mRNA_L-elsbetiae_contig2083.6299.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2083.6299.1 vs. uniprot
Match: D8LLV1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLV1_ECTSI) HSP 1 Score: 316 bits (809), Expect = 2.280e-102 Identity = 182/224 (81.25%), Postives = 200/224 (89.29%), Query Frame = 2 Query: 29 GGAQGSKP--SRGRYVPPXXXXXXXXXXXXXXXXXGK-GRMKYVPPPTNAGEWNRPKKTAGNGPCQWKELAAKEDAQLRASKRIGRAEANQSNSVGMSGNDRADIAATKMEFDLWTKNDVARTHKWARAEECRIPNKRVAKGGRLHKFINILLNNCDHISEKLSSEKRYQDACRDPTMASGLELKRQFVAPLAKRVLNKVEEDEAQQAFKDDDPDSDDSEGRAM 691 G A KP ++GRYVP XXXXXXXXXXXXXXXXX G+MKYVPPPTNAG WNRPK T G GPCQWKELA KEDAQL+ASK++ RAEA Q+NSVGMSGND+ADIAATKMEFDLWTK DV +T WA+AEECRIPNKRVAKGGRLHKFINILLNNC+ ISE+L+SEKRYQDACRDPT+ SGL+LKRQFVAPLAKRVLNKVE++E +QAFKDDDPDSDDSEGRAM Sbjct: 16 GAAASGKPKSTKGRYVPXXXXXXXXXXXXXXXXXXXXXGKMKYVPPPTNAGAWNRPKAT-GQGPCQWKELADKEDAQLKASKKVMRAEAKQNNSVGMSGNDKADIAATKMEFDLWTKTDVTKTRNWAKAEECRIPNKRVAKGGRLHKFINILLNNCEFISERLASEKRYQDACRDPTLPSGLDLKRQFVAPLAKRVLNKVEDEENEQAFKDDDPDSDDSEGRAM 238 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2083.6299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2083.6299.1 >prot_L-elsbetiae_contig2083.6299.1 ID=prot_L-elsbetiae_contig2083.6299.1|Name=mRNA_L-elsbetiae_contig2083.6299.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp MKYVPPPTNAGEWNRPKKTAGNGPCQWKELAAKEDAQLRASKRIGRAEANback to top mRNA from alignment at L-elsbetiae_contig2083:10096..17197- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2083.6299.1 ID=mRNA_L-elsbetiae_contig2083.6299.1|Name=mRNA_L-elsbetiae_contig2083.6299.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7102bp|location=Sequence derived from alignment at L-elsbetiae_contig2083:10096..17197- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2083:10096..17197- >mRNA_L-elsbetiae_contig2083.6299.1 ID=mRNA_L-elsbetiae_contig2083.6299.1|Name=mRNA_L-elsbetiae_contig2083.6299.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1110bp|location=Sequence derived from alignment at L-elsbetiae_contig2083:10096..17197- (Laminarionema elsbetiae ELsaHSoW15)back to top |