mRNA_L-elsbetiae_contig2077.6272.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2077.6272.1 vs. uniprot
Match: A0A6H5KR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR14_9PHAE) HSP 1 Score: 363 bits (931), Expect = 6.250e-113 Identity = 290/634 (45.74%), Postives = 335/634 (52.84%), Query Frame = 1 Query: 67 MFASLQLEQKELKKLWVEFGKIDTDNGGTVSIRELLWHCDLDFTPFAYRLFSIFDEDNSGAVDFREFVLSTWNCCTMDQNSLIRFAFDLFDGDHSHAIETTEMEAMLREVYGESFVDSHTAALTLQRVKELSSQSEPKEPTKGAPVPKTAKDGLELDADGRVYALSFEAFRQV*GFCRQHPGMLLPAFTLQRRIRSKIVSESFWK--------------------------------GCSDRRNGGRPGXXXXXXXXXXXXXRQALRLEDLSTMISSHEASGTGTAAGQGAPPQKTPGXXXXXXXXXXXXXXXXXXXXXXAEPPATASPSPAPG---SLKTPWEA--GGARGERTTDDANKPPLDGGSSPRAPATAGQQED-DGCKGGDPSAPGARKRGSELPGDGGENXXXXXXXXXXXXXXSAARGVVAVEEGDSGVEGGGGAGKEAGTGAAPPPEKVLRFSTPASSGGR--------SKLASHGDAAQPEVLPTTAGQTEPPR-----------QQPRPTYPLPVDAGGRGASAWARGGE--------GVPDAESHLPHFQGVEGDEAGAARRR------NRESKVDSPALVAARAAAVYELPALRETGAHKRSSHQARDLAAGSGVRGGR 1755 MFASL LEQKELKKLW+EFGKIDTDNGGTVSIRELL HCDLDFTPFAYRLF I EFV+STWNCCTM T EMEAMLREVYGE F DS AALTL+RVKELSS S+ PT + + AK G+++ DGR+YALSFEAFR+ FCRQH GMLLPAFTLQ+R+RSKIVSE+FWK C+DRRNG R +++++LE LSTM+S E S TGT P + XXXXXXXXXXX A+ P A PSP+P + P +A G+ G ++++ GSS + PATA + +D GC P G + G G G + S +RGVVAVE G EG GG + K RFS A G R S SHG A+QP L +PP QPR TYPLP+DAGGRG SAWARGG GVP P F G G+E A RR +ES+VDSP AARAAAVYELPALR+T A KR SHQARDL AGSG RGGR Sbjct: 1 MFASLDLEQKELKKLWIEFGKIDTDNGGTVSIRELLSHCDLDFTPFAYRLFGIXXXXXXXXXXXXEFVVSTWNCCTM----------------------TAEMEAMLREVYGERFADSPAAALTLKRVKELSSSSDAG-PTNETTILELAKKGVQVAPDGRIYALSFEAFRE---FCRQHAGMLLPAFTLQKRVRSKIVSEAFWKVKPLVNRSLSTYGSSVRCLIPPHLCPDFPFEKECADRRNGVRQ--DRNRGKRENRPPQKSIQLEHLSTMMSLDEKSATGTTTDNTPAPNGS----------ATXXXXXXXXXXXSAQTPKKALPSPSPALGDGIIAPPKARKSGSGGNDYCNNSS------GSSSKTPATAEKIDDAGGCN--TPDGSGEQMEGQARRGGDGGHEKGTGDGGAPRKRRSGSRGVVAVE----GDEGSGGGSEN----------KTPRFSMQAPQGSREGPNAHRVSGTPSHGGASQPATLRQGTPTNDPPTGTSATDNVAKTPQPRQTYPLPIDAGGRGTSAWARGGGEEPLLGWGGVP------PGFAGGVGEEESAPGRRPPDRRLKKESRVDSPLAAAARAAAVYELPALRDTAATKRRSHQARDLVAGSGGRGGR 568
BLAST of mRNA_L-elsbetiae_contig2077.6272.1 vs. uniprot
Match: D7FLL2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL2_ECTSI) HSP 1 Score: 340 bits (873), Expect = 4.320e-105 Identity = 269/621 (43.32%), Postives = 312/621 (50.24%), Query Frame = 1 Query: 67 MFASLQLEQKELKKLWVEFGKIDTDNGGTVSIRELLWHCDLDFTPFAYRLFSIFDEDNSGAVDFREFVLSTWNCCTMDQNSLIRFAFDLFDGDHSHAIETTEMEAMLREVYGESFVDSHTAALTLQRVKELSSQSEPKEPTKGAPVPKTAKDGLELDADGRVYALSFEAFRQV*GFCRQHPGMLLPAFTLQRRIRSKIVSESFWKGCSDRRNGGRPGXXXXXXXXXXXXXRQALRLEDLSTMISSHEASGTGTAAGQGAPPQKTPGXXXXXXXXXXXXXXXXXXXXXXAEPPATASPSPAPG---SLKTPWEAGGARGERTTDDANKPPLDGGSSPRAPATAGQQEDD-GCKGGDPSAPGARKRGSELPGDGGENXXXXXXXXXXXXXXSAARGVVAVEEGDSGVEGGGGAGKEAGTGAAPPPEKVLRFSTPASSGGRSKLASH---------GDAAQPEVLPTTAGQTEPPR-----------QQPRPTYPLPVDAGGRGASAWARGGEGVP--DAESHLPHFQGVEG-DEAGAARRRNRESKVDSPALVAARAAAVYELPALRETGAHKRSSHQARDLAAGSGVRGGRAHRSSARPMSA----SPDARTRRREAGQIAA 1836 MFASL LEQKELKKLW+EFGKIDTDNGGT + SL+RFAFDLFD DHS AIET EMEAMLREVYGE F DS AALTL+RVKELSS S+ PT + AK+G+++ DGR+YALSFEAFR+ FCRQH GML PAFTLQ+R+RSKIVSE+FWKGC+DRRNG RPG R+A++LE LSTM++ E S TGT P + A+ P A PS +K P EA +R + + PATAG+ +D GC P G ++ G G G + S +RGVVAVE GD G GG K RFS A R +H G A++P L A PP QPR TYPLPVDAGGRG SAWARGG P P G G +E+ RR+ +ES+VDSP AARAAAVYELPALRET A K+ SH ARDL AGS RGGR P SA SP+AR RRRE GQ AA Sbjct: 1 MFASLDLEQKELKKLWIEFGKIDTDNGGT------------------------------------------------NHESLVRFAFDLFDRDHSGAIETAEMEAMLREVYGEHFADSPAAALTLKRVKELSSSSDAG-PTNETTLLALAKNGVQVGPDGRIYALSFEAFRE---FCRQHAGMLFPAFTLQKRVRSKIVSEAFWKGCADRRNGVRPGRNKGKGGKRSS--RKAIQLEHLSTMMNLDEKSATGTTTDNTPAPNGS----------ATGTANTTAQGNGCAQTPTKALPSXXXXXGDEIKAPSEAR----KRGSGXXXXXXXXXXXXSKTPATAGKTDDAAGCD--TPDGAGEKEEGQARRGGDGGHEKGTGDGGTPRKRRSGSRGVVAVE-GDEGSWGGS-------------ENKTPRFSMQAPQASREGTTTHRVSGTPSHGGGASRPATLRQGAPTNGPPTGTSATDNAVKTPQPRQTYPLPVDAGGRGTSAWARGGGEEPMIGXXXXPPGLAGGVGIEESAPGRRQKKESRVDSPLAAAARAAAVYELPALRETAATKQRSHHARDLVAGSRERGGR-------PASAGGSHSPNARQRRRETGQAAA 530
BLAST of mRNA_L-elsbetiae_contig2077.6272.1 vs. uniprot
Match: A0A2R5GVS2_9STRA (Calcium-dependent protein kinase 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVS2_9STRA) HSP 1 Score: 152 bits (385), Expect = 7.080e-38 Identity = 83/211 (39.34%), Postives = 124/211 (58.77%), Query Frame = 1 Query: 67 MFASLQLEQKELKKLWVEFGKIDTDNGGTVSIRELLWHCDLDFTPFAYRLFSIFDEDNSGAVDFREFVLSTWNCCTMDQNSLIRFAFDLFDGDHSHAIETTEMEAMLREVYGESFVDSHTAALTLQRVKELSSQSEPKEPTKGAPVPKTAKDGLELDADGRVYALSFEAFRQV*GFCRQHPGMLLPAFTLQRRIRSKIVSESFWKGCSDRR 699 +F ++ L ++ ++KL+ F KID D G +S+ ELL H + TPF R+FSIFDED SG++DFREFVLSTWN T+ +++LI FAFDL+DGD S ++E E+ M ++VYG F S AA + ++ +L+ +PT+G+ + ++ E F FC HPG+L PAFT Q+ ++ I+ +FW S R Sbjct: 20 LFRTIGLNERHVEKLYRGFSKIDKDGSGELSLFELLDHLKVSKTPFTKRVFSIFDEDGSGSIDFREFVLSTWNYATLTKSTLIIFAFDLYDGDESGSMELEEIMDMCKDVYGADFEKSRLAAQIIDKIHKLN------DPTRGSGI------------------ITLEKFAV---FCEHHPGLLYPAFTFQQALQKAIIGVTFWTKLSKER 203
BLAST of mRNA_L-elsbetiae_contig2077.6272.1 vs. uniprot
Match: A0A482T6P1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T6P1_9ARCH) HSP 1 Score: 132 bits (332), Expect = 1.690e-31 Identity = 73/210 (34.76%), Postives = 112/210 (53.33%), Query Frame = 1 Query: 70 FASLQLEQKELKKLWVEFGKIDTDNGGTVSIRELLWHCDLDFTPFAYRLFSIFDEDNSGAVDFREFVLSTWNCCTMDQNSLIRFAFDLFDGDHSHAIETTEMEAMLREVYGESFVDSHTAALTLQRVKELSSQSEPKEPTKGAPVPKTAKDGLELDADGRVYALSFEAFRQV*GFCRQHPGMLLPAFTLQRRIRSKIVSESFWKGCSDRR 699 F +L+L E++K + ID DN G + ++ELL + D++ T F++R FS+FD +NSG +DFREFVLS WN CT+ +L + FDL+D D S + +E++AML+++YG++F + A + +K K L D D + F R H ML PAF +Q +I+ K+ FW+ CS+RR Sbjct: 20 FKALRLTDNEIRKFLNMYQAIDRDNSGAIDLQELLNYLDIENTSFSHRAFSVFDINNSGKIDFREFVLSLWNYCTLGNATLDVYTFDLYDKDKSGILSESEVQAMLKDLYGKTFQTNPRATAVMNAMK---------------------KSELRGDFDLPKFTK----------FVRSHQEMLFPAFQMQLKIQEKVFGRGFWERCSNRR 198
BLAST of mRNA_L-elsbetiae_contig2077.6272.1 vs. uniprot
Match: A0A4Q3A667_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q3A667_9BACT) HSP 1 Score: 130 bits (326), Expect = 1.220e-29 Identity = 74/211 (35.07%), Postives = 117/211 (55.45%), Query Frame = 1 Query: 70 FASLQLEQKELKKLWVEFGKIDTDNGGTVSIRELLWHCDLDFTPFAYRLFSIFDEDNSGAVDFREFVLSTWNCCTMDQNSLIRFAFDLFDGDHSHAIETTEMEAMLREVYGESFVDSH-TAALTLQRVKELSSQSEPKEPTKGAPVPKTAKDGLELDADGRVYALSFEAFRQV*GFCRQHPGMLLPAFTLQRRIRSKIVSESFWKGCSDRR 699 F +L+L E+++L+ F ++D D+ GTV ++ELL + ++ F R+FSIFDED SG +DFREFVLS WN CT+ + +L FAFDL+D ++ + E E +LR++YG + + TA +K++ ++S L++D F+ F Q HP +L PAF LQ +RS+++ FW+ S+RR Sbjct: 20 FDALKLRPSEVRQLYRIFARVDVDHSGTVGLKELLNYLEMGEAVFKDRVFSIFDEDGSGQIDFREFVLSLWNYCTLSKATLDLFAFDLYDKNNDGELSAEEAEDLLRDLYGAHYAQHNPTARFVAFELKKVCAES-----------------SLDIDR--------FQNFIQY------HPSLLFPAFQLQHALRSRVLGSGFWERASERR 199
BLAST of mRNA_L-elsbetiae_contig2077.6272.1 vs. uniprot
Match: A0A7S3XL51_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL51_HETAK) HSP 1 Score: 125 bits (314), Expect = 7.190e-29 Identity = 75/210 (35.71%), Postives = 109/210 (51.90%), Query Frame = 1 Query: 70 FASLQLEQKELKKLWVEFGKIDTDNGGTVSIRELLWHCDLDFTPFAYRLFSIFDEDNSGAVDFREFVLSTWNCCTMDQNSLIRFAFDLFDGDHSHAIETTEMEAMLREVYGESFVDSHTAALTLQRVKELSSQSEPKEPTKGAPVPKTAKDGLELDADGRVYALSFEAFRQV*GFCRQHPGMLLPAFTLQRRIRSKIVSESFWKGCSDRR 699 F SL L +++ L + ID DN GT+ ++EL+ + L + F R+F IFDED SG +DFREFV+S WN CT+ +N+L+ FAFDL E+E ML+EVYGE F S A L+ ++ + + L + ++ E F Q FCR+H +LLPAFT+Q +R + + W+ S RR Sbjct: 27 FKSLGLHNRDVWALHSSYAAIDGDNSGTIEVKELMAYLGLH-SQFTNRVFRIFDEDGSGELDFREFVVSMWNYCTLAKNALVMFAFDLXXXXXXXXXXXXEVELMLKEVYGEGFQASQLAQKVLRHMRMIDGDA-------------------RLPLSMQRCEVTAEQFGQ---FCRKHATLLLPAFTMQETLREAVGGKRLWERLSRRR 213
BLAST of mRNA_L-elsbetiae_contig2077.6272.1 vs. uniprot
Match: A0A7S3M126_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M126_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.500e-28 Identity = 82/237 (34.60%), Postives = 127/237 (53.59%), Query Frame = 1 Query: 1 MGTGRSSFNKAN----FRRGIRGYRQMFASLQLEQKELKKLWVEFGKIDTDNGGTVSIRELLWHCDLDFTPFAYRLFSIFDEDNSGAVDFREFVLSTWNCCTMDQNSLIRFAFDLFDGDHSHAIETTEMEAMLREVYGESFVDSHTAALTLQRVKELSSQSEPKEPTKGAPVPKTAKDGLELDADGRVYALSFEAFRQV*GFCRQHPGMLLPAFTLQRRIRSKIVSESFWKGCSDRR 699 MG S+F+ F++ + YR M QL +KE++KL+ EF K+D DN G++ + ELL H DL T + ++FSIFDED SG V+F+EFV++ WN CT+ ++L FAFDL+D D S I E+ ML +++G+ V ++ A + EL + K +D +D +F AF + H +L PAF +Q ++ K + +FW+ +DRR Sbjct: 1 MGCSTSAFDNEKHSPQFQKDLVQYRAM----QLSEKEVRKLYNEFRKVDMDNSGSIGLPELLAHLDLPVTDYTQKVFSIFDEDRSGEVEFKEFVMTLWNYCTLTSSTLEMFAFDLYDSDGSGEISPNEVTQMLTDLFGKHEVKTNQHAKVMAA--ELLDHA------------KNFRDPFTID--------TFRAF------VKTHQALLFPAFQMQLALQRKFLGTAFWEKNADRR 205
BLAST of mRNA_L-elsbetiae_contig2077.6272.1 vs. uniprot
Match: D7FMZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ9_ECTSI) HSP 1 Score: 120 bits (302), Expect = 1.170e-27 Identity = 66/168 (39.29%), Postives = 94/168 (55.95%), Query Frame = 1 Query: 196 TPFAYRLFSIFDEDNSGAVDFREFVLSTWNCCTMDQNSLIRFAFDLFDGDHSHAIETTEMEAMLREVYGESFVDSHTAALTLQRVKELSSQSEPKEPTKGAPVPKTAKDGLELDADGRVYALSFEAFRQV*GFCRQHPGMLLPAFTLQRRIRSKIVSESFWKGCSDRR 699 + F R+F IFDED SG+VDFREFV+S WN CT+ + +LI FAFDL+D D+S I+ E+E +L+EVYG F + A + +++ G EL G ++ + FR+ FCR HP +L PAF LQ +++ KI+ FW CS+ R Sbjct: 4 SKFTKRIFRIFDEDGSGSVDFREFVMSLWNYCTLSKAALIMFAFDLYDNDNSGEIDIGEVELLLKEVYGREFQSNTHAQTIMAKLR-----------------------GSEL---GLARNINVDQFRE---FCRTHPAVLYPAFVLQTQMQEKILGSKFWIACSNAR 142
BLAST of mRNA_L-elsbetiae_contig2077.6272.1 vs. uniprot
Match: A0A482UUD7_9ARCH (EF-hand domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UUD7_9ARCH) HSP 1 Score: 116 bits (291), Expect = 7.960e-27 Identity = 57/137 (41.61%), Postives = 90/137 (65.69%), Query Frame = 1 Query: 19 SFNKANFRRGIRGYRQMFASLQLEQKELKKLWVEFGKIDTDNGGTVSIRELLWHCDLDFTPFAYRLFSIFDEDNSGAVDFREFVLSTWNCCTMDQNSLIRFAFDLFDGDHSHAIETTEMEAMLREVYGESFVDSHTA 429 +FN+ R + + + F +L + + E+K+L+ +F + D D GGT+ + ELL D++ TPF R+F IFD+DNSG +DF EFVLS WN CT+ + +L FAFDL+D D + +E ++E M+ ++YG++ SH A Sbjct: 10 AFNRLASRPEFQIWTRKFEALCIHKAEVKRLYQKFAEADMDGGGTIDLLELLTVIDVERTPFTERIFQIFDDDNSGKIDFGEFVLSLWNYCTLSKVTLGMFAFDLYDRDSTGILEDYDLEKMMVDIYGKNAGTSHYA 146
BLAST of mRNA_L-elsbetiae_contig2077.6272.1 vs. uniprot
Match: A0A7S1UAP5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAP5_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.270e-25 Identity = 70/214 (32.71%), Postives = 106/214 (49.53%), Query Frame = 1 Query: 61 RQMFASLQLEQKELKKLWVEFGKIDTDNGGTVSIRELLWHCDLDF-TPFAYRLFSIFDEDNSGAVDFREFVLSTWNCCTMDQNSLIRFAFDLFDGDHSHAIETTEMEAMLREVYGESFVDSHTAALTLQRVKELSSQSEPKEPTKGAPVPKTAKDGLELDADGRVYALSFEAFRQV*GFCRQHPGMLLPAFTLQRRIRSKIVSESFWKGCSDRR 699 R+ F +L L++ ++ KL+ F IDT +++ E L +L F R+F+I D+D +G +DFREFV+S WN C++ Q SL FAFDL+D D S I+T E+E ML+++YG + A + V + L L+ ++ F F + H +L PAF +QR ++ KI FWK CS R Sbjct: 31 RKSFEALHLDEHDVAKLFAVFTSIDTTGTSELTLNEFLKFANLPLENSFVERVFAIMDDDENGTIDFREFVVSVWNYCSLSQASLSMFAFDLYDRDGSGEIDTCEVEEMLQDIYGAEWKAHQPARRVMNSV-----------------------ERLRLEEGEEEVCITPATFSS---FTKHHTELLRPAFRMQRILQEKICGVDFWKKCSSER 218 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2077.6272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2077.6272.1 >prot_L-elsbetiae_contig2077.6272.1 ID=prot_L-elsbetiae_contig2077.6272.1|Name=mRNA_L-elsbetiae_contig2077.6272.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=470bp MLLPAFTLQRRIRSKIVSESFWKGCSDRRNGGRPGGGGRGKKRKHPPPRQback to top mRNA from alignment at L-elsbetiae_contig2077:8798..15064- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2077.6272.1 ID=mRNA_L-elsbetiae_contig2077.6272.1|Name=mRNA_L-elsbetiae_contig2077.6272.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6267bp|location=Sequence derived from alignment at L-elsbetiae_contig2077:8798..15064- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2077:8798..15064- >mRNA_L-elsbetiae_contig2077.6272.1 ID=mRNA_L-elsbetiae_contig2077.6272.1|Name=mRNA_L-elsbetiae_contig2077.6272.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2820bp|location=Sequence derived from alignment at L-elsbetiae_contig2077:8798..15064- (Laminarionema elsbetiae ELsaHSoW15)back to top |