prot_L-elsbetiae_contig2089.6316.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2089.6316.1
Unique Nameprot_L-elsbetiae_contig2089.6316.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length651
Homology
BLAST of mRNA_L-elsbetiae_contig2089.6316.1 vs. uniprot
Match: A0A6H5K8Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z3_9PHAE)

HSP 1 Score: 526 bits (1356), Expect = 6.470e-177
Identity = 392/609 (64.37%), Postives = 430/609 (70.61%), Query Frame = 0
Query:   52 VLAWGSWDQKRS---QDQVTPRLSGNAKALSDE-TRVAAARYQQPVLDSSWTHAAFRAFHEMRAGCPPSSAVDGDREVQDEAGGGGGKGPLAGVRRLSSNLPRLQGARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPKARSAPPACWHMQGRLTDAATGQTIALVEGVEMARSISFETASPRKSAGGKRRERFGGDRGPAGGXXXXXXXXXXXXXXXXX--VDKELKPGRWTAFGALASSKFFMYQDPATGEPMEHFRNTPVEKKQPVRTYERFSQVVSHLLQPNGRLLVVSEWGGRSVKAETANNNGVEEVXXXXXXXXXXXXXXXXXXXXQFGNGKSGRSLSVSSPSSSPRRVFNLHFFVEARTPKEERELKRWQDRPGARWIAFGSPPPPAHGCKEVYSYVTGRGGGRRDGSEADAGGEEALGKIKLPWLTKRERK----NEADGGVAAGXXXXXXXXXXXXXXXXXXXXXXXXXLMSYTRYGECPTWYGTGRMCGLDVQAKRVGSFASLPARLKQKVLEMDPDFEAGPPGTMAEVRRAAKKQRLEREEESRRKGRRSLRRPFGSWGSASSSGGDL 650
            VLAW  WD++RS   +D+ T  L   A   +DE T VA A   Q VLDSSWT AAFRAFHEMRAG                                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           P K   + PACWHM+GRLT+ ATGQTIALVEGVE+ARS++FETAS RKS+ G +R        PAGGXXXXXXXXXXXXXXX    VDK LKPGRWTAFGALA+SKFFMYQDPATGEPM+HFRNTPVEKKQ VRTYERFSQVVSHLLQPNGR+LVVSEWGGRSVKAETANNNGVEE+                    +       RSL+ SS SS PRRVFNLHFFVEARTPKEERELKRWQ+RPGARWIAFGSPPP AHGCKEVYSYVTGR    R+G       +E   K +LPW   R +      E D               XXXXXXXXXXXXXX  LMSYTRYGECPTWYGTGRMCGLDVQA+RV SFASLPA+L+++VL++DP+FEAGPPGTM EVRRAA++QRLEREEE RRKG+RSLRRPFG+WGS+SS  G+L
Sbjct:   72 VLAWAGWDRRRSSNSRDEAT--LKTTALRTADERTAVADAADSQRVLDSSWTQAAFRAFHEMRAGPXXXXXXXXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGDDAGPSTEPRKRPQSEPACWHMRGRLTNTATGQTIALVEGVELARSLAFETASSRKSSRGPKR--------PAGGXXXXXXXXXXXXXXXGELEVDKALKPGRWTAFGALATSKFFMYQDPATGEPMDHFRNTPVEKKQAVRTYERFSQVVSHLLQPNGRVLVVSEWGGRSVKAETANNNGVEEIEGGRGGWFPGGARDLGIVNDE-------RSLARSS-SSPPRRVFNLHFFVEARTPKEERELKRWQERPGARWIAFGSPPPRAHGCKEVYSYVTGR---EREGGRGGNERKEEGKKDRLPWAWNRNKAASDAREGDDDAEGVDDGTVALASXXXXXXXXXXXXXXGGLMSYTRYGECPTWYGTGRMCGLDVQARRVDSFASLPAKLREEVLKVDPEFEAGPPGTMGEVRRAAREQRLEREEERRRKGKRSLRRPFGTWGSSSSPDGEL 645          
BLAST of mRNA_L-elsbetiae_contig2089.6316.1 vs. uniprot
Match: D7FYF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF1_ECTSI)

HSP 1 Score: 484 bits (1245), Expect = 1.330e-163
Identity = 293/433 (67.67%), Postives = 322/433 (74.36%), Query Frame = 0
Query:  226 MQGRLTDAATGQTIALVEGVEMARSISFETASPRKSAGGKRRERFGGDRGPAGGXXXXXXXXXXXXXXXXXVDKELKPGRWTAFGALASSKFFMYQDPATGEPMEHFRNTPVEKKQPVRTYERFSQVVSHLLQPNGRLLVVSEWGGRSVKAETANNNGVEEVXXXXXXXXXXXXXXXXXXXXQFGNGKSGRSLSVSSPSSSPRRVFNLHFFVEARTPKEERELKRWQDRPGARWIAFGSPPPPAHGCKEVYSYVTGRGGGRRDGSEADAGG---EEALGK-IKLPWLTKRER-----KNEADGGVAAGXXXXXXXXXXXXXXXXXXXXXXXXXLMSYTRYGECPTWYGTGRMCGLDVQAKRVGSFASLPARLKQKVLEMDPDFEAGPPGTMAEVRRAAKKQRLEREEESRRKGRRSLRRPFGSWGSASSSGGD 649
            M+GRLT+ ATGQTIALVEGVE+ARS++FETAS RKS+   RR            XXXXXX           VDK LKPGRWTAFGALA+SKFFMYQDPATGEPM+HFRNTPVEKKQ VRTYERFSQVVSHLLQPNGR+LVVSEW GRSVKAETANNNGVEE+                      G+GK  RSLS  SPSS PRRVFNLHFFVEARTPKEERELKRWQ+RPGARWIAFGSPPP AHGCKEVYSYVT        GSE + GG   E   GK  +LPW   R +     +   D                XXXXXXXXXXXXXXXLMSYTRYGECPTWYGTGRMCGLDVQA+RV SF+SLPA+L++KVLE+DP+FE GPPGTM EVRRAA++QRLEREEE RRKGRRSLRRPFG+WGS+S+  G+
Sbjct:    1 MRGRLTNTATGQTIALVEGVELARSLAFETASSRKSS---RRPXXX----XXXXXXXXXXVAGAEGEGELEVDKALKPGRWTAFGALATSKFFMYQDPATGEPMDHFRNTPVEKKQAVRTYERFSQVVSHLLQPNGRVLVVSEWDGRSVKAETANNNGVEEIEGGRGGWFPGGAR-------DLGSGKDERSLS-RSPSSPPRRVFNLHFFVEARTPKEERELKRWQERPGARWIAFGSPPPRAHGCKEVYSYVT--------GSEREGGGGGNERKEGKKARLPWAWNRSKAASDAREGDDNAEVVDDGSVALASSSXXXXXXXXXXXXXXXLMSYTRYGECPTWYGTGRMCGLDVQARRVDSFSSLPAKLREKVLEVDPEFEVGPPGTMGEVRRAAREQRLEREEERRRKGRRSLRRPFGAWGSSSARDGE 410          
BLAST of mRNA_L-elsbetiae_contig2089.6316.1 vs. uniprot
Match: A0A835YPS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPS0_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.750e-13
Identity = 54/161 (33.54%), Postives = 70/161 (43.48%), Query Frame = 0
Query:  454 RPGARWIAFGSPPPPAHGCKEVYSYVTGRGGGRRDGSEADAGGEEALGKIKLPWLTKRERKNEADGGVAAGXXXXXXXXXXXXXXXXXXXXXXXXXLMSYTRYGECPTWYGTGRMCGLDVQAKRVGSFASLPARLKQKVLEMDPDFEAGPPGTMAEVRRAA 614
            R G +WI  G  PPP +GCKE Y+YV   GG  +DG E D G                                                      LM+Y RYGECP+WY  G+MC LD+QA+RV SF++LP  L+  V ++ P F    P T  E R+ +
Sbjct:  152 RRGNKWIGIGPSPPPEYGCKESYTYVAREGG--QDG-EPDTG------------------------------------------------------LMTYHRYGECPSWYAPGKMCSLDMQARRVESFSALPKPLQSAVRKLVPSF-CNVPHTAQEFRQTS 254          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2089.6316.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K8Z3_9PHAE6.470e-17764.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF1_ECTSI1.330e-16367.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YPS0_9STRA3.750e-1333.54Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 607..627
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..650
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.9
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2089contigL-elsbetiae_contig2089:13213..16487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2089.6316.1mRNA_L-elsbetiae_contig2089.6316.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2089 13198..16706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2089.6316.1 ID=prot_L-elsbetiae_contig2089.6316.1|Name=mRNA_L-elsbetiae_contig2089.6316.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=651bp
MAPHLFGAAVRLAMVAVVVLSAALPAVAAAPPTANRERQHSARAARPRGN
PVLAWGSWDQKRSQDQVTPRLSGNAKALSDETRVAAARYQQPVLDSSWTH
AAFRAFHEMRAGCPPSSAVDGDREVQDEAGGGGGKGPLAGVRRLSSNLPR
LQGARGGGAGGATTAASGGGGKKRTSRRRETSKEASAISSATAAAAVVAL
ERGGESGGGERAPPKARSAPPACWHMQGRLTDAATGQTIALVEGVEMARS
ISFETASPRKSAGGKRRERFGGDRGPAGGGGGGGEGEAEGEEEELEVDKE
LKPGRWTAFGALASSKFFMYQDPATGEPMEHFRNTPVEKKQPVRTYERFS
QVVSHLLQPNGRLLVVSEWGGRSVKAETANNNGVEEVEGGGGGFFSGGGG
GGGGGGGQFGNGKSGRSLSVSSPSSSPRRVFNLHFFVEARTPKEERELKR
WQDRPGARWIAFGSPPPPAHGCKEVYSYVTGRGGGRRDGSEADAGGEEAL
GKIKLPWLTKRERKNEADGGVAAGGSGDPALASASSSSSRRTGGGGGGGL
MSYTRYGECPTWYGTGRMCGLDVQAKRVGSFASLPARLKQKVLEMDPDFE
AGPPGTMAEVRRAAKKQRLEREEESRRKGRRSLRRPFGSWGSASSSGGDL
*
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