prot_L-elsbetiae_contig209.6322.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig209.6322.1
Unique Nameprot_L-elsbetiae_contig209.6322.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length240
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig209.6322.1 vs. uniprot
Match: A0A6H5JDI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDI9_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.340e-18
Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = 0 
Query:   51 EELDPLPELPETGDDRFFTKDALDFQYTTVPAENNPLFPTWGSTGAEMAAIGAA 104
            EELDPLPELPE+ D+RFFTK+AL+FQY T PAEN PLFPTWGSTGAEMAAIGAA
Sbjct:    7 EELDPLPELPESADERFFTKEALEFQYPTGPAEN-PLFPTWGSTGAEMAAIGAA 59
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig209.6322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JDI9_9PHAE1.340e-1885.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig209contigL-elsbetiae_contig209:8533..12478 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig209.6322.1mRNA_L-elsbetiae_contig209.6322.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig209 8533..12478 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig209.6322.1 ID=prot_L-elsbetiae_contig209.6322.1|Name=mRNA_L-elsbetiae_contig209.6322.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=240bp
GNRRDSTRVISHRDLAYCTQQLDTPGAERGRCVAFALTMEDSRDNYADIL
EELDPLPELPETGDDRFFTKDALDFQYTTVPAENNPLFPTWGSTGAEMAA
IGAAAAANAMTPAAAVAGTSPSPSPSLSPSPSPPSAVGSATVVAAGSPSK
STLRAARSGGGAGSKKRALPNVPPEPMLPNQGRSSRGRGVVPTAATVVAA
VPSTSCTTADRTVFLRERLGGESVSSGNSSTSAGSGSDNG
back to top