prot_L-elsbetiae_contig209.6324.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig209.6324.1
Unique Nameprot_L-elsbetiae_contig209.6324.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length186
Homology
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BLAST of mRNA_L-elsbetiae_contig209.6324.1 vs. uniprot
Match: A0A6H5JDI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDI9_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.570e-21
Identity = 110/221 (49.77%), Postives = 118/221 (53.39%), Query Frame = 0 
Query:    1 MACATPVRRFLELEYVDGTLRGGLVDHSRSSAARQVACLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGVETPATTSSGGDSGDLEPSRSDGEQQPPSV-----------------------VAPRPAQILPAHPDAARDLAAVCRCLGELGASAFTPAPYSSSSVPPAFRGAA-PYWS--------AVGDEAGSGA----GDGVVPQRGVALLA 185
            MA ATP RRFLELEY+DGTLRGG+ D SR++AARQVA LAA    XXXXXXXXXXXXX       XXXXXXX                                                        V PRPAQ LPAHPDAARDLAAVCRCLGELGASAFT     SSS  PA RGAA PYWS        A  D+  +GA    G+ V  Q GVAL+A
Sbjct:  493 MAWATPARRFLELEYLDGTLRGGVADDSRATAARQVASLAAFTTAXXXXXXXXXXXXXDVVESNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVPRPAQTLPAHPDAARDLAAVCRCLGELGASAFT-----SSS--PALRGAAAPYWSSPAKTATAAARDKGNTGAAASGGEDVATQPGVALVA 706
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig209.6324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JDI9_9PHAE1.570e-2149.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig209contigL-elsbetiae_contig209:13388..13945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig209.6324.1mRNA_L-elsbetiae_contig209.6324.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig209 13294..14235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig209.6324.1 ID=prot_L-elsbetiae_contig209.6324.1|Name=mRNA_L-elsbetiae_contig209.6324.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=186bp
MACATPVRRFLELEYVDGTLRGGLVDHSRSSAARQVACLAALTTAAAAAA
SAAQGAFAAGDEDGKGAAAAAAVPGVETPATTSSGGDSGDLEPSRSDGEQ
QPPSVVAPRPAQILPAHPDAARDLAAVCRCLGELGASAFTPAPYSSSSVP
PAFRGAAPYWSAVGDEAGSGAGDGVVPQRGVALLA*
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