prot_L-elsbetiae_contig20742.6256.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig20742.6256.1
Unique Nameprot_L-elsbetiae_contig20742.6256.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length53
Homology
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BLAST of mRNA_L-elsbetiae_contig20742.6256.1 vs. uniprot
Match: D7G857_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G857_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 1.150e-25
Identity = 46/53 (86.79%), Postives = 48/53 (90.57%), Query Frame = 0 
Query:    1 FPGCSHIIIADADWRPKLETVDKSELDFVHGSFPFLVWDHSGHTSRLVGWLLR 53
            FP  SHII+ADADWRP L TVDKSELDFVHGSFPFLVWDHSGHTSRL+GWL R
Sbjct:  162 FPDTSHIIVADADWRPDLATVDKSELDFVHGSFPFLVWDHSGHTSRLMGWLHR 214
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BLAST of mRNA_L-elsbetiae_contig20742.6256.1 vs. uniprot
Match: A0A482RZ88_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ88_9ARCH)

HSP 1 Score: 61.2 bits (147), Expect = 4.770e-10
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0 
Query:    1 FPGCSHIIIADADWRPKLETVDKSELDFVHGSFPFLVWDHSGHTSRLVGWLL 52
            F   SH++IAD DW+P +ET+DK+ELD     F F+V+D SG T R + W L
Sbjct:  100 FSKASHVMIADPDWKPSVETIDKAELDDSALVFRFMVFDRSGETRRYIDWCL 151
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20742.6256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G857_ECTSI1.150e-2586.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A482RZ88_9ARCH4.770e-1050.00Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20742contigL-elsbetiae_contig20742:299..457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20742.6256.1mRNA_L-elsbetiae_contig20742.6256.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig20742 299..457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig20742.6256.1 ID=prot_L-elsbetiae_contig20742.6256.1|Name=mRNA_L-elsbetiae_contig20742.6256.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=53bp
FPGCSHIIIADADWRPKLETVDKSELDFVHGSFPFLVWDHSGHTSRLVGW
LLR
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