mRNA_L-elsbetiae_contig2071.6243.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2071.6243.1
Unique NamemRNA_L-elsbetiae_contig2071.6243.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig2071.6243.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 3.380e-43
Identity = 154/430 (35.81%), Postives = 199/430 (46.28%), Query Frame = 1
Query:    1 NELHEIIRCGSIEQTIALLSKGSINIDEVDSAGTTPLMFAAMRGHSHIARILLSRGADLSIAAEGGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVDSR-RGNAGXXXXXXXXXXXXXXXXXXXXXXGANPLLDATS--SGVTFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAQRHVGVMEMLTDAGVVDTGRALILAAGMGGEAEVKVLLQQRQLEGSPTSLDGYINSHDRSGCTALFRSIKGSEKTALKQLMSPRVVRLLVDAGADTTSVVRVT---GGPLLCFCGTPLAYINNCLREK-KANGLGLTEQQLHRLAAARRLLLWVEAVRAASWLWHVDAPTTQRARHVTSRAKTASTPLGMMLPILRRRAKRRGLVTAPLFRHSVK 1269
            N+LH  +  GS E T A+L+ G++ ID+ +S G TPLM A   GHS IA++L+ +GA++SIA + G                                              XXXXXXXXXXX  +   +   G                       ANPLL  TS     T +                                      A + +H+ +M +LT+AGVVDTG+AL LAAGMG EA VK LL+ R  EG       Y+N+ D +G T L    +G    A      PR+VR+LVDAGADTTS V+V    GG  + F  TPLA+    LR+K  A+G   T++ L RL A  RLLL V+AV A SWLW   AP   RA          +  L +MLPIL+RR KRR  + A L R+SVK
Sbjct:  107 NQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQA------PRIVRMLVDAGADTTSPVQVMNLKGG--VVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPPLPA--LKLMLPILKRRTKRRCGLVATLLRYSVK 526          
BLAST of mRNA_L-elsbetiae_contig2071.6243.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 3.690e-41
Identity = 193/431 (44.78%), Postives = 234/431 (54.29%), Query Frame = 1
Query:    1 NELHEIIRCGSIEQTIALLSKGSINIDEVDSAGTTPLMFAAMRGHSHIARILLSRGADLSIAAEGGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVDSRRGNAGXXXXXXXXXXXXXXXXXXXXXXGANPLLDATSSGVTFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAQRHVGVMEMLTDAGVVDTGRALILAAGMGGEAEVKVLLQQRQLEGSPTSLDGYINSHDRSGCTALFRSIK--GSEKTALKQLMSPRVVRLLVDAGADTTSVVRVTG--GPLLCFCGTPLAYINNCLREKKANGLGLTEQQLHRLAAARRLLLWVEAVRAASWLWHVDAPTTQR----ARHVTSRAKTASTPLGMMLPILRRRAKRRGLVTAPLFRHSVK 1269
            N LH+    GS E+T  LL+ GS +I++      TPL+FAA  GHS +  ILLS+GA++SI  + G      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VD R    G                       ANPL+       T L                                      A   R V  M +LT AGVVDTG+AL ++AG+G EA VK LLQ       P +   Y+N  DR+G T L  SI   G ++    Q   PRV RLLV+AGADTT+ +R T   G +L  C TPL    + L++KK +G  +++Q+L RL   RRLLL VEAV A SWLW   +    R    A  VT+    A+  LG +LPILRRRA+R G+V   L RH  K
Sbjct:    2 NSLHDAAFKGSTERTAELLATGSWDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPLP-TLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPGA---YVNVRDRNGTTPLLSSIYVCGVDE----QSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSC-TPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRK 423          
BLAST of mRNA_L-elsbetiae_contig2071.6243.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 1.270e-39
Identity = 102/212 (48.11%), Postives = 127/212 (59.91%), Query Frame = 1
Query:  640 RHVGVMEMLTDAGVVDT-GRALILAAGMGGEAEVKVLLQQRQLEGSPTSLDGYINSHDRSGCTALFRSIKGSEKTALKQLMSPRVVRLLVDAGADTTSVVRVT---GGPLLCFCGTPLAYINNCLREKKANGLGLTEQQLHRLAAARRLLLWVEAVRAASWLWHVDAPTTQRARHVTSRAKTASTPLGMMLPILRRRAKRRGLVTAPLFRHS 1263
            +H+ +M +LT AGV D  G  L+  AG+G EA V+ LL+QR+ E S  S+  Y NS D SG T L  SI+           +PR+VRLLVDAGADTTS VRVT   GG  + +  TPLA   + LREK  +G   TE+QLHRL A RRLLL V+AV A SWLW  DAP+   A   +   +    PL + LPIL+RRAK   +  A L R S
Sbjct:    3 QHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKE-SEMSVHAYANSSDGSGMTPLSCSIEWCSSG------NPRIVRLLVDAGADTTSTVRVTNLNGG--VEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLRSS 205          
BLAST of mRNA_L-elsbetiae_contig2071.6243.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 7.100e-38
Identity = 203/436 (46.56%), Postives = 236/436 (54.13%), Query Frame = 1
Query:    1 NELHEIIRCGSIEQTIALLSKGSINIDEVDSAGTTPLMFAAMRGHSHIARILLSRGADLSIAAEGGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVDSRRGNAGXXXXXXXXXXXXXXXXXXXXXXGANPLLDATSSGVTFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAQRHVGVMEMLTDAGVVDTGRALILAAGMGGEAEVKVLLQQRQLEGSPTSLDGYINS-HDRSGCTALFRSIKGSEKTALKQLMSPRVVRLLVDAGADTTSVVRVT--GGPLLCFCGTPLAYINNCLREKKANGLGLTEQQLHRLAAARRLLLWVEAVRAASWLWH-----VDAPTTQRARHVTSRAKTASTPLGMMLPILRRRAKRRGLVTAPLFRHSVKIGQDP 1284
            N+LHE  R GS   T A+LS GSI+ID  DS+G TPLM A    H  +  ILLS+GA +S   + G+             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXX    ANPLL   +     L                                      A  + H+ VM  LT AGVVDTG AL+ A   G    VK LLQQ+   G+P+    Y++   D  G T L  +I       L Q  SP+VVRLLVDAGADTTS+VR T   G L   C TPL+     LR K A    + ++ L RL   RRLLL VEAV A SWLW      V  P    A   T  + T +  L  +LPILRRRA+ RG V+A L R++VK+   P
Sbjct:   16 NKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAK-ANPLLTRVNLAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQN--GTPSEKSAYVSRPRDPCGRTPLICNID----VGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVC-TPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVKLDGKP 443          
BLAST of mRNA_L-elsbetiae_contig2071.6243.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 2.950e-35
Identity = 177/431 (41.07%), Postives = 223/431 (51.74%), Query Frame = 1
Query:    1 NELHEIIRCGSIEQTIALLSKGSINIDEVDSAGTTPLMFAAMRGHSHIARILLSRGADLSIAAEGGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVDSRRGNAGXXXXXXXXXXXXXXXXXXXXXXGANPLLDATS--SGVTFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAQRHVGVMEMLTDAGVVDTGRALILAAGMGGEAEVKVLLQQRQLEGSPTSLDGYINSHDRSGCTALFRSIKGSEKTALKQLMSPRVVRLLVDAGADTTSVVRVT---GGPLLCFCGTPLAYINNCLREK-KANGLG-LTEQQLHRLAAARRLLLWVEAVRAASWLWHVDAPT-TQRARHVTSRAKTASTPLGMMLPILRRRAKRRGLVTAPLFRHSVK 1269
            N LH    CGS E T  +L+ G+ +ID+ +  G T LM A+  G++ I  ++L++GA +SI      XXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXX   + R + G                       A+PLL      SG TFL                                      A   +++ +M +LT+AGVVDTG AL++AAG GGE  +K LL+Q +   +      Y+N+ DR G T L   I         Q   PRVVRLLV+AGADTTS V V    GG  +    TPL    N +R+K K  G G  + +QLH+L A RRLLL VEAV A SWLW  D  T T+ A   T R    ST + + + + RRRA+ R +  A L R+S K
Sbjct:   16 NRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEA-AYVNTRDRGGVTPLLWGI---------QHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSI--TPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSK 434          
BLAST of mRNA_L-elsbetiae_contig2071.6243.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 8.700e-33
Identity = 209/430 (48.60%), Postives = 245/430 (56.98%), Query Frame = 1
Query:    1 NELHEIIRCGSIEQTIALLSKGSINIDEVDSAGTTPLMFAAMRGHSHIARILLSRGADLSIAAEGGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVDSRRGNAGXXXXXXXXXXXXXXXXXXXXXXGANPLLDAT-SSGVTFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAQRHVGVMEMLTDAGVVDTGRALILAAGMGGEAEVKVLLQQRQLEGSPTSLDGYINS-HDRSGCTALFRSIKGSEKTALKQLMSPRVVRLLVDAGADTTSVVRVTGGPLLCFCGTPLAYINNCLREKKANGLGLTEQQLHRLAAARRLLLWVEAVRAASWLW--HVDAPTTQRARHVTSRAKTAST---PLGMMLPILRRRAKRRGLVTAPLFRHSVK 1269
            NELH+    GS ++T +LL+ G I+ID+ D  G TPLMFAA  GHS++ ++LL+RGA L +  +    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXX   PLL    SSG TF+                                      A   +H+ VM +L DAGVVDTG AL+    +G E  +K LL+Q+   G  T+   Y ++  D  G T L  ++            SPRVVRLLVDAGAD T  VRV  G       TPL     CL EK  +    T QQL  L A+RRLLL VE V A SWLW  H   P     +    RA+T ST   PL   LPI+ RR+ RRG     +FR + K
Sbjct:   13 NELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASL-LPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQK---GEGTARTTYASTPRDGRGHTPLLSAVTTGP-------CSPRVVRLLVDAGADATLAVRVPDGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKK----RAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFRLAKK 427          
BLAST of mRNA_L-elsbetiae_contig2071.6243.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 2.290e-29
Identity = 88/220 (40.00%), Postives = 122/220 (55.45%), Query Frame = 1
Query:  628 ATAQRHVGVMEMLTDAGVVDTGRALILAAGMGGEAEVKVLLQQRQLEGSPTSLDGYINSHDRSGCTALFRSIKGSEKTALKQLMSPRVVRLLVDAGADTTSVVRVTGGP-LLCFCGTPLAYINNCLREKKANGLGLTEQQLHRLAAARRLLLWVEAVRAASWLWHVDAPTT-----QRARHVTSRAKTASTPLGMMLPILRRRAKRRGLVTAPLFRHSVK 1269
            A   +   ++ ML D G +DTGR LI AA  G EA VK+LLQQ++  G     D Y+N     G T +   I  + ++      SPRV+RL +DAGADT S VR+T    +  F GTPLAY    LR+++A G+  T+ +   L A RR+LL +EA+RA SW W  DA ++     Q  R       T  TPLG+ LP  RR+A+ R ++   + R+S K
Sbjct:  387 AVQTQQYDIVVMLADTGEIDTGRVLIDAAKFGSEALVKILLQQQR--GKHMDWDTYVNKKQPDGRTPVVCRIGRALRSG-----SPRVLRLFLDAGADTASTVRITNKEGVQLFRGTPLAYTTWLLRDQQARGIDSTKGEPCSLEAVRRMLLQLEAIRAVSWCWQSDALSSIERAVQDGRPRAKSRLTVDTPLGLTLP-RRRKARARRVLVMAMSRYSRK 598          
BLAST of mRNA_L-elsbetiae_contig2071.6243.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 3.600e-29
Identity = 206/428 (48.13%), Postives = 245/428 (57.24%), Query Frame = 1
Query:    1 NELHEIIRCGSIEQTIALLS-KGSINIDEVDSAGTTPLMFAAMRGHSHIARILLSRGADLSIAAEGGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVDSRRGNAGXXXXXXXXXXXXXXXXXXXXXXGANPLLD---ATSSGVTFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAQRHVGVMEMLTDAGVVDTGRALILAAGMGGEAEVKVLLQQRQLEGSPTSLDGYINSHDRSGCTALFRSIKGSEKTALKQLMSPRVVRLLVDAGADTTSVVRVTGGPLLCFCGTPLAYINNCLR-EKKANGLGLTEQQLHRLAAARRLLLWVEAVRAASWLWHVDAPTTQRARHVTSRAKTASTPLGMMLPILRRRAKRRGLVTAPLFRHSVK 1269
            NELH     GS E+ +ALLS +  I++++ DSAG TPLM A   GH  + RILL+ GA++SI  + G    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXXXX A+PLL     ++ GV FL     XXXXX                            A   RHVG++ ML  AGVVD G AL  AA  G EA VK LL+Q + + S  S   Y+N  +R G T L  +I     +A       R+VRLLVDAGADTT+  R+TG        T       CL  EKKA G   T ++ H L A  RLLL VEA  A SW+W   + +  R      R + A  P+ + LP+ RR    R  +   + R+S K
Sbjct:   16 NELHLAAMDGSAERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIMDDVGSDALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXNADPLLGNVLPSTGGVCFLPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQHEGKHS-ASRSAYVNKLNRFGLTPLLENITCGHCSA-------RIVRLLVDAGADTTAAYRLTGKKGQAMAATTHLTAMGCLLLEKKAKGD--TGEEPHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPPR---RQRRAEAPVRLTLPMTRRDTGTRRALLGAVSRYSEK 429          
BLAST of mRNA_L-elsbetiae_contig2071.6243.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 7.610e-29
Identity = 164/372 (44.09%), Postives = 193/372 (51.88%), Query Frame = 1
Query:    1 NELHEIIRCGSIEQTIALL-SKGSINIDEVDSAGTTPLMFAAMRGHSHIARILLSRGADLSIAAEGGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVDSRRGNAGXXXXXXXXXXXXXXXXXXXXXXGANPLLDA-TSSGVTFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAQRHVGVMEMLTDAGVVDTGRALILAAGMGGEAEVKVLLQQRQLEGSPTSLDGYIN-SHDRSGCTALFRSIKGSEKTALKQLMSPRVVRLLVDAGADTTSVVRVTG-GPLLCFCGTPLAYINNCLREKKANGLGLTEQQLHRLAAARRLLLWVEAVRAA 1104
            N+LH     GS+E+ +ALL S+ SI ID     G TPLM AA RG S + RILL++GA++S+ AE GH                XXXXXXXXXXXXXXXXXXXXXX             XXXXX          XXXXXXXXXXXXXXXXXXXX   ANPLL   T SGVTF+                                      A   ++V VM +L DAGV+DTG ALI AAG   EA VK+LLQQR    +   L  Y+N +HD  G T L  SI G          SPRVVRLLVDAGADT S V + G    +    TP+ +    L E    G    E+ +H+L A  RL   VEA R++
Sbjct:   17 NDLHRAANDGSVERVVALLASRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFR---CSPRVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDGGKTAMEKHVHKLRAIHRLFSQVEAERSS 385          
BLAST of mRNA_L-elsbetiae_contig2071.6243.1 vs. uniprot
Match: D7FYA6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA6_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 7.900e-28
Identity = 87/221 (39.37%), Postives = 119/221 (53.85%), Query Frame = 1
Query:  628 ATAQRHVGVMEMLTDAGVVDTGRALILAAGMGGEAEVKVLLQQRQLEGSPTSLDGYINSHDRSGCTALFRSIKGSEKTALKQLMSPRVVRLLVDAGADTTSVVRVTGGP-LLCFCGTPLAYINNCLREKKANGLGLTEQQLHRLAAARRLLLWVEAVRAASWLWHVDA--PTTQRARHVTSRAK---TASTPLGMMLPILRRRAKRRGLVTAPLFRHSVKI 1272
            A   +   ++ ML DAGV+DTGR LI A   G EA VK+LLQQ++ +      + Y+N     G T +  SI  +  +      SPRV+RL +DAGADT S VR+     +  F GTPLAY    LR+++A  +  T+ Q   L A  R+LL +EA+RA SW W  DA  P  +     T RAK   T   PLG+ LP  RRRA+   ++   + R  V +
Sbjct:  359 AVRTQQYDIVVMLADAGVIDTGRVLIDATKFGSEASVKILLQQQRWK--HMDWNTYVNKKHPDGRTPVVCSIGRALLSG-----SPRVLRLFLDAGADTASTVRIANKEGVEVFSGTPLAYTTWLLRDQQAQAIDSTKGQPCGLKAVCRMLLQLEAIRAVSWCWQSDASSPIERAVMDGTPRAKSKLTTDPPLGLTLPRTRRRARAHRVLVMAISRPMVCV 572          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2071.6243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT11_ECTSI3.380e-4335.81EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LJF9_ECTSI3.690e-4144.78EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LSC5_ECTSI1.270e-3948.11EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FVK3_ECTSI7.100e-3846.56EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KJA9_9PHAE2.950e-3541.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL76_ECTSI8.700e-3348.60EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KSA9_9PHAE2.290e-2940.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FY91_ECTSI3.600e-2948.13EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
A0A6H5JL33_9PHAE7.610e-2944.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYA6_ECTSI7.900e-2839.37Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2071contigL-elsbetiae_contig2071:19315..21357 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score154.5
Seed ortholog evalue1.1e-34
Seed eggNOG ortholog2880.D7FT11
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1354
Cds size1209
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2071.6243.1prot_L-elsbetiae_contig2071.6243.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2071 19349..21246 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815851.508141-UTR-L-elsbetiae_contig2071:19314..193481622815851.508141-UTR-L-elsbetiae_contig2071:19314..19348Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2071 19315..19348 -
1691683146.0572927-UTR-L-elsbetiae_contig2071:19314..193481691683146.0572927-UTR-L-elsbetiae_contig2071:19314..19348Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2071 19315..19348 -
1622815851.544656-UTR-L-elsbetiae_contig2071:21246..213571622815851.544656-UTR-L-elsbetiae_contig2071:21246..21357Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2071 21247..21357 -
1691683146.0849495-UTR-L-elsbetiae_contig2071:21246..213571691683146.0849495-UTR-L-elsbetiae_contig2071:21246..21357Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2071 21247..21357 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815851.5220575-CDS-L-elsbetiae_contig2071:19348..194121622815851.5220575-CDS-L-elsbetiae_contig2071:19348..19412Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2071 19349..19412 -
1691683146.0678186-CDS-L-elsbetiae_contig2071:19348..194121691683146.0678186-CDS-L-elsbetiae_contig2071:19348..19412Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2071 19349..19412 -
1622815851.534788-CDS-L-elsbetiae_contig2071:20101..212461622815851.534788-CDS-L-elsbetiae_contig2071:20101..21246Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2071 20102..21246 -
1691683146.0763996-CDS-L-elsbetiae_contig2071:20101..212461691683146.0763996-CDS-L-elsbetiae_contig2071:20101..21246Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2071 20102..21246 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2071.6243.1

>prot_L-elsbetiae_contig2071.6243.1 ID=prot_L-elsbetiae_contig2071.6243.1|Name=mRNA_L-elsbetiae_contig2071.6243.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=403bp
MFAAMRGHSHIARILLSRGADLSIAAEGGHTALHISVQEGHLAVTTDLVK
AGADLEARIFTGATPLHLAAQEGNSEVMAALIEAGAIVDSRRGNAGSTPL
SLAAGRGRLNAVKELLRAGANPLLDATSSGVTFLPLEIAARHGHSEVVRE
LIQQVGIEGCAGVSSGVDALEAATAQRHVGVMEMLTDAGVVDTGRALILA
AGMGGEAEVKVLLQQRQLEGSPTSLDGYINSHDRSGCTALFRSIKGSEKT
ALKQLMSPRVVRLLVDAGADTTSVVRVTGGPLLCFCGTPLAYINNCLREK
KANGLGLTEQQLHRLAAARRLLLWVEAVRAASWLWHVDAPTTQRARHVTS
RAKTASTPLGMMLPILRRRAKRRGLVTAPLFRHSVKIGQDPDGEDGDDSA
AV*
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mRNA from alignment at L-elsbetiae_contig2071:19315..21357-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2071.6243.1 ID=mRNA_L-elsbetiae_contig2071.6243.1|Name=mRNA_L-elsbetiae_contig2071.6243.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2043bp|location=Sequence derived from alignment at L-elsbetiae_contig2071:19315..21357- (Laminarionema elsbetiae ELsaHSoW15)
AATGAACTGCACGAGATCATCCGCTGCGGTTCCATCGAGCAAACGATAGC CCTGCTCTCGAAGGGATCGATCAATATCGACGAGGTTGATTCAGCTGGCA CCACTCCCCTCATGTTCGCCGCAATGCGGGGTCACTCGCACATTGCCAGG ATCCTGCTAAGCAGGGGGGCCGACTTGTCGATAGCGGCGGAGGGCGGTCA CACTGCTCTTCACATTTCCGTTCAAGAAGGACACCTTGCCGTCACCACTG ACCTGGTGAAGGCCGGCGCAGACCTGGAGGCAAGGATCTTCACCGGCGCC ACACCGCTTCACCTGGCTGCGCAGGAAGGGAACTCAGAGGTGATGGCAGC ACTGATAGAGGCAGGTGCGATTGTCGACAGCCGCCGTGGGAATGCTGGGT CAACGCCGCTCTCTTTAGCTGCCGGGAGGGGACGTTTGAACGCCGTCAAA GAGCTCTTGCGTGCGGGAGCCAACCCGCTGTTGGACGCGACTTCATCAGG GGTAACTTTTCTGCCGCTGGAGATCGCGGCCAGACACGGGCACTCTGAGG TGGTACGCGAGCTGATCCAGCAAGTCGGGATCGAAGGCTGTGCTGGTGTA AGCAGCGGTGTAGACGCCCTCGAAGCCGCCACAGCGCAGCGGCATGTGGG CGTCATGGAAATGCTGACCGACGCTGGAGTGGTCGATACAGGACGAGCAC TGATCTTGGCGGCCGGGATGGGAGGGGAGGCGGAAGTAAAGGTCCTGTTA CAGCAGCGGCAGCTAGAGGGGTCCCCGACCAGCTTAGACGGATACATCAA CTCCCACGATCGCAGCGGCTGCACGGCCTTGTTTCGTAGTATTAAAGGTT CCGAAAAGACAGCGCTAAAACAGTTAATGTCGCCCAGGGTGGTGCGGTTG CTTGTCGACGCCGGAGCAGACACGACGTCGGTTGTTCGCGTCACGGGGGG ACCCTTGCTTTGCTTCTGCGGCACTCCGCTGGCTTACATCAACAACTGTC TCCGCGAGAAGAAAGCAAATGGATTGGGCCTGACAGAGCAGCAGCTGCAT CGGCTCGCTGCCGCCCGCCGCCTGCTGTTGTGGGTAGAAGCAGTGCGCGC CGCCTCTTGGCTGTGGCACGTCGATGCCCCCACTACCCAGCGTGCCAGAC ATGTTACAAGCAGGGCGAAGACGGCCTCGACTCCGCTGGGGATGATGCTG CCGATCTTGAGGCGACGAGCCAAGAGGCGTGGGCTGGTCACGGCGCCCCT GTTCAGGTTGGCCGTTGTTGTTGTTGTTTTGTTTGTTTTTTTTCCCTCCC ATTACTATTTAGCATATTCGTCGTCTTCCCCACTGGCCCCCATACTCCAC TACGACTATGTGGCTAGACGACCCAACCGGGGTCACACAGGAGGGGGGGG GGGGGGGTGGACCCCCTCCTACGGTGCCTGCCTGCTATGTTTGTGAAGTG TGGGCCGTTTACCGTAGTAGTATTAGATACTGTATTGTACGGATTGTGTG ATTTGTTGGCATATTCGTCACCGCGAGTGCTTGGTATCGGGGGTTCGATG TGGCGGGCGTGTCCCTGCCCCCGCTTTCCTCGGCCCTCTAGCGTTTCGGC TCGCAACCTATGTACATGCATACGCGGCGGCAACGCCATATGTATGCCTG TCTGGTGTCAACAGAGTCGTTCGTTGCAGTTTTCGCTTACGCTGAACAAT CTTCTTCTTTGGGGTTGAAGGAATACGTTGTATGTACTTCCATGCATGCA TGTACTGTTGTATGTAGTAGCAGACCAGCGACAACAAACGGGATTCCATC ATGTTTTCGTGTTTGCTGATGGAAAATATGGCTGCCGCAGAAGCCTCCAT CCACCCTCAAGCTCGCTGCGGCCGTTCGCTCGCTGTTTGGCGCGTGTCCG CTCTATTCGTCTTTCTGTACCACCATTGGTCTTCATGTTTTCCAGGCATT CGGTGAAAATTGGACAGGACCCTGACGGTGAAGACGGTGACGATTCTGCT GCCGTTTAATGCCGCCTTCAGAAGGAGTGACCGACGTGTGGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig2071:19315..21357-

>mRNA_L-elsbetiae_contig2071.6243.1 ID=mRNA_L-elsbetiae_contig2071.6243.1|Name=mRNA_L-elsbetiae_contig2071.6243.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2418bp|location=Sequence derived from alignment at L-elsbetiae_contig2071:19315..21357- (Laminarionema elsbetiae ELsaHSoW15)
ATGTTCGCCGCAATGCGGGGTCACTCGCACATTGCCAGGATCCTGCTAAG
CAGGGGGGCCGACTTGTCGATAGCGGCGGAGGGCGGTCACACTGCTCTTC
ACATTTCCGTTCAAGAAGGACACCTTGCCGTCACCACTGACCTGGTGAAG
GCCGGCGCAGACCTGGAGGCAAGGATCTTCACCGGCGCCACACCGCTTCA
CCTGGCTGCGCAGGAAGGGAACTCAGAGGTGATGGCAGCACTGATAGAGG
CAGGTGCGATTGTCGACAGCCGCCGTGGGAATGCTGGGTCAACGCCGCTC
TCTTTAGCTGCCGGGAGGGGACGTTTGAACGCCGTCAAAGAGCTCTTGCG
TGCGGGAGCCAACCCGCTGTTGGACGCGACTTCATCAGGGGTAACTTTTC
TGCCGCTGGAGATCGCGGCCAGACACGGGCACTCTGAGGTGGTACGCGAG
CTGATCCAGCAAGTCGGGATCGAAGGCTGTGCTGGTGTAAGCAGCGGTGT
AGACGCCCTCGAAGCCGCCACAGCGCAGCGGCATGTGGGCGTCATGGAAA
TGCTGACCGACGCTGGAGTGGTCGATACAGGACGAGCACTGATCTTGGCG
GCCGGGATGGGAGGGGAGGCGGAAGTAAAGGTCCTGTTACAGCAGCGGCA
GCTAGAGGGGTCCCCGACCAGCTTAGACGGATACATCAACTCCCACGATC
GCAGCGGCTGCACGGCCTTGTTTCGTAGTATTAAAGGTTCCGAAAAGACA
GCGCTAAAACAGTTAATGTCGCCCAGGGTGGTGCGGTTGCTTGTCGACGC
CGGAGCAGACACGACGTCGGTTGTTCGCGTCACGGGGGGACCCTTGCTTT
GCTTCTGCGGCACTCCGCTGGCTTACATCAACAACTGTCTCCGCGAGAAG
AAAGCAAATGGATTGGGCCTGACAGAGCAGCAGCTGCATCGGCTCGCTGC
CGCCCGCCGCCTGCTGTTGTGGGTAGAAGCAGTGCGCGCCGCCTCTTGGC
TGTGGCACGTCGATGCCCCCACTACCCAGCGTGCCAGACATGTTACAAGC
AGGGCGAAGACGGCCTCGACTCCGCTGGGGATGATGCTGCCGATCTTGAG
GCGACGAGCCAAGAGGCGTGGGCTGGTCACGGCGCCCCTGTTCAGATGTT
CGCCGCAATGCGGGGTCACTCGCACATTGCCAGGATCCTGCTAAGCAGGG
GGGCCGACTTGTCGATAGCGGCGGAGGGCGGTCACACTGCTCTTCACATT
TCCGTTCAAGAAGGACACCTTGCCGTCACCACTGACCTGGTGAAGGCCGG
CGCAGACCTGGAGGCAAGGATCTTCACCGGCGCCACACCGCTTCACCTGG
CTGCGCAGGAAGGGAACTCAGAGGTGATGGCAGCACTGATAGAGGCAGGT
GCGATTGTCGACAGCCGCCGTGGGAATGCTGGGTCAACGCCGCTCTCTTT
AGCTGCCGGGAGGGGACGTTTGAACGCCGTCAAAGAGCTCTTGCGTGCGG
GAGCCAACCCGCTGTTGGACGCGACTTCATCAGGGGTAACTTTTCTGCCG
CTGGAGATCGCGGCCAGACACGGGCACTCTGAGGTGGTACGCGAGCTGAT
CCAGCAAGTCGGGATCGAAGGCTGTGCTGGTGTAAGCAGCGGTGTAGACG
CCCTCGAAGCCGCCACAGCGCAGCGGCATGTGGGCGTCATGGAAATGCTG
ACCGACGCTGGAGTGGTCGATACAGGACGAGCACTGATCTTGGCGGCCGG
GATGGGAGGGGAGGCGGAAGTAAAGGTCCTGTTACAGCAGCGGCAGCTAG
AGGGGTCCCCGACCAGCTTAGACGGATACATCAACTCCCACGATCGCAGC
GGCTGCACGGCCTTGTTTCGTAGTATTAAAGGTTCCGAAAAGACAGCGCT
AAAACAGTTAATGTCGCCCAGGGTGGTGCGGTTGCTTGTCGACGCCGGAG
CAGACACGACGTCGGTTGTTCGCGTCACGGGGGGACCCTTGCTTTGCTTC
TGCGGCACTCCGCTGGCTTACATCAACAACTGTCTCCGCGAGAAGAAAGC
AAATGGATTGGGCCTGACAGAGCAGCAGCTGCATCGGCTCGCTGCCGCCC
GCCGCCTGCTGTTGTGGGTAGAAGCAGTGCGCGCCGCCTCTTGGCTGTGG
CACGTCGATGCCCCCACTACCCAGCGTGCCAGACATGTTACAAGCAGGGC
GAAGACGGCCTCGACTCCGCTGGGGATGATGCTGCCGATCTTGAGGCGAC
GAGCCAAGAGGCGTGGGCTGGTCACGGCGCCCCTGTTCAGGCATTCGGTG
AAAATTGGACAGGACCCTGACGGTGAAGACGGTGACGATTCTGCTGCCGT
TTAAGCATTCGGTGAAAATTGGACAGGACCCTGACGGTGAAGACGGTGAC
GATTCTGCTGCCGTTTAA
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