prot_L-elsbetiae_contig20732.6252.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig20732.6252.1
Unique Nameprot_L-elsbetiae_contig20732.6252.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length225
Homology
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BLAST of mRNA_L-elsbetiae_contig20732.6252.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 3.530e-17
Identity = 52/79 (65.82%), Postives = 58/79 (73.42%), Query Frame = 0 
Query:   21 IDLIFEVLRADQWAELLRAPLERAAAKGNRDLAQRLAGAGAKSGDALHDAARHGHGEIVSDLLGSGVSLAAKNAYGFTP 99
            +D IFE+L + Q AELLRA LE AAAKGN+DLAQRL  AGA+ GDALH A   GH EIVSDLL S  SLAA +  G TP
Sbjct:    2 VDFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMDGRTP 80
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BLAST of mRNA_L-elsbetiae_contig20732.6252.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 4.850e-6
Identity = 37/84 (44.05%), Postives = 47/84 (55.95%), Query Frame = 0 
Query:   20 TIDLIFEVLRADQWAELLRAPLERAAAKGNRDLAQRLAGAGAKSGDA---------LHDAARHGHGEIVSDL--LGSGVSLAAK 92
            T  L+ +    DQWAE LRAPLE AAA GNRDL  +L GAGA  G           LH AA  G+ ++++ L   G+G  + AK
Sbjct:   60 TFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAK 143
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20732.6252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXK5_9PHAE3.530e-1765.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHQ7_ECTSI4.850e-644.05F-box domain and ankyrin repeat protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 178..192
score: 30.44
coord: 96..111
score: 43.26
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 62..91
e-value: 170.0
score: 10.7
coord: 95..124
e-value: 3.2E-5
score: 33.4
coord: 162..191
e-value: 0.44
score: 19.6
coord: 128..157
e-value: 0.21
score: 20.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 62..94
score: 9.351
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 95..127
score: 14.078
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 167..194
score: 8.71
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 128..160
score: 9.084
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 25..201
e-value: 1.7E-37
score: 130.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 36..194
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 41..125
e-value: 2.6E-12
score: 47.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 62..194
score: 35.941
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 66..221
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 29..126
NoneNo IPR availablePANTHERPTHR24189:SF55IQ MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN LOC642574-RELATEDcoord: 66..221
coord: 29..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20732contigL-elsbetiae_contig20732:216..890 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20732.6252.1mRNA_L-elsbetiae_contig20732.6252.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig20732 11..890 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig20732.6252.1 ID=prot_L-elsbetiae_contig20732.6252.1|Name=mRNA_L-elsbetiae_contig20732.6252.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp
MDTVGNSNGREALRGAEVPTIDLIFEVLRADQWAELLRAPLERAAAKGNR
DLAQRLAGAGAKSGDALHDAARHGHGEIVSDLLGSGVSLAAKNAYGFTPL
HVAAWRGETKIVQLLLLKGADKDAIDGDELTPLCLAAHQGHVAAALALLA
AGADVSLQCGEIKQQVMTVAAEKGHVDILRAVIEHGADVHAVTRHSSPCS
RGEEPRRGHRCARRGWGQHRSTGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom