prot_L-elsbetiae_contig2086.6307.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2086.6307.1
Unique Nameprot_L-elsbetiae_contig2086.6307.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length299
Homology
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BLAST of mRNA_L-elsbetiae_contig2086.6307.1 vs. uniprot
Match: D7G984_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G984_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 3.620e-6
Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 0 
Query:    1 MVDVKNKRCTHCGCTKYPSYGKAG-GKAGYCRDHAQDGMLN 40
            MVD++NKRC H  CTKYPSYG+    KA YC  H   GM+N
Sbjct:    1 MVDIRNKRCRHPDCTKYPSYGQGSTNKAEYCSKHRHQGMVN 41
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2086.6307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G984_ECTSI3.620e-658.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2086contigL-elsbetiae_contig2086:10476..11372 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2086.6307.1mRNA_L-elsbetiae_contig2086.6307.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2086 10393..12476 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2086.6307.1 ID=prot_L-elsbetiae_contig2086.6307.1|Name=mRNA_L-elsbetiae_contig2086.6307.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=299bp
MVDVKNKRCTHCGCTKYPSYGKAGGKAGYCRDHAQDGMLNVKSKKICIHP
GCTKQPSYGKAGGRVEFCRDHAEDEMVNVKHKTCTDHGCTRKPSYGKADD
GKAQYCRDHAKDGMVDVSSKRCSHHGCNKHPSYGNAGGKAEYCRDHAEGR
MVNVKLKTCTHHGCTKGSSYGRAGGRAEFCRDHAEDGMVDVKHKVCADHG
CTKQPSYGKAGGKKEFCRDHAEEGMVSLAKKQGMLSLRKRRSVDATVDGK
QKRPRFVKEEAVEGRVRAAAATTTVAEVGATQPFMGLGKGRRERQNDK*
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