prot_L-elsbetiae_contig2077.6271.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2077.6271.1
Unique Nameprot_L-elsbetiae_contig2077.6271.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length87
Homology
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BLAST of mRNA_L-elsbetiae_contig2077.6271.1 vs. uniprot
Match: D7FLL3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL3_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.390e-14
Identity = 40/91 (43.96%), Postives = 58/91 (63.74%), Query Frame = 0 
Query:    1 MREGAFAAITTLGILAVLSRCRACS----IWRRQSRGGKRVSFSDADNSVIE-ISLDLTDEERKALNWSPAELRQFSRAVAVEGWLEEWGS 86
            MR+G       + I A L+ C A +    ++  + R GKRVSFS  ++ + +     LT+EERK L++SPAEL+QFSR++ V+ WLEEWGS
Sbjct:    1 MRDG-------IAITAALTACTAIAFNFGVFFPRRRAGKRVSFSTREDMIHDGYGHHLTEEERKDLSYSPAELQQFSRSLDVDAWLEEWGS 84
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2077.6271.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLL3_ECTSI1.390e-1443.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..86
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2077contigL-elsbetiae_contig2077:3749..4009 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2077.6271.1mRNA_L-elsbetiae_contig2077.6271.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2077 3638..6286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2077.6271.1 ID=prot_L-elsbetiae_contig2077.6271.1|Name=mRNA_L-elsbetiae_contig2077.6271.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=87bp
MREGAFAAITTLGILAVLSRCRACSIWRRQSRGGKRVSFSDADNSVIEIS
LDLTDEERKALNWSPAELRQFSRAVAVEGWLEEWGS*
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