPTNDGFIALNGVQAPAGGNAVMYLSPAYDAGSEMNDELCDNIPGPVCGGEAISEED--GEGYVRIHEGIHGIGSLDESIYDWRNPVARIVI 216
BLAST of mRNA_L-elsbetiae_contig2101.6369.1 vs. uniprot
Match: A0A8J6Y6R9_9BACT (Spondin domain-containing protein n=1 Tax=Candidatus Sulfomarinibacter kjeldsenii TaxID=2885994 RepID=A0A8J6Y6R9_9BACT) HSP 1 Score: 139 bits (349), Expect = 1.590e-37 Identity = 85/214 (39.72%), Postives = 120/214 (56.07%), Query Frame = 1 Query: 22 VGGPFCATCGLQVRVRNLTYEQPFSPPLIVAHTNKVSLFREGFPASDAIKLMAEDGNNSGFLELAASYDVAPYICGAVEADGPVFPGETW------RGTLNVDEKICPNAQYSVVTMLIHTNDAFVGIDSDNLDMGGA-VKAFPPAFDSGTETNNELCSHIPGPACGMKSGNMQDRPG-EGFIHIHRGFHGVGDLSEANYDWRNPVAEVFIAAK 639 + P A ++VR+ N++ +Q SPP+I +H+ K+ +F G PAS + ++AEDGN L LA D + + ADGP+ PG T RG N + S V ML+ TND F G+++ +D + PA+D+GTE NNELC IPGP CG S ++D G EGFIH H G HG GDLS +++ W+NPV ++ I K Sbjct: 17 LSAPAMAQDMIKVRITNVS-KQIISPPVIASHSAKIRVFVPGSPASTELSMLAEDGNP---LALATLLDGSDEVLDVKVADGPLLPGATMVFELESRGRFN---------RVSAVGMLVTTNDGFFGLENFLVDRSSRNERVSVPAWDAGTEFNNELCGFIPGPPCG--SPLVRDTDGAEGFIHTHPGLHGGGDLSPSDWSWQNPVVDIRIMKK 215
BLAST of mRNA_L-elsbetiae_contig2101.6369.1 vs. uniprot
Match: A0A433PQD1_9FUNG (Spondin domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQD1_9FUNG) HSP 1 Score: 137 bits (346), Expect = 6.230e-37 Identity = 84/200 (42.00%), Postives = 112/200 (56.00%), Query Frame = 1 Query: 58 VRVRNLTYEQPFSPPLIVAHTNKVSLFREGFPASDAIKLMAEDGNNSGFLELAASYDVAPYICGAVEADGPVFPGETWRGTLNVDEKICPNAQYSVVTMLIHTNDAFVGIDSDNLDMGGAVKAFP-PAFDSGTETNNELCSHIPGPACGMKSGNMQDRPG--EGFIHIHRGFHGVGDLS---EANYDWRNPVAEVFIAAK 639 + V+NL Y QPFSP L V H + LF+ G PAS A++ +AE G+ S F+ L D ICG A G P T++GT+ + K C N S+V ML TNDAF GI++ L G K F PA+D+GTE NNE C ++ G D PG EGF+H+HRG HG+ +YDWRNPVA + ++ + Sbjct: 30 ITVQNLAYLQPFSPVLAVIHEPSIYLFQLGTPASAALRAVAEGGDPSKFVALFQ--DGLEGICGWSVAPGKTLPSTTYKGTVTIS-KPCTNPHISIVNMLGITNDAFTGINTIPL-YGELSKRFEVPAYDAGTEENNEDCQYV----FGCPGSPNLDTPGLGEGFVHVHRGVHGLNVSKPGLSVDYDWRNPVAYITVSVQ 221 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2101.6369.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2101.6369.1 >prot_L-elsbetiae_contig2101.6369.1 ID=prot_L-elsbetiae_contig2101.6369.1|Name=mRNA_L-elsbetiae_contig2101.6369.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=214bp STSSLWSVGGPFCATCGLQVRVRNLTYEQPFSPPLIVAHTNKVSLFREGFback to top mRNA from alignment at L-elsbetiae_contig2101:10158..11948+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2101.6369.1 ID=mRNA_L-elsbetiae_contig2101.6369.1|Name=mRNA_L-elsbetiae_contig2101.6369.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1791bp|location=Sequence derived from alignment at L-elsbetiae_contig2101:10158..11948+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2101:10158..11948+ >mRNA_L-elsbetiae_contig2101.6369.1 ID=mRNA_L-elsbetiae_contig2101.6369.1|Name=mRNA_L-elsbetiae_contig2101.6369.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1284bp|location=Sequence derived from alignment at L-elsbetiae_contig2101:10158..11948+ (Laminarionema elsbetiae ELsaHSoW15)back to top |