mRNA_L-elsbetiae_contig2073.6251.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2073.6251.1
Unique NamemRNA_L-elsbetiae_contig2073.6251.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig2073.6251.1 vs. uniprot
Match: A0A6H5KYT3_9PHAE (Aurora kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYT3_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 4.240e-83
Identity = 152/268 (56.72%), Postives = 196/268 (73.13%), Query Frame = 2 
Query:    2 TSNGKLVALKIIQKEWIYQNEVGALVQREIDIVRELDHPCLVKLIEVFNSADDVFMVMEAVDGSDLHEELRQRGRMEEARARGLFQQLMTAVQYLHSIGVAHRDIKLENVLLSKDGARVYLADLGLAARLDEWEDSGDGAQGKKGRLSFRWSSNRRGSQGHQSLSCGTPSYAAPEIIASSDKHRYDARGVDTWSAGVCLYAMATGTLPFGAGSGSLLDTLNAVQTAEPVFPEHLSSPLVDLLRGMLRKDPAKRMTVAAVLSNPWTTTR 805
            T+N +LVALKI+ KEWI++N++ +LV+REI I++ELDHPC+VKL+EVFNS   VFM ME ++G +L  ELR+ G + E R+R +FQQLMTAV+YLHSIGVAHR+IKLENVLLS+DG R+ L D  LA  LDEWE    G   + GR S+R   + R     Q  +  T +YAAPE+IA+++ HRYDARGVDTW AG+CL+A+ TG LPF A       TL  +QT EP +PE L   L DLLRGMLRKD +KR++V AV+ +PWT+ R
Sbjct:    9 TANDELVALKIMLKEWIWKNDMSSLVRREIAIMKELDHPCVVKLVEVFNSETHVFMAMETIEGRELRTELRREGYLSEERSRNIFQQLMTAVRYLHSIGVAHRNIKLENVLLSEDGERIKLTDFELATHLDEWE----GGSFQDGRKSWRTKKSHR----RQQSTGRTAAYAAPEVIAATEDHRYDARGVDTWCAGLCLFALVTGRLPFRAKGSEA--TLGIIQTMEPTYPEGLPPLLTDLLRGMLRKDSSKRLSVPAVIGHPWTSAR 266
[Close]
BLAST of mRNA_L-elsbetiae_contig2073.6251.1 vs. uniprot
Match: D7FSU0_ECTSI (Aurora kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSU0_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 1.690e-70
Identity = 139/268 (51.87%), Postives = 181/268 (67.54%), Query Frame = 2 
Query:    2 TSNGKLVALKIIQKEWIYQNEVGALVQREIDIVRELDHPCLVKLIEVFNSADDVFMVMEAVDGSDLHEELRQRGRMEEARARGLFQQLMTAVQYLHSIGVAHRDIKLENVLLSKDGARVYLADLGLAARLDEWEDSGDGAQGKKGRLSFRWSSNRRGSQGHQSLSCGTPSYAAPEIIASSDKHRYDARGVDTWSAGVCLYAMATGTLPFGAGSGSLLDTLNAVQTAEPVFPEHLSSPLVDLLRGMLRKDPAKRMTVAAVLSNPWTTTR 805
            T+N +LVALKI+ KEWI++N++ +LV+REI I++ELDHPC+VKL+EVFNS   VFM MEA++G +L  ELR+ G + E R+R +FQQL                   ENVLLS+DG R+ L D  LA  LDEWE    G   ++GR S+R     R S   Q  +  TP+YAAPE+IA+++ HRYDARGVDTW AG+CL+A+ TG LPF A       TL  +QT EP +PE L   L DLLRGMLRKDP+KR++V AV+ +PWT+ R
Sbjct:   39 TANDELVALKIMLKEWIWKNDMSSLVRREIGIMKELDHPCVVKLVEVFNSETHVFMAMEAIEGRELRTELRREGYLSEERSRNIFQQL-------------------ENVLLSEDGERIKLTDFELATHLDEWE----GGSFQEGRKSWR----ARKSHRRQQSAGRTPAYAAPEVIAATEDHRYDARGVDTWCAGLCLFALVTGRLPFRAKGSEA--TLGIIQTMEPTYPEGLPPLLTDLLRGMLRKDPSKRLSVPAVMGHPWTSAR 277
[Close]
BLAST of mRNA_L-elsbetiae_contig2073.6251.1 vs. uniprot
Match: A0A836CAF3_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF3_9STRA)

HSP 1 Score: 170 bits (431), Expect = 4.510e-45
Identity = 101/264 (38.26%), Postives = 144/264 (54.55%), Query Frame = 2 
Query:    2 TSNGKLVALKIIQKEWIYQNEVGALVQREIDIVRELDHPCLVKLIEVFNSADDVFMVMEAVDGSDLHEELRQRGRMEEARARGLFQQLMTAVQYLHSIGVAHRDIKLENVLLSKDGARVYLADLGLAARLDEWEDSGDGAQGKKGRLSFRWSSNRRGSQGHQSLSCGTPSYAAPEIIASSDKHRYDARGVDTWSAGVCLYAMATGTLPFGAGSGSLLDTLNAVQTAEPVFPEHLSSPLVDLLRGMLRKDPAKRMTVAAVLSNPW 793
            +  G+ VA+K++ K WI  N + A V REI ++  L H  +V+L EV NS   V+MVME V G +L++E+ ++  + E RAR  F+Q++  + YLHS GV HRD+K EN+L+S DG  + + D GL+A                  +  R +S+RR     Q   CGTP Y APE+        YDAR  D WSAG+ L+ M  G LPF   S      L+ + T E V P H S+   DL+  ML K+   R+++  V  +PW
Sbjct:   58 SETGEHVAVKVMSKTWIQDNGMTAAVNREITLMSNLKHRNVVELKEVMNSPTSVYMVMELVKGHELYDEIVEQVMLPEPRARKYFRQIVDGIAYLHSQGVVHRDLKPENILVSSDGV-IKITDFGLSA------------------MCGRGNSHRR-----QRSVCGTPYYTAPEVFGGGGARSYDARRADVWSAGIVLFTMLAGQLPFEGNSAE--QALDLISTQEVVCPAHFSAEARDLVARMLTKEATTRISLEGVALHPW 295
[Close]
BLAST of mRNA_L-elsbetiae_contig2073.6251.1 vs. uniprot
Match: C1N0P2_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N0P2_MICPC)

HSP 1 Score: 150 bits (379), Expect = 1.480e-38
Identity = 96/261 (36.78%), Postives = 135/261 (51.72%), Query Frame = 2 
Query:   11 GKLVALKIIQKEWIYQNEVGALVQREIDIVRELDHPCLVKLIEVFNSADDVFMVMEAVDGSDLHEELRQRGRMEEARARGLFQQLMTAVQYLHSIGVAHRDIKLENVLLSKDGARVYLADLGLAARLDEWEDSGDGAQGKKGRLSFRWSSNRRGSQGHQSLSCGTPSYAAPEIIASSDKHRYDARGVDTWSAGVCLYAMATGTLPFGAGSGSLLDTLNAVQTAEPVFPEHLSSPLVDLLRGMLRKDPAKRMTVAAVLSNPW 793
            G   A+K+I K  +        V REI +++ L H  +++L +V +  D +F+VME  DG  L + +R R R+ E  +  +F+Q+   + Y H+ GV HRD+KLENVLL  + A V + D GL+A L           G++ R+                  CG+PSYAAPEI+A   +  YD   VD WSAGV L+AM TG LPF A  G   +    +       PE  +    DL+  +LR DPAKR T A VL + W
Sbjct:   24 GAKTAVKLIDKTKLTDVNDRKRVGREIRVLKRLTHESIIRLFDVVDGIDKMFVVMEYADGGSLLDHVRARKRLSERESARMFRQMCAGLMYCHANGVVHRDVKLENVLLDAN-ANVKIIDFGLSAVL---------TPGRRLRVH-----------------CGSPSYAAPEIVA---RREYDGPPVDVWSAGVVLFAMVTGYLPFHAPKGEKQELCRKIMKGAFTTPESCARDFRDLVANILRVDPAKRATFAQVLESKW 254
[Close]
BLAST of mRNA_L-elsbetiae_contig2073.6251.1 vs. uniprot
Match: A0A165IPY8_EXIGL (Non-specific serine/threonine protein kinase n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165IPY8_EXIGL)

HSP 1 Score: 157 bits (397), Expect = 3.940e-38
Identity = 100/267 (37.45%), Postives = 143/267 (53.56%), Query Frame = 2 
Query:   11 GKLVALKIIQKEWIYQNEVGALVQREIDIVRELDHPCLVKLIEVFNSADDVFMVMEAVDGSDLHEELRQRGRMEEARARGLFQQLMTAVQYLHSIGVAHRDIKLENVLLSKDGARVYLADLGLAARLDEWEDSGDGAQGKKGRLSFRWSSNRRGSQGHQSLSCGTPSYAAPEIIASSDKHRYDARGVDTWSAGVCLYAMATGTLPFGAGSGSLLDTLNAVQTAEPVFPEHLSSPLVDLLRGMLRKDPAKRMTVAAVLSNPWTTTRTP 811
            G  VA+K I K+ I   +    VQRE+D +R L HP ++KL EV N+  D+ +V+E V G +L   +   GRM+E +AR  FQQL++ + Y H + V HRD+K ENVLL  D   V +AD GL+ R+ + E              F+              SCG+P+YAAPE+I  +    Y+   +D WS GV L+ M  G LPF     ++ +  N + + +   P H+SS    LL GML  DP KR+T+  +L +PW T   P
Sbjct:   42 GHRVAMKYISKKMINATKTKTRVQREVDYMRMLRHPHIIKLYEVINTTTDIIIVLEYVAG-ELFNYIVANGRMKEDKARRFFQQLISGIDYSHRLKVVHRDLKPENVLLDDD-LNVKIADFGLSNRMIDGEF-------------FK-------------TSCGSPNYAAPEVIRGT---LYEGPEIDVWSCGVVLFVMLCGRLPFE--DDNINNLFNKITSGQFTVPMHVSSEAKFLLHGMLNTDPLKRLTIPDILRSPWFTKDLP 275
[Close]
BLAST of mRNA_L-elsbetiae_contig2073.6251.1 vs. uniprot
Match: A0A250XDE8_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XDE8_9CHLO)

HSP 1 Score: 159 bits (401), Expect = 5.560e-38
Identity = 100/258 (38.76%), Postives = 139/258 (53.88%), Query Frame = 2 
Query:   20 VALKIIQKEWIYQNEVGALVQREIDIVRELDHPCLVKLIEVFNSADDVFMVMEAVDGSDLHEELRQRGRMEEARARGLFQQLMTAVQYLHSIGVAHRDIKLENVLLSKDGARVYLADLGLAARLDEWEDSGDGAQGKKGRLSFRWSSNRRGSQGHQSLSCGTPSYAAPEIIASSDKHRYDARGVDTWSAGVCLYAMATGTLPFGAGSGSLLDTLNAVQTAEPVFPEHLSSPLVDLLRGMLRKDPAKRMTVAAVLSNPW 793
            VA+KI+ K  +        +QREI ++R L HPC++KL EV ++ + +++VME      L + +R R R+ E  A  + QQ++  + Y HS  V HRDIKLEN+LL  D  ++ L D GL+A             GKK R+                  CG+PSYAAPEI+A   + +YD    D WS GV L+A  +G LPF + SG   +  N +   +   PEHL+S   DLL  ML  DP+KR T   VLS+PW
Sbjct:  888 VAIKIVDKTLLADANEAKRMQREIRVMRHLTHPCVIKLFEVVDAQNYLYLVMEHSQNGSLLDYVRARKRLTEPDAVNVLQQIVAGLMYCHSREVVHRDIKLENILLDTDD-QMKLIDFGLSAFY---------LPGKKLRVH-----------------CGSPSYAAPEIVA---RKQYDGPPTDVWSLGVVLFACLSGFLPFHSSSGDKKELCNKIMEGKYTAPEHLTSHAKDLLSRMLTVDPSKRTTFEGVLSHPW 1115
[Close]
BLAST of mRNA_L-elsbetiae_contig2073.6251.1 vs. uniprot
Match: F0W8G0_9STRA (Non-specific serine/threonine protein kinase n=3 Tax=Albugo TaxID=65356 RepID=F0W8G0_9STRA)

HSP 1 Score: 154 bits (388), Expect = 7.590e-38
Identity = 93/264 (35.23%), Postives = 144/264 (54.55%), Query Frame = 2 
Query:    2 TSNGKLVALKIIQKEWIYQNEVGALVQREIDIVRELDHPCLVKLIEVFNSADDVFMVMEAVDGSDLHEELRQRGRMEEARARGLFQQLMTAVQYLHSIGVAHRDIKLENVLLSKDGARVYLADLGLAARLDEWEDSGDGAQGKKGRLSFRWSSNRRGSQGHQSLSCGTPSYAAPEIIASSDKHRYDARGVDTWSAGVCLYAMATGTLPFGAGSGSLLDTLNAVQTAEPVFPEHLSSPLVDLLRGMLRKDPAKRMTVAAVLSNPW 793
            T N + VA+K++ KE I +  +GA +++EI I++ + H  +V L EV  S   +F+V+E + G +L +++   GR  E  AR  FQQL+  V+Y H  GV HRD+K EN+LL ++G  + ++D GL+A  +     G G   +   L                 +CGTP+Y APE++A      YD R  D WS GV LY +  G LPF   + S L     +Q AE  +P   S  +++LL  +L  DP +R+T+A + ++ W
Sbjct:   28 TENDERVAIKVLDKEKIQKQNMGAQIKKEISIMKMVRHRHVVVLKEVLASRTKIFIVLELITGGELFDKIVSEGRFNETTARFYFQQLVDGVKYCHENGVCHRDLKPENLLLDENGD-LKISDFGLSALYEGGNPDGTGESSRASLLH---------------TTCGTPNYVAPEVLADKG---YDGRAADVWSIGVILYVLLAGFLPFDEPTMSAL--FRKIQKAEFSYPSWFSPRVINLLNHILVPDPEQRVTLADIQTDDW 270
[Close]
BLAST of mRNA_L-elsbetiae_contig2073.6251.1 vs. uniprot
Match: A0A5A8D7M2_CAFRO (Protein kinase domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D7M2_CAFRO)

HSP 1 Score: 152 bits (384), Expect = 2.850e-37
Identity = 101/279 (36.20%), Postives = 152/279 (54.48%), Query Frame = 2 
Query:    2 TSNGKLVALKIIQKEWIYQNEVGALVQREIDIVRELDHPCLVKLIEVFNSADDVFMVMEAVDGSDLHEELRQRGRMEEARARGLFQQLMTAVQYLHSIGVAHRDIKLENVLLSKDGARVYLADLGLAARLDEWEDSGDGAQGKKGRLSFRWSSNRRGSQGHQSLSCGTPSYAAPEIIASSDKHRYDARGVDTWSAGVCLYAMATGTLPFGAGSGSLLDTLNAVQTAEPVFPEHLSSPLVDLLRGMLRKDPAKRMTVAAVLSNPWTTT----RTPAVAPG 826
            T   + VA+KI+ KE I +  +GA +++EI I++ + HP +VKL EV  S   +F+V+E V G +L +++   GR  E  AR  F++L+  V+Y HS GVAHRD+K EN+LL    + + ++D GL+A       +G+G   +   L                 +CGTP+Y APE++  +DK  YD R  D WS GV LY +  G LPF   + S L     +Q AE  FP  +     DL+  +L  DP KR+TV  ++++PW       + P + PG
Sbjct:   28 TETNQKVAIKILDKEKIQRQNMGAQIKKEISIMKMVRHPNVVKLHEVLASRTKIFIVLELVTGGELFDKIVAEGRFSEETARFYFRELIGGVRYCHSKGVAHRDLKPENLLLDPR-SNLKISDFGLSALY-----TGEGDSTRTTLLH---------------TTCGTPNYVAPEVL--NDKG-YDGRAADVWSCGVILYVLLAGFLPFDEDTMSKL--FAKIQKAEYQFPVWIKESARDLIAKILVPDPTKRLTVDDIMTHPWFVGTDGYKPPTLTPG 280
[Close]
BLAST of mRNA_L-elsbetiae_contig2073.6251.1 vs. uniprot
Match: UPI002008896D (uncharacterized protein n=1 Tax=Puccinia striiformis f. sp. tritici TaxID=168172 RepID=UPI002008896D)

HSP 1 Score: 152 bits (385), Expect = 5.120e-37
Identity = 100/286 (34.97%), Postives = 151/286 (52.80%), Query Frame = 2 
Query:    2 TSNGKLVALKIIQKEWIYQ-----NEVGAL-------VQREIDIVRELDHPCLVKLIEVFNSADDVFMVMEAVDGSDLHEELRQRGRMEEARARGLFQQLMTAVQYLHSIGVAHRDIKLENVLLSKDGARVYLADLGLAARLDEWEDSGDGAQGKKGRLSFRWSSNRRGSQGHQSLSCGTPSYAAPEIIASSDKHRYDARGVDTWSAGVCLYAMATGTLPFGAGSGSLLDTLNAVQTAEPVFPEHLSSPLVDLLRGMLRKDPAKRMTVAAVLSNPWTTTRTPAVAP 823
            T  G   A+KI+ +  +       N+ GA        ++REI I++ +DHP +++L +V+ ++ ++++VME V+G +L E L  RGR+ E  A   FQQ++  V Y H   + HRD+K EN+LL K    + +AD G+AA    WE SG   +                       SCG+P YA+PEI+A  + H   +   D WS GV L+A+ TG LPF   + S  D L  V+      P  +S P+ DL+R ML  DP KR+T+  + ++PW T  TP + P
Sbjct:   21 TVTGHPAAVKIVPRHLLPNSRMSINQAGAHADKRLLGIEREIVIMKLIDHPNVMRLYDVYENSHEIYLVMEYVEGGELFEYLVSRGRLSEDEALNYFQQIIRGVDYCHRFNICHRDLKPENLLLDKAN-NIKIADFGMAA----WEASGKLLE----------------------TSCGSPHYASPEIVAGINYHGSSS---DIWSCGVILFALLTGRLPFDDENVS--DLLTKVRIGVFNMPPDISGPVQDLIRRMLTVDPMKRLTMEEIQAHPWFTRITPKLQP 274
[Close]
BLAST of mRNA_L-elsbetiae_contig2073.6251.1 vs. uniprot
Match: A0A8K1CJ01_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJ01_PYTOL)

HSP 1 Score: 151 bits (382), Expect = 5.240e-37
Identity = 94/264 (35.61%), Postives = 146/264 (55.30%), Query Frame = 2 
Query:    2 TSNGKLVALKIIQKEWIYQNEVGALVQREIDIVRELDHPCLVKLIEVFNSADDVFMVMEAVDGSDLHEELRQRGRMEEARARGLFQQLMTAVQYLHSIGVAHRDIKLENVLLSKDGARVYLADLGLAARLDEWEDSGDGAQGKKGRLSFRWSSNRRGSQGHQSLSCGTPSYAAPEIIASSDKHRYDARGVDTWSAGVCLYAMATGTLPFGAGSGSLLDTLNAVQTAEPVFPEHLSSPLVDLLRGMLRKDPAKRMTVAAVLSNPW 793
            T  G+ VA+K++ KE I +  +GA +++EI I++ + H  +V L EV  S   +F+V+E + G +L +++   GR  E  AR  F+QL+  VQY H  GV HRD+K EN+LL ++G  + ++D GL+A  D     G G  G+  R S   ++            CGTP+Y APE++A      YD R  D WS GV LY +  G LPF   + S L     +Q AE  +P   +  + +LL  +L  DP  R+++A ++++ W
Sbjct:   28 TETGERVAIKVLDKEKIQKQNMGAQIKKEISIMKMVRHKHVVVLKEVLASRTKIFIVLELITGGELFDKIVSEGRFSEDTARFYFRQLVDGVQYCHQNGVCHRDLKPENLLLDENGD-LKISDFGLSALYD-----GGGEGGETSRASLLHTT------------CGTPNYVAPEVLADKG---YDGRAADVWSMGVILYVLLAGFLPFDEPTMSAL--FRKIQKAEFSYPSWFTPRVKNLLNRVLVPDPTTRVSLADIMNDDW 268
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2073.6251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYT3_9PHAE4.240e-8356.72Aurora kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FSU0_ECTSI1.690e-7051.87Aurora kinase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A836CAF3_9STRA4.510e-4538.26Kinase-like domain-containing protein n=1 Tax=Trib... [more]
C1N0P2_MICPC1.480e-3836.78Predicted protein (Fragment) n=1 Tax=Micromonas pu... [more]
A0A165IPY8_EXIGL3.940e-3837.45Non-specific serine/threonine protein kinase n=1 T... [more]
A0A250XDE8_9CHLO5.560e-3838.76Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
F0W8G0_9STRA7.590e-3835.23Non-specific serine/threonine protein kinase n=3 T... [more]
A0A5A8D7M2_CAFRO2.850e-3736.20Protein kinase domain-containing protein n=2 Tax=C... [more]
UPI002008896D5.120e-3734.97uncharacterized protein n=1 Tax=Puccinia striiform... [more]
A0A8K1CJ01_PYTOL5.240e-3735.61Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2073contigL-elsbetiae_contig2073:12603..17168 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score186.8
Seed ortholog evalue2.1e-44
Seed eggNOG ortholog2880.D7FSU0
KEGG koko:K07198
KEGG Pathwayko04068,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04371,ko04530,ko04710,ko04714,ko04910,ko04920,ko04921,ko04922,ko04931,ko04932,ko05410,ko05418,map04068,map04140,map04150,map04151,map04152,map04211,map04213,map04371,map04530,map04710,map04714,map04910,map04920,map04921,map04922,map04931,map04932,map05410,map05418
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0583@1,KOG0583@2759
EC2.7.11.11
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03029,ko04131
Exons6
Model size1462
Cds size1293
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2073.6251.1prot_L-elsbetiae_contig2073.6251.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2073 12606..15987 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815852.0641267-UTR-L-elsbetiae_contig2073:12602..126051622815852.0641267-UTR-L-elsbetiae_contig2073:12602..12605Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2073 12603..12605 -
1691683146.3941207-UTR-L-elsbetiae_contig2073:12602..126051691683146.3941207-UTR-L-elsbetiae_contig2073:12602..12605Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2073 12603..12605 -
1622815852.137457-UTR-L-elsbetiae_contig2073:15987..160491622815852.137457-UTR-L-elsbetiae_contig2073:15987..16049Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2073 15988..16049 -
1691683146.4542906-UTR-L-elsbetiae_contig2073:15987..160491691683146.4542906-UTR-L-elsbetiae_contig2073:15987..16049Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2073 15988..16049 -
1622815852.149928-UTR-L-elsbetiae_contig2073:17064..171681622815852.149928-UTR-L-elsbetiae_contig2073:17064..17168Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2073 17065..17168 -
1691683146.4627638-UTR-L-elsbetiae_contig2073:17064..171681691683146.4627638-UTR-L-elsbetiae_contig2073:17064..17168Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2073 17065..17168 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815852.0764236-CDS-L-elsbetiae_contig2073:12605..133461622815852.0764236-CDS-L-elsbetiae_contig2073:12605..13346Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2073 12606..13346 -
1691683146.4066749-CDS-L-elsbetiae_contig2073:12605..133461691683146.4066749-CDS-L-elsbetiae_contig2073:12605..13346Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2073 12606..13346 -
1622815852.0869753-CDS-L-elsbetiae_contig2073:14346..145121622815852.0869753-CDS-L-elsbetiae_contig2073:14346..14512Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2073 14347..14512 -
1691683146.4151328-CDS-L-elsbetiae_contig2073:14346..145121691683146.4151328-CDS-L-elsbetiae_contig2073:14346..14512Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2073 14347..14512 -
1622815852.0977933-CDS-L-elsbetiae_contig2073:14920..150481622815852.0977933-CDS-L-elsbetiae_contig2073:14920..15048Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2073 14921..15048 -
1691683146.4237554-CDS-L-elsbetiae_contig2073:14920..150481691683146.4237554-CDS-L-elsbetiae_contig2073:14920..15048Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2073 14921..15048 -
1622815852.1092296-CDS-L-elsbetiae_contig2073:15506..156681622815852.1092296-CDS-L-elsbetiae_contig2073:15506..15668Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2073 15507..15668 -
1691683146.4326925-CDS-L-elsbetiae_contig2073:15506..156681691683146.4326925-CDS-L-elsbetiae_contig2073:15506..15668Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2073 15507..15668 -
1622815852.120469-CDS-L-elsbetiae_contig2073:15891..159871622815852.120469-CDS-L-elsbetiae_contig2073:15891..15987Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2073 15892..15987 -
1691683146.44162-CDS-L-elsbetiae_contig2073:15891..159871691683146.44162-CDS-L-elsbetiae_contig2073:15891..15987Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2073 15892..15987 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2073.6251.1

>prot_L-elsbetiae_contig2073.6251.1 ID=prot_L-elsbetiae_contig2073.6251.1|Name=mRNA_L-elsbetiae_contig2073.6251.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=431bp
MVMEAVDGSDLHEELRQRGRMEEARARGLFQQLMTAVQYLHSIGVAHRDI
KLENVLLSKDGARVYLADLGLAARLDEWEDSGDGAQGKKGRLSFRWSSNR
RGSQGHQSLSCGTPSYAAPEIIASSDKHRYDARGVDTWSAGVCLYAMATG
TLPFGAGSGSLLDTLNAVQTAEPVFPEHLSSPLVDLLRGMLRKDPAKRMT
VAAVLSNPWTTTRTPAVAPGRGAAAGAGAGADADKAAGLPARSSASASHQ
IAWLRAAAPPGRPHRSSSDALDIVAPPDRQHRSTSDAAISTVAPPERQHR
STSDAISSVAPPGRQYRRSASDAISTVAPPERQHRSTSDAISSVAPPGRQ
YRRSASDAISTVAPPERQHHSSSDTIDSGVVPPCRQLSSLSSALRSVARP
GRQLRSLSEALGSSAPPAGSSLASPTSSAP*
back to top

mRNA from alignment at L-elsbetiae_contig2073:12603..17168-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2073.6251.1 ID=mRNA_L-elsbetiae_contig2073.6251.1|Name=mRNA_L-elsbetiae_contig2073.6251.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4566bp|location=Sequence derived from alignment at L-elsbetiae_contig2073:12603..17168- (Laminarionema elsbetiae ELsaHSoW15)
CACCAGCAACGGCAAGCTCGTGGCGCTCAAGATAATACAGAAGGAGTGGA
TCTACCAGAACGAAGTCGGAGCCCTCGTCCAGCGGGAGATCGACATCGTG
CGGGGTATGTAGAGACGTCGACACACGGGGGGGGGCGGTGGAGTGGACCT
TTACACTTTGTCGATAAAATAAAGTTATGAGAACGTTCTCTGGTTCTCTC
TTGGCCTGTTGACAACCCGAGGATTACCAGGCGTTCGGTGGGGGGATCCG
TGGGCGGAGATACCCCCGAGGCTAGCTGGACTGACAGAGCGTTTTGAGAA
CCGAGCGGATACCGTTTCAATTCAAGCCCTGACCAACTTTTTATGTTTTG
TCATATACCCTTGCGCTAACCCCAGCCCTGACCCTAACCCCAACCCGACC
GACCCGTCGGGGGGCATTGAGAAAGTCTTGGGTCACAGGGCGTTGGTTAG
GTGCTAGGTTGGAGGGCAGGGGTAGGGCTAGGCCGCGGCTAGGTCGCGCG
CGCGCTTTTGACTGCCCCGCACACACGTCACAGAACCACGCCCAAAAGAT
CAGAATATTCCCAGAACTCGCTCTGTCGACAGAGGGGCAAGGTCTACTGG
GGGATCGTGTGCGCAGCATGCATCTAGAGTAAACAGACGTGATATCGTAA
TACCTCTGTCCAGTCAAGTCCAATCGAAATGGTCGCGCGGAGCGAGGTTC
CAATTTTGGAGCCTGCCCCCTGCCGCCGAAGCATTGTGTTGTGACAACCG
GAAAAATGCTGTCAACCATTGTTATTTGACTTCGATTGTCTTCTGATACG
CCACTGACCCCCGTTTTTATATTTCCGGCTATGTACGAGTTGTGTGTGTG
TGTGTGTCTGATACACCAAGGTTTGGCAGTCGCAATCCACACGCTCACCC
CGTTGGTTGTTGCGTTTATCTCATGCCGTCCTGTTCCCCCACGACGACCA
TGCCAGTACGCTTGTCCTATCCCCCCCGTACGAACAAATTCCACCGCCGT
GTCCTTACCTCTCGTTTTGCACACACACACACACACACTTGTATGTACTC
CATATTTCGGTCGTTTTAACGTTTGCTTGTTTATTTTCTTTTTATCGTTC
TGTGGTCGGGGGGCGGCAGAGCTCGATCACCCGTGCTTGGTGAAGCTTAT
CGAGGTGTTCAACTCGGCGGACGACGTGTTCATGGTGATGGAGGCCGTCG
ACGGCAGTGATCTGCACGAGGAGCTCCGGCAGCGGGGAAGGATGGAGGAG
GCCCGGGCGAGAGGCCTCTTCCAGCAGGTTTGCCCTCCTTTGTATGTAAC
CGTTTGTTAGCTTTCGAAGAGGAAATAGAAAAATGAAAGGCAAAATTTCC
CCCACATTTAGACACGGGGCTCCGTTCTATTGTATTTTATTCCTCGCTGA
TATTTGTTTTCGGCATGTATCGCTTTGTGACACCGCTTTTGCTCGTGTGT
GTGTGTGTGTGCGCGTGTTTAATGGTCCCGGGAAAACACCCACGTGGCAG
CTGATGACCGCGGTGCAGTACCTCCACTCGATCGGCGTCGCCCACCGCGA
CATCAAGCTAGAGAATGTGCTTCTCAGCAAGGATGGTGCGCGGGTATACT
TGGCCGACTTAGGGCTCGCCGCTCGGCTGGACGAATGGGAAGATAGCGGC
GACGGTGCTCAGGTGAGCATGCCCGATTGCAAGAGGAGGAGGAGATCGCA
CTTTGTTGCTGCTGTGTCCCCCCTCTCTTGAGGTGCCGTGCTCACGAAGC
GAGGATGCCGGCAAGGCTGGCTTTTATTCATCGAGTGTGCCCACGAAAAG
ACAGGAAGGTGTTGAAAATATGTGCCTGTGTTGTGTGTGTGTGTTGTGTC
CTGCGCACTTTTGTCTCGCACGGAAGCAAACTTTGGAGGCCTCGAGACGG
AAGGAAGGAATGCTGTAAACAAAAATTGCCGTGGCGTGCTTGCTCTCCAA
GCGTGTCCCAGGTTTTCTTGCGATGCGTATGTACATGGATGCCTGATGCG
CTCATGTGTTGTACATACATATAAGTATGTACTAAGTGCTGCCGTAGAGG
CCGAAGTTGAAAGCCTGACGCACTACTACTGTGCGTTCGTGTGTTGTATC
GCTGCCAACGACGGCGAAAGGGGAAGAAGGGACGCTTGTCGTTTAGATGG
AGCAGCAACAGGAGGGGCAGTCAGGGGCACCAGTCGTTGTCGTGCGGAAC
CCCCAGCTACGCCGCGCCCGAGATCATCGCGTCTTCCGACAAACACCGGT
GAGCGCATTCGTTGCATGCTCTCTCGCAAGGGGCAGGGTCGCATCGCGTC
GAGCCGCACCCCTGTCTGTCTGTCTGTCTGCCCACGACAGAATCCGCCCA
AGAGGTCTGGTGATCGATCGCATCATACTTTCCCATTGCTTGTATTATTC
CCGCGATAACACATATCAAGGCCCCATGGTCTCAAGCCAAGCGGTTCTAC
AAAAACAAATGAAGAAAGCTCAAGATTTACTGCCATATAGCGAGCCCGTC
GGGGGCGCGCGCGGAAAAGCAACTCCAAAAGCGCAATTCTATCCTACGAA
ACGCTCGTCTGTCTCCCCCGCCTTGAAAAACGCTCCTCACGAGGGCACGC
GCCTGACGATCTTAAATCTTCTCCGTGCCTGTCTGCGCCTCGCAACGATG
CGCCAGCTACGACGCCAGGGGCGTCGACACTTGGTCTGCGGGCGTGTGCC
TCTACGCGATGGCAACGGGCACCTTGCCGTTCGGGGCCGGCAGCGGCAGC
CTGTTAGACACGCTGAACGCCGTCCAGACGGCGGAGCCAGTTTTCCCCGA
GCACCTGTCCTCGCCGCTCGTGGTGAGAACACGCGGAACGGCGCGAACGA
AGGCAGTTTTGCTCCTTGCTTTCTGTCTCCGGCCGTGGTCGGGTGCTCCT
TTCGCGTGTGTGCCGCGTGGGGCGTTTGTTTCTTGGGAGAGAGAGCTCGG
ATGGTTGGTCGGTGCCTGCCTGTTTGTTTGCTTGTTTGTTTGTTTGTTTG
TTTTTTAATGCGTATTGTTTCTACAACACGCACGGTCAGCAGTCAGTCAG
TCCAGTCCGCATATGAACAAACGTGCAAGCATCCACATGTACATATGCAC
GTTTTTTCGTCTTTCGGTACATGACTTATCATGTGTGTGACCCCGGTTGG
GTCGTCTAGCTAGTCGGGGGCCAGTGGGGCAGATGACGAATGATCCAATA
ATGGGAGGAAAAAAACGAAAACAAAACATAAACAATGCGATAGTTCTGCC
CTCCTTGCCTGCTTCGAAAATAAGTATTGGTATGTACGTAGGCTTTAATA
CTAGAGGGTCGTCCCACTCCCGCTCAGACATACCATCGAAACCGTTTTCC
CTCTGCGAGCGGGGGGCCGGTTAAGAGCTATGCGAGACGTCCACCCTAGA
CGGACGGGAACTTTTGTCTGTTTTTCGAACGACCACCTTGTTGATCCGGT
CAGCGAGGCGAACGTGACCACTCGCTACTACTGACTGTTCAGCGAGGGCT
GGCTACATAAGGCGCGCACGTGGTCCGCACGCCCAAGAAGCCGAACGCCG
CGCGGGAACCAAACCAACCCTCCCGCTGCTGCCACCACCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCGCCGCNNNNNNNNNNCCAGAAGGGGCCGCCGGGGGCCCC
CCCCCCCAAGAGGCCCACCCCCCGCGGGAACCCAACCCCCCCCCCCCCCG
CCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTGCCCCGCACGCCGCGCT
CGTGTACACATGCATACCACAGGACTTGCTTCGGGGCATGCTACGCAAGG
ACCCGGCCAAGCGGATGACGGTGGCCGCTGTTCTGAGCAATCCCTGGACC
ACCACCCGGACGCCGGCCGTCGCCCCCGGCCGTGGAGCAGCAGCAGGCGC
AGGCGCAGGCGCAGACGCAGACAAGGCAGCAGGCTTGCCGGCGCGGAGTT
CGGCGAGTGCATCACACCAAATAGCGTGGCTGAGGGCGGCGGCGCCTCCG
GGCCGGCCTCACCGTAGCTCCTCCGACGCCCTCGACATCGTAGCGCCTCC
GGATCGGCAGCACCGTAGCACCTCCGACGCCGCCATCAGCACCGTAGCGC
CTCCGGAGCGGCAGCACCGTAGCACGTCCGACGCCATCAGCTCCGTAGCG
CCTCCGGGGCGGCAGTACCGCCGTAGCGCCTCCGACGCCATCAGCACCGT
AGCGCCTCCGGAACGGCAGCACCGTAGCACGTCCGACGCCATCAGCTCCG
TAGCGCCTCCGGGGCGGCAGTACCGCCGTAGCGCCTCCGACGCCATCAGC
ACCGTAGCGCCTCCGGAACGGCAGCACCATAGCTCCTCCGACACCATCGA
CTCCGGCGTAGTTCCTCCTTGCCGGCAGCTCTCCAGCCTCTCCAGCGCCC
TCAGGTCCGTAGCACGCCCGGGTCGGCAGCTCCGCAGCCTCTCCGAAGCC
CTCGGCTCCTCAGCTCCTCCGGCCGGCAGCTCCCTGGCCTCTCCAACGTC
CTCAGCCCCTTAGCAC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig2073:12603..17168-

>mRNA_L-elsbetiae_contig2073.6251.1 ID=mRNA_L-elsbetiae_contig2073.6251.1|Name=mRNA_L-elsbetiae_contig2073.6251.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2586bp|location=Sequence derived from alignment at L-elsbetiae_contig2073:12603..17168- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGATGGAGGCCGTCGACGGCAGTGATCTGCACGAGGAGCTCCGGCA
GCGGGGAAGGATGGAGGAGGCCCGGGCGAGAGGCCTCTTCCAGCAGATGG
TGATGGAGGCCGTCGACGGCAGTGATCTGCACGAGGAGCTCCGGCAGCGG
GGAAGGATGGAGGAGGCCCGGGCGAGAGGCCTCTTCCAGCAGCTGATGAC
CGCGGTGCAGTACCTCCACTCGATCGGCGTCGCCCACCGCGACATCAAGC
TAGAGAATGTGCTTCTCAGCAAGGATGGTGCGCGGGTATACTTGGCCGAC
TTAGGGCTCGCCGCTCGGCTGGACGAATGGGAAGATAGCGGCGACGGTGC
TCAGCTGATGACCGCGGTGCAGTACCTCCACTCGATCGGCGTCGCCCACC
GCGACATCAAGCTAGAGAATGTGCTTCTCAGCAAGGATGGTGCGCGGGTA
TACTTGGCCGACTTAGGGCTCGCCGCTCGGCTGGACGAATGGGAAGATAG
CGGCGACGGTGCTCAGGGGAAGAAGGGACGCTTGTCGTTTAGATGGAGCA
GCAACAGGAGGGGCAGTCAGGGGCACCAGTCGTTGTCGTGCGGAACCCCC
AGCTACGCCGCGCCCGAGATCATCGCGTCTTCCGACAAACACCGGGGAAG
AAGGGACGCTTGTCGTTTAGATGGAGCAGCAACAGGAGGGGCAGTCAGGG
GCACCAGTCGTTGTCGTGCGGAACCCCCAGCTACGCCGCGCCCGAGATCA
TCGCGTCTTCCGACAAACACCGCTACGACGCCAGGGGCGTCGACACTTGG
TCTGCGGGCGTGTGCCTCTACGCGATGGCAACGGGCACCTTGCCGTTCGG
GGCCGGCAGCGGCAGCCTGTTAGACACGCTGAACGCCGTCCAGACGGCGG
AGCCAGTTTTCCCCGAGCACCTGTCCTCGCCGCTCGTGCTACGACGCCAG
GGGCGTCGACACTTGGTCTGCGGGCGTGTGCCTCTACGCGATGGCAACGG
GCACCTTGCCGTTCGGGGCCGGCAGCGGCAGCCTGTTAGACACGCTGAAC
GCCGTCCAGACGGCGGAGCCAGTTTTCCCCGAGCACCTGTCCTCGCCGCT
CGTGGACTTGCTTCGGGGCATGCTACGCAAGGACCCGGCCAAGCGGATGA
CGGTGGCCGCTGTTCTGAGCAATCCCTGGACCACCACCCGGACGCCGGCC
GTCGCCCCCGGCCGTGGAGCAGCAGCAGGCGCAGGCGCAGGCGCAGACGC
AGACAAGGCAGCAGGCTTGCCGGCGCGGAGTTCGGCGAGTGCATCACACC
AAATAGCGTGGCTGAGGGCGGCGGCGCCTCCGGGCCGGCCTCACCGTAGC
TCCTCCGACGCCCTCGACATCGTAGCGCCTCCGGATCGGCAGCACCGTAG
CACCTCCGACGCCGCCATCAGCACCGTAGCGCCTCCGGAGCGGCAGCACC
GTAGCACGTCCGACGCCATCAGCTCCGTAGCGCCTCCGGGGCGGCAGTAC
CGCCGTAGCGCCTCCGACGCCATCAGCACCGTAGCGCCTCCGGAACGGCA
GCACCGTAGCACGTCCGACGCCATCAGCTCCGTAGCGCCTCCGGGGCGGC
AGTACCGCCGTAGCGCCTCCGACGCCATCAGCACCGTAGCGCCTCCGGAA
CGGCAGCACCATAGCTCCTCCGACACCATCGACTCCGGCGTAGTTCCTCC
TTGCCGGCAGCTCTCCAGCCTCTCCAGCGCCCTCAGGTCCGTAGCACGCC
CGGGTCGGCAGCTCCGCAGCCTCTCCGAAGCCCTCGGCTCCTCAGCTCCT
CCGGCCGGCAGCTCCCTGGCCTCTCCAACGTCCTCAGCCCCTTAGGACTT
GCTTCGGGGCATGCTACGCAAGGACCCGGCCAAGCGGATGACGGTGGCCG
CTGTTCTGAGCAATCCCTGGACCACCACCCGGACGCCGGCCGTCGCCCCC
GGCCGTGGAGCAGCAGCAGGCGCAGGCGCAGGCGCAGACGCAGACAAGGC
AGCAGGCTTGCCGGCGCGGAGTTCGGCGAGTGCATCACACCAAATAGCGT
GGCTGAGGGCGGCGGCGCCTCCGGGCCGGCCTCACCGTAGCTCCTCCGAC
GCCCTCGACATCGTAGCGCCTCCGGATCGGCAGCACCGTAGCACCTCCGA
CGCCGCCATCAGCACCGTAGCGCCTCCGGAGCGGCAGCACCGTAGCACGT
CCGACGCCATCAGCTCCGTAGCGCCTCCGGGGCGGCAGTACCGCCGTAGC
GCCTCCGACGCCATCAGCACCGTAGCGCCTCCGGAACGGCAGCACCGTAG
CACGTCCGACGCCATCAGCTCCGTAGCGCCTCCGGGGCGGCAGTACCGCC
GTAGCGCCTCCGACGCCATCAGCACCGTAGCGCCTCCGGAACGGCAGCAC
CATAGCTCCTCCGACACCATCGACTCCGGCGTAGTTCCTCCTTGCCGGCA
GCTCTCCAGCCTCTCCAGCGCCCTCAGGTCCGTAGCACGCCCGGGTCGGC
AGCTCCGCAGCCTCTCCGAAGCCCTCGGCTCCTCAGCTCCTCCGGCCGGC
AGCTCCCTGGCCTCTCCAACGTCCTCAGCCCCTTAG
back to top