mRNA_L-elsbetiae_contig207.6237.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig207.6237.1
Unique NamemRNA_L-elsbetiae_contig207.6237.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig207.6237.1 vs. uniprot
Match: A0A6H5JYK5_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYK5_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 5.250e-88
Identity = 215/263 (81.75%), Postives = 220/263 (83.65%), Query Frame = 1 
Query:   19 MGRGRGKGKRGGRGGGGRQHFVSSLEELESRNDRDEAWEARRKAERLANGESSEDEDGEDKKKGGAXXXXXXXXXXXXXXARGGAAAEEV--VMEKKQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPQKLNPLEVKKMNPTRLKELLKERDESLQGSKKDLISRLLAWEKNNQT 801
            MGRGRGKGKRGGRGGGGRQHFVSSLEELESRNDRDEAW ARRKAER  +GES              XXXXXXXXXXXXXX             +E KQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRRE+EAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREE      XXXXXXXXXXXXXXXXXXXXX     GPQKLNPLEVKKMNPTRLKELLKERDESLQGSKKDLI+RLLAWEK NQ+
Sbjct:    1 MGRGRGKGKRGGRGGGGRQHFVSSLEELESRNDRDEAWAARRKAEREDSGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVEMKQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREKEAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEAEARKAXXXXXXXXXXXXXXXXXXXXXAGSG-GPQKLNPLEVKKMNPTRLKELLKERDESLQGSKKDLIARLLAWEKTNQS 262
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BLAST of mRNA_L-elsbetiae_contig207.6237.1 vs. uniprot
Match: D7FHS2_ECTSI (Similar to PDGF associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS2_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 1.830e-66
Identity = 157/167 (94.01%), Postives = 159/167 (95.21%), Query Frame = 1 
Query:  301 KQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPQKLNPLEVKKMNPTRLKELLKERDESLQGSKKDLISRLLAWEKNNQT 801
            KQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREE    XXXXXXXXXXXXXXXXXXXXXXXXXX  GPQKLNPLEVKKMNPTRLKELLKERDESL GSKKDLI+RLLAWEK NQ+
Sbjct:    2 KQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEAEARXXXXXXXXXXXXXXXXXXXXXXXXXXG-GPQKLNPLEVKKMNPTRLKELLKERDESLHGSKKDLIARLLAWEKTNQS 167
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BLAST of mRNA_L-elsbetiae_contig207.6237.1 vs. uniprot
Match: A0A7S2SP28_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP28_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 3.310e-19
Identity = 78/180 (43.33%), Postives = 97/180 (53.89%), Query Frame = 1 
Query:  274 AAEEVVMEKKQPKAKGVSSLIEVANPN-AKPKAGRMMKAKDMDMAAAPVE----------LSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPQKLNPLEVKKMNPTRLKELLKERDESLQGSKKDLISRLLA 780
            AAEE   E +QPK KG + +I  ANPN  KP   R +K KD+   AA  E          L+RR+RE +EAQRKK+ Y +LHA+GKT E + DM RL   RKRREE                                  +KL+P E+KKMNP +LK+ LK R  S QG KKDL++RLLA
Sbjct:   82 AAEESDEEGRQPKPKGPAGVIATANPNDVKP---RNIKIKDLGKLAAAEEGSAGGNPEERLTRRQREELEAQRKKEAYQRLHAQGKTDEYKKDMERLQEARKRREEAEQKSKDNEDARAAEEKAARKAAVDVDEDEEDV-EKLDPREIKKMNPKQLKDQLKSRGLSTQGQKKDLMARLLA 257
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BLAST of mRNA_L-elsbetiae_contig207.6237.1 vs. uniprot
Match: A0A484E654_BRELC (SAP domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E654_BRELC)

HSP 1 Score: 95.9 bits (237), Expect = 2.050e-18
Identity = 96/242 (39.67%), Postives = 136/242 (56.20%), Query Frame = 1 
Query:   64 GGRQHFVSSLEELESRNDRDEAWEARRKAERLANGESSE-DEDGEDKKKGGAXXXXXXXXXXXXXXARGGAAAEEVVMEKKQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPQKLNPLEVKKMNPTRLKELLKERDESLQGSKKDLISRLLAWE 786
            GG ++FV+SLEE++ R   DE  E +RKA  +   + S+ DED    ++G                    A    +  E K+    G +++ +  NPN+K  A ++MKAKDMD  AAP ELSRREREA+E +R   +Y+K H  G+T+EA+ D+ARLA V++R   XXXXXXXXXXXXX                     + L+   +K + P  LK+ LKERD S+QG KK+L+ RL+ +E
Sbjct:   25 GGTRNFVTSLEEMKLR---DEQEEEKRKARGVVTEQGSDADEDESSNEEGEELVAFERVQTKSLFGFHTTANGPTLQPETKKV---GFAAVAKAQNPNSKKTANKVMKAKDMDANAAPQELSRREREALEKERSAAYYLKKHLAGETEEAKKDLARLAEVKRRXXXXXXXXXXXXXXXXERDMGKKKVTAKNDD------EPLDARAIKALKPAVLKDKLKERDLSIQGQKKELVQRLIDYE 254
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BLAST of mRNA_L-elsbetiae_contig207.6237.1 vs. uniprot
Match: A0A7S2BBI4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BBI4_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.050e-17
Identity = 122/270 (45.19%), Postives = 156/270 (57.78%), Query Frame = 1 
Query:   43 KRGGRGGGGRQHFVSSLEELESRNDRD---EAWEARRKAERLA--NGE-----SSEDEDGEDKKKGGAXXXXXXXXXXXXXXARGGAAAEEVVMEKKQPKA-KGVSSLIEVANPNAKPKAGRMMKAKDMD-MAAAPVE----LSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------GPQKLNPLEVKKMNPTRLKELLKERDESLQGSKKDLISRLLAWE 786
            K+G R GG +  ++++ +EL SR++RD    A  A+R+A+R+A  NGE     SSE+ED +                             EV   K +PK  KG + +++ ANPN + +  R MK KDM  MAAA  E    L+R+ER+A EA+RKK  Y KLHAEGKT E Q DM RL  V+ RR E    XXXXXXXXXXXXXXXXXXXX              G  KL+P EVKKMN  +LK+ LKER   + G KKDLI+RLLA++
Sbjct:   25 KKGHRKGGPK--YIANADELASRDERDAEKNAENAKRRADRIAEANGEAAAESSSEEEDFD------------------------ALVQAEVXXXKPKPKKNKGAAGVLKTANPNDQ-RQDRGMKIKDMGKMAAAEEEAEPRLTRKERDAQEAERKKAAYDKLHAEGKTDEYQKDMERLKAVQARRAEQEAAXXXXXXXXXXXXXXXXXXXXMENANLDDXXXXXXGFDKLDPREVKKMNGKQLKDALKERGLGIAGQKKDLIARLLAFQ 267
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BLAST of mRNA_L-elsbetiae_contig207.6237.1 vs. uniprot
Match: A0A662XMG9_9STRA (SAP domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XMG9_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.450e-17
Identity = 97/267 (36.33%), Postives = 138/267 (51.69%), Query Frame = 1 
Query:   64 GGRQHFVSSLEELESRNDRDEAWEARRKAERLANGESSEDEDGEDKKKGGAXXXXXXXXXXXXXXARGGA-AAEEVVMEKKQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKR-------------------------REEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPQKLNPLEVKKMNPTRLKELLKERDESLQGSKKDLISRLLAWE 786
            G  + FV+SLEE+  R++++E  ++ RKA R    E S D +         X               G + +A+   +E+ +PK  G +++ +  NPNAK KA ++MKAKDMD  AAP +LSRREREA+E +R   +Y+K H  G+T EA+ D+ARLA V++                          R++              XXXXXXXXXXX        P  L+   +K++ P  LKE LKERD S QG KKDL+ RL+ +E
Sbjct:   26 GATRKFVTSLEEMTLRDEQEELKQSARKARREDGEEGSGDSEXXXXXXXXXXEELVAFERVQTKSLFGFSNSADGPALEETKPKKVGFAAIAKTQNPNAKKKANKVMKAKDMDADAAPQQLSRREREAIEKERAAAYYLKKHLAGETDEAKKDLARLAEVKRXXXXXXXXXXXXXAGAYRTVLTELLWRDDGSMLTDVCTFWWKLXXXXXXXXXXXVQVKDDDEP--LDARAIKQLKPAVLKEKLKERDLSTQGQKKDLVQRLIDYE 290
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BLAST of mRNA_L-elsbetiae_contig207.6237.1 vs. uniprot
Match: H3GIA2_PHYRM (SAP domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIA2_PHYRM)

HSP 1 Score: 92.4 bits (228), Expect = 3.350e-17
Identity = 94/170 (55.29%), Postives = 121/170 (71.18%), Query Frame = 1 
Query:  277 AEEVVMEKKQPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPQKLNPLEVKKMNPTRLKELLKERDESLQGSKKDLISRLLAWE 786
            A+   +++ + K  G +++ +  NPNAK  + ++MKAKDMD  AAP ELSRREREA+E +R   HY+K H  G+T+EA+ D+ARL  V++      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  + L+   +K + P  LKE LKERD S QG KKDLI RL+ +E
Sbjct:   94 ADGPTLQQDKSKKSGFAAIAKTQNPNAKKNSNKVMKAKDMDGNAAPQELSRREREAIEKERAAAHYLKKHLAGETEEAKKDLARLKEVKR------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPLDARAIKALKPAILKEKLKERDLSTQGQKKDLIQRLIDYE 257
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BLAST of mRNA_L-elsbetiae_contig207.6237.1 vs. uniprot
Match: G4ZRN8_PHYSP (SAP domain-containing protein n=8 Tax=Peronosporaceae TaxID=4777 RepID=G4ZRN8_PHYSP)

HSP 1 Score: 89.4 bits (220), Expect = 3.850e-16
Identity = 87/156 (55.77%), Postives = 109/156 (69.87%), Query Frame = 1 
Query:  319 GVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPQKLNPLEVKKMNPTRLKELLKERDESLQGSKKDLISRLLAWE 786
            G +++ +  NPNAK KA ++MKAKDMD  AAP +LSRREREA+E +R   +Y+K H  G+T EA+ D+ARLA V++      XXXXXXXXXXXXXXXXXXXXXXXXX       + L+   +K + P  LKE LKER  S QG KKDLI RL+ +E
Sbjct:  109 GFAAIAKTQNPNAKKKANKVMKAKDMDGNAAPQQLSRREREAIEKERAAAYYLKKHLAGETDEAKKDLARLAEVKR------XXXXXXXXXXXXXXXXXXXXXXXXXVEVKDDDEPLDARAIKALKPALLKEKLKERKLSTQGQKKDLIQRLIDYE 258
[Close]
BLAST of mRNA_L-elsbetiae_contig207.6237.1 vs. uniprot
Match: A0A0K8RRU9_IXORI (Putative casein kinase substrate phosphoprotein pp28 (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A0K8RRU9_IXORI)

HSP 1 Score: 87.0 bits (214), Expect = 5.980e-16
Identity = 88/181 (48.62%), Postives = 113/181 (62.43%), Query Frame = 1 
Query:   40 GKRGGRGGGG----RQHFVSSLEELESRNDRDEA---WEARRKAERLANGESSEDEDGEDKKKGGAXXXXXXXXXXXXXXARGGAAAEEVVMEKKQPKAKGVSSLIEVANPN-AKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREE 558
            G+ G RGGGG    R+HF + LEELE    ++E    W+A+R       GE        D + G  XXXXXXXXXXXXX     A     + E++Q KAKGV  LIEV NPN  + K  ++ +  + D+A AP +LSRRERE VE Q+ K HY K+HA GKT+EA+ D+ARLAL+RK+REE
Sbjct:    1 GRGGSRGGGGHKGQRRHFTN-LEELEREKQKEERTRQWKAQR-------GEG-------DDESGSXXXXXXXXXXXXXXEKPKTAEGXXXLSEEEQQKAKGVEHLIEVENPNRVEKKVKKVAQLDEKDLAEAP-QLSRREREEVEKQKAKVHYQKMHAAGKTEEARADLARLALIRKQREE 165
[Close]
BLAST of mRNA_L-elsbetiae_contig207.6237.1 vs. uniprot
Match: A0A8C9RXJ8_SCLFO (28 kDa heat- and acid-stable phosphoprotein-like n=3 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9RXJ8_SCLFO)

HSP 1 Score: 84.0 bits (206), Expect = 2.590e-15
Identity = 48/85 (56.47%), Postives = 63/85 (74.12%), Query Frame = 1 
Query:  304 QPKAKGVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKDHYMKLHAEGKTQEAQVDMARLALVRKRREE 558
            Q + KGV  LIE+ NPN   +  +  K  D+D+ + P ELSRRERE +E QR KDHYMKLH EGKT++AQ D+ARLA+++K+REE
Sbjct:   54 QQRRKGVEGLIEIENPNRITQNSK--KVTDLDV-SVPKELSRREREEIEKQRAKDHYMKLHLEGKTEQAQADLARLAIIKKQREE 135
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig207.6237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYK5_9PHAE5.250e-8881.75SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FHS2_ECTSI1.830e-6694.01Similar to PDGF associated protein n=1 Tax=Ectocar... [more]
A0A7S2SP28_9STRA3.310e-1943.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A484E654_BRELC2.050e-1839.67SAP domain-containing protein n=1 Tax=Bremia lactu... [more]
A0A7S2BBI4_9STRA2.050e-1745.19Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A662XMG9_9STRA2.450e-1736.33SAP domain-containing protein n=2 Tax=Nothophytoph... [more]
H3GIA2_PHYRM3.350e-1755.29SAP domain-containing protein n=1 Tax=Phytophthora... [more]
G4ZRN8_PHYSP3.850e-1655.77SAP domain-containing protein n=8 Tax=Peronosporac... [more]
A0A0K8RRU9_IXORI5.980e-1648.62Putative casein kinase substrate phosphoprotein pp... [more]
A0A8C9RXJ8_SCLFO2.590e-1556.4728 kDa heat- and acid-stable phosphoprotein-like n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig207contigL-elsbetiae_contig207:17483..23470 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score228.8
Seed ortholog evalue2.9e-57
Seed eggNOG ortholog2880.D7FHS2
Preferred namePDAP1
Hectar predicted targeting categoryother localisation
GOsGO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0006887,GO:0006955,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008283,GO:0009987,GO:0012505,GO:0016020,GO:0016192,GO:0019838,GO:0023052,GO:0030141,GO:0031410,GO:0031974,GO:0031982,GO:0032940,GO:0036230,GO:0042119,GO:0043226,GO:0043227,GO:0043229,GO:0043233,GO:0043299,GO:0043312,GO:0044421,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0048008,GO:0048407,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0065007,GO:0070013,GO:0071944,GO:0097159,GO:0097708,GO:0099503,GO:0101002,GO:1901363,GO:1904813
EggNOG free text desc.Casein kinase substrate phosphoprotein PP28
EggNOG OGsKOG3375@1,KOG3375@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionCasein kinase substrate, phosphoprotein PP28
Ec32 orthologEc-07_006570.1
Exons4
Model size1926
Cds size786
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig207.6237.1prot_L-elsbetiae_contig207.6237.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig207 17501..22348 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815851.1459067-UTR-L-elsbetiae_contig207:17482..175001622815851.1459067-UTR-L-elsbetiae_contig207:17482..17500Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig207 17483..17500 +
1691683145.8024845-UTR-L-elsbetiae_contig207:17482..175001691683145.8024845-UTR-L-elsbetiae_contig207:17482..17500Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig207 17483..17500 +
1622815851.2175953-UTR-L-elsbetiae_contig207:22348..234701622815851.2175953-UTR-L-elsbetiae_contig207:22348..23470Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig207 22349..23470 +
1691683145.8626506-UTR-L-elsbetiae_contig207:22348..234701691683145.8626506-UTR-L-elsbetiae_contig207:22348..23470Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig207 22349..23470 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815851.158025-CDS-L-elsbetiae_contig207:17500..178721622815851.158025-CDS-L-elsbetiae_contig207:17500..17872Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig207 17501..17872 +
1691683145.8127484-CDS-L-elsbetiae_contig207:17500..178721691683145.8127484-CDS-L-elsbetiae_contig207:17500..17872Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig207 17501..17872 +
1622815851.1788304-CDS-L-elsbetiae_contig207:19953..200761622815851.1788304-CDS-L-elsbetiae_contig207:19953..20076Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig207 19954..20076 +
1691683145.8211343-CDS-L-elsbetiae_contig207:19953..200761691683145.8211343-CDS-L-elsbetiae_contig207:19953..20076Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig207 19954..20076 +
1622815851.190259-CDS-L-elsbetiae_contig207:21359..215271622815851.190259-CDS-L-elsbetiae_contig207:21359..21527Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig207 21360..21527 +
1691683145.8384936-CDS-L-elsbetiae_contig207:21359..215271691683145.8384936-CDS-L-elsbetiae_contig207:21359..21527Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig207 21360..21527 +
1622815851.202084-CDS-L-elsbetiae_contig207:22225..223481622815851.202084-CDS-L-elsbetiae_contig207:22225..22348Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig207 22226..22348 +
1691683145.8521771-CDS-L-elsbetiae_contig207:22225..223481691683145.8521771-CDS-L-elsbetiae_contig207:22225..22348Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig207 22226..22348 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig207.6237.1

>prot_L-elsbetiae_contig207.6237.1 ID=prot_L-elsbetiae_contig207.6237.1|Name=mRNA_L-elsbetiae_contig207.6237.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=262bp
MGRGRGKGKRGGRGGGGRQHFVSSLEELESRNDRDEAWEARRKAERLANG
ESSEDEDGEDKKKGGASESEGEGSSSEGEGARGGAAAEEVVMEKKQPKAK
GVSSLIEVANPNAKPKAGRMMKAKDMDMAAAPVELSRREREAVEAQRKKD
HYMKLHAEGKTQEAQVDMARLALVRKRREEAQAKKAEEEAGGEGASGKEK
MEKEAKAKAGGGGPQKLNPLEVKKMNPTRLKELLKERDESLQGSKKDLIS
RLLAWEKNNQT*
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mRNA from alignment at L-elsbetiae_contig207:17483..23470+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig207.6237.1 ID=mRNA_L-elsbetiae_contig207.6237.1|Name=mRNA_L-elsbetiae_contig207.6237.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5988bp|location=Sequence derived from alignment at L-elsbetiae_contig207:17483..23470+ (Laminarionema elsbetiae ELsaHSoW15)
CGCAGAAGCAAGTACACGATGGGCCGTGGAAGGGGAAAAGGGAAGCGCGG
TGGTCGGGGTGGGGGCGGGCGGCAACACTTCGTGTCTTCCCTCGAGGAGC
TCGAGTCTCGCAACGACAGGGACGAAGCCTGGGAGGCGCGCCGAAAGGCC
GAGCGCTTGGCGAACGGAGAGTCCTCCGAGGACGAGGATGGAGAAGACAA
GAAGAAGGGCGGTGCTTCTGAGAGCGAAGGAGAAGGTAGCAGCAGTGAGG
GAGAGGGGGCGCGGGGTGGGGCTGCTGCGGAGGAGGTGGTGATGGAGAAG
AAACAGCCAAAGGCGAAGGGGGTGTCGTCCTTGATAGAGGTGGCCAACCC
TAACGCCAAGCCCAAAGCAGGGAGAATGATGAAGGCCAAGGTGTGTGCAT
GTCGGCTGAGGGGGGGGGGGGGGGGGGGGGTGGGTATATAAGTGGGGGGT
TCTTCGGGGGTTTGGGGGGGGGAGAAACTGCACAGAGTTGCTACTTTTGT
GCCNNNNNNNNNNAACAGCACAGGAGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGAGGTTGTGTAT
ATAAGTGTGGTGTACTTCGAGCGTTTGGGCGGGGAAGAAACTGCACAGAG
TTGCTACTTTTGTGCCCTCATATCTGGGTGCAGTTTTCACATGAGAGCTT
GGGGCTTCCAATCAAGCGACGGTCGTATCACTGACTGCCCCATATGCACG
AATCATAAACACACCCACCTACAAATACGATATTGGTAACGATCGTTTGG
GGGCACATCTAGTTTCGGCACTACATACTACATACCCGCTTATTTTTTCG
TACACATGGGGGTGGTAGGTACAAAAGTAAAACTTGGGTGGTGGGGGGGG
GGGGGGTCCCTTTTGGACAGCGTGCATGTCCAGCGGCGGTGCTATCACCC
CAACTCTAATACATACCAGGTCATGTCATGTGTAGTGCACGTGTTTCACC
CTTGACCGTAACAAACCGGGGTCCTGCCCACAAAAGATTTTTAGTTTCAG
AGTTTGTCCGATCGGCAGCCGGACGAGAGCTGTGTCCTTCCTGCCTGTAT
CGCCGTGTTGCTCGCGCTCCAACAAGAGGTGTCGTTGCTTTGCCCAACAG
TGCTGCACGCCAGTTTAAGGGATCGCCAGTCGGAAAACCCCTTTCGGCTG
CTGTGCGGTCCGGCGACGACACTATATACACATCTAAGGCACTGCGGCCG
TAGAGTTCTGCCTTCCCTGTCTAATGACACCTGGTTTGTCAAGCTTCTCT
CGCTATTGACCTCAAACCCGAAGAAAAAAACTTTCGCAGTTGTGCCGCAA
AATAGCTGGCAAACTTTGTGCGGCGCAACCTCCCGCTTGGTGGCTGGGTG
GCGCGTGGATTTTACCGGATGGCGAGAACGCGTCGCAGACAGAACGGATC
GTTACGGAATTTGGCACGTAGACTAGACGTACCCTGAAGACCTAGCACCG
AAAGTGGCGCGTCGAAATACACACAGCGGCAGTCAGGAGGGACGTTTTTC
TCATAAAATTCGCCTTCGCGCACAGGCATCATGCTTAGCTTCCTACAAAC
GGTTCAGGAAGGGTGCACTGGTGTGTCAAAGAGGGTGTTGTGAGGGTTTC
TCAGCAGTTCGACTTTTGCTGCAACACGCAGTTTAGGCCGAGAACTCGCA
ATCGGCGCGAAACAAGTTTTGAATTTGCGCGGATATCGTATGTACTCTTC
GGTCGATACAAAAAAAAGGCGAATTTTATGAGAAAAACGTCCCTCCTGAC
TGCCGCTGTGTGTATTTCGACGCGCCACTTTCGGTGCTAGGCCTTCAGGA
TACGTCTAGTCTACGTGCCAAATTTCGTAACGATCCGTTCTGTCTGCGAC
GCGTTCTCGTCATCGGGTAAAATCCACGCGGAGGCATAGAGGTTGCCCCG
CACAAAAGTTTGCCAGCTGTTTTTTTTTTTTTCTTCACCGTGCAGCACTG
CCAATTTTCGTCGGGAGCTGTGGGTATCACGTGCACGCATACAAAGCAAT
AGACAGCAGTGCTGATGGCAGTGGCGTTAACGTTGCAAATGGTGCTGGCG
GACGGGAAAGACAGCAATAGGCAACAGCAGTGATGAATACATAAATAGTA
GTGGCGTCAGTTGAAGTTGCAAATGTTGTTGGGTTGGCGGGCAGGAAAGG
TCTTCCGTTGCCTGCGGATTATGCTCTGGATGGGGGTGTGCTCTCAAGTT
CAAGTTTCTCAAGACAGGCGCCACTTAGATGTGCTAAAATGATCATGTCT
TGTCGCTTACAAATGTTTTCCTTCTCTCTCGTGCCGACTCTCTCTCTCTC
TCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTACCCGTTATCCCCGACCACGCTTCGATACTGCTCTGTTGTGGCACGA
TGCAATACGGCACGGCGGCAGGATATGGATATGGCGGCCGCGCCGGTGGA
GCTCTCGAGGCGCGAGCGAGAGGCAGTAGAGGCCCAAAGGAAGAAGGACC
ACTACATGAAGCTCCACGCCGAGGGAAAAACACAGGAGGCGCAGGTACTT
AGGCCGGATCTTATGGGGGCCAAATTCTCCACGGAACGAGTTTTTTGTCC
TGGGGCGGACCCCTGAACCGAAAAGGGGGGTGTTGGGGGGCCTCGAACCC
CCACGAAATGGAGACACGCCCTACCGTCACCACACCACCCATGAACCCTC
CGGCCATAGCTGACGGATTGCCACAAAAACGTTTCAGGCCTACGCTCCAT
ACTGGTAGGATTATTCGCAGCTAGCCCTTGTTGTCAGGCGATTTTTTTGT
GGCGAGGGCTGGTTGATGTTGTGAACAAAACACAGATCCGTCTGGCAAGA
CGTCCCACGAAATATACCCCCCAAAAACGTGTTATTTCGCGGACGGATTG
GTCACACGAAATGTGATTTTCGATCGCGCGCCGACTGCCTCTCGAGCCAC
ACGAAGCCTATGACCACGAAAAAACTATCTCAAGACTCCGACAGGTATGG
AGCGTACAGCCAAGAAGGTCTCGTGTCAATCCGTGAGCTATGGCCTGAGA
CAGTAGTGTAGCCGTGGTTTGGTTGGCGACCCAAAAAAATCCGTTCGTGT
CTCGCCTACTCCTCCCCCCCTCCAAAGGGGGAGCCACGGACCAGAACAAA
AATTCCGTTCCGTGACAAAATTTCATCCCCATAAGATCCGGCCTTACATC
TCTCGTTCTACTTGTAATTTAGTGTCGAAAACATTGTTTTCACCGTTGAA
GCCTTCTGCGGGGCGGAGTACGCTGGTGTCCCTCCCTGCCGCCGTCGCCG
CGGGCCCCCCTGCCGATTTGCATTTTGTTTTTCGCAGAATCTCATCAGGC
TTGTTTGAAAACTGATGCATACTGCTGTCGACGTGTTTTTGTCCCCATGT
GCACCGTCTGCTCCGGTGCTGTCACCCTGAAACGGCTCGCTACCGGAGTC
TTGGGGCTTTGTGCGTGGGTGTATGATTAGAGCCGGGGTGGCATGCACGG
CGTCCCCTCTTTTCTTTCGTAGTAGTGACTTTCATTTACCAAACGAGCCA
AGGAAGACGAGACACCCAACGCAAAAGAGTAAAAAAAAAATGTCACCACA
GAAGAGGCAAAAACGCGCAAATTGTTGCTTTCCCCGCACCAAAGGAAAAC
GCAATCTTCGGCGGAGGCAACTTTGTGTCGTGCACCTACCACTTACTTAC
CCATGTCGTACCCCCAAGTATCTGTGTGTATACTCCTCCCGTGTAAACAA
ATAGGCGTGAAGCGCCGTGCTTCCTTCCTAGCTTTTGACCGGTGCAACAA
ATGTGTTTTTTTGCGGCTTGGTTTTAGGTCGACATGGCGCGGCTGGCGCT
GGTCCGCAAGCGGCGCGAAGAGGCACAAGCGAAGAAGGCAGAGGAGGAGG
CAGGGGGAGAGGGGGCCTCGGGCAAAGAAAAAATGGAGAAAGAAGCCAAG
GCCAAAGCCGGCGGCGGCGGCCCCCAGAAGCTCAATCCTTTGGAGGTGAG
CTGCGCTGTCTGCCCCTCAGGGAAGCCAGCGTCCCCGCACTCTCCTGACA
GGGCACGGGAGTGGATGGATGCCCTACGTAGTGGGCGCCCACCGGGTGGC
TTTCGTTTCCGAGAGAGAGGTCGCCCCATTGTGAGGCCGGTGCTTCTACC
GGGGTCCTGCAGCGCAGTACAGTGTATGTCTCGATGGACCTGACGCTCTT
TTTGCCCGTGCCCCCGACTAGACTAGGGGCTCTACCTGCTTACGGCGTTT
GTTCTTCGCATTCTGTGTGTGTGTATTTGCTTTTTGCGGCCAATGTGTGG
TGCAGCAGTTTAGTATTCTTGTACATGGTTGTTTTATTTTGCCTGGCGCC
ATGTTTTTCGTTCGCGGTGTTGTTGTCACACACCAAGTATGTATGGTAGT
TTCTTTTGTTTGCCCTTGCGGGGTTTTGGTGGCCCCGCTTTGTTGCCACG
GGCTCCGGGACTTTCGGCGCTGCGTTATGTAACGTGTAAAGAACAACGGT
AACGTCAATGCGCGTTCTCTCTGTCGAGTTTCTGCCCTCAGATGCATGTC
AGTAATGATCTGTTAATAATGATTTTCTTTTTCACGTCCATGTTGTGACT
GCCCCGGTGCGTCCCCTTTCGATGTTCTTCTGCACGTTTTTTTGTTTTTT
GTACTCACGTGTAACATTAAATCGTAAAAATGTGTAAAAACAGGTGAAAA
AGATGAACCCGACTCGGCTGAAGGAGCTGCTCAAGGAACGCGACGAGAGC
CTGCAGGGGAGCAAGAAAGATCTCATATCGAGACTCTTGGCTTGGGAAAA
AAACAACCAGACGTGACGTCACTTTTAGTTCCGTATTTGTGCTGATTACG
GGGATGTCTTTTTTGCGCTTTATCTTACGCGCTGGACCTGTTGTGTCGTC
GTGAGGTTTTCCCTGCGGCTTTGGAGGTGGGGGGTTGTCTGCACCACTCT
GTTGTATCTTTGTACAAACGCTCTCGGCAGTGTGTGTGTTGTCCTTGGGG
CTGAGGACGATAGGATGTGTTTGAGTGTTGTGGTAGGAAGAGAAGCTCCC
TCGAAAGGCTATCCTGGTGTTCTTGGAGGTGTCCTCCCCCGCTGTCGCCC
GCTCTCTGCCTTTGTATCCCTCCTTCATGTCCCTTGTCTCGAAGTCCTTT
TTTTTTTCGGCTTGCAATTGTTGAGATTCAAGGCGCGGGCTGAACTCACT
GCCGTGTACTGAATCAACACTCAGTCGGTTCCTTCAGTAACACTCAGTCG
GTCCCTTCGATGTTGGCTTACGAGCGCAAGTGTTTTGGCGGTTGAAGAAG
TCGAGTGTAGGGGCGGCGCAAGCGCTGTTGGACCTCACCCCTGACGATAC
GACGTATGCGGGCAGTAACAGGAGCGCGCGATGCCGTTGCGCCGGTAGGG
CAGCAACGCAAAGCGTGCGTGCTGTTGGCGTAAGTGGGTCGGGGCCGTGG
CGTGGTTGTGAGTGTCTGCCGCGTGTAATGCTTTGTTCAGCTGGTTTACG
CGCTTTTGCGACGTCTATGTTGGCTGGGGGAGCAGCAACTCGCTGAGTCA
ACTCAATGAAAAAAGTGTGTTACGCAAATCGTACGCAGCCGTCAAGAAGA
GCTGCGATTCGCCGTGCGTAGGAGGTGGAGAGCAGCAGCAGTGTGTTATC
TACTGCTGCTGTAGCGCTGAGGAGAGCGGAAGTGGGTGGGTGCTCGTCTA
CTAGTGGTGTAGACCTCCGAGTTTACTGAGTCGGGTTATCGACCCGTGGA
GAATGTTGGCCCTCGAAGCGAAAGCAGCGAACGAAAGTCACCGGGTTGTC
GGGCTCTCGGCACATCTTGCCCGTGCCTGCCGTGGATGGCGCACATGGGG
CATTGAAGCAGACGCGGCTCGACGGGGCAGAGCGCGCTTCGCTGGTTGGT
CAAACATGTCTCGAGTCAGCAAGCACCACACGACGCAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig207:17483..23470+

>mRNA_L-elsbetiae_contig207.6237.1 ID=mRNA_L-elsbetiae_contig207.6237.1|Name=mRNA_L-elsbetiae_contig207.6237.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1572bp|location=Sequence derived from alignment at L-elsbetiae_contig207:17483..23470+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCCGTGGAAGGGGAAAAGGGAAGCGCGGTGGTCGGGGTGGGGGCGG
GCGGCAACACTTCGTGTCTTCCCTCGAGGAGCTCGAGTCTCGCAACGACA
GGGACGAAGCCTGGGAGGCGCGCCGAAAGGCCGAGCGCTTGGCGAACGGA
GAGTCCTCCGAGGACGAGGATGGAGAAGACAAGAAGAAGGGCGGTGCTTC
TGAGAGCGAAGGAGAAGGTAGCAGCAGTGAGGGAGAGGGGGCGCGGGGTG
GGGCTGCTGCGGAGGAGGTGGTGATGGAGAAGAAACAGCCAAAGGCGAAG
GGGGTGTCGTCCTTGATAGAGGTGGCCAACCCTAACGCCAAGCCCAAAGC
AGGGAGAATGATGAAGGCCAAGATGGGCCGTGGAAGGGGAAAAGGGAAGC
GCGGTGGTCGGGGTGGGGGCGGGCGGCAACACTTCGTGTCTTCCCTCGAG
GAGCTCGAGTCTCGCAACGACAGGGACGAAGCCTGGGAGGCGCGCCGAAA
GGCCGAGCGCTTGGCGAACGGAGAGTCCTCCGAGGACGAGGATGGAGAAG
ACAAGAAGAAGGGCGGTGCTTCTGAGAGCGAAGGAGAAGGTAGCAGCAGT
GAGGGAGAGGGGGCGCGGGGTGGGGCTGCTGCGGAGGAGGTGGTGATGGA
GAAGAAACAGCCAAAGGCGAAGGGGGTGTCGTCCTTGATAGAGGTGGCCA
ACCCTAACGCCAAGCCCAAAGCAGGGAGAATGATGAAGGCCAAGGATATG
GATATGGCGGCCGCGCCGGTGGAGCTCTCGAGGCGCGAGCGAGAGGCAGT
AGAGGCCCAAAGGAAGAAGGACCACTACATGAAGCTCCACGCCGAGGGAA
AAACACAGGAGGCGCAGGATATGGATATGGCGGCCGCGCCGGTGGAGCTC
TCGAGGCGCGAGCGAGAGGCAGTAGAGGCCCAAAGGAAGAAGGACCACTA
CATGAAGCTCCACGCCGAGGGAAAAACACAGGAGGCGCAGGTCGACATGG
CGCGGCTGGCGCTGGTCCGCAAGCGGCGCGAAGAGGCACAAGCGAAGAAG
GCAGAGGAGGAGGCAGGGGGAGAGGGGGCCTCGGGCAAAGAAAAAATGGA
GAAAGAAGCCAAGGCCAAAGCCGGCGGCGGCGGCCCCCAGAAGCTCAATC
CTTTGGAGGTCGACATGGCGCGGCTGGCGCTGGTCCGCAAGCGGCGCGAA
GAGGCACAAGCGAAGAAGGCAGAGGAGGAGGCAGGGGGAGAGGGGGCCTC
GGGCAAAGAAAAAATGGAGAAAGAAGCCAAGGCCAAAGCCGGCGGCGGCG
GCCCCCAGAAGCTCAATCCTTTGGAGGTGAAAAAGATGAACCCGACTCGG
CTGAAGGAGCTGCTCAAGGAACGCGACGAGAGCCTGCAGGGGAGCAAGAA
AGATCTCATATCGAGACTCTTGGCTTGGGAAAAAAACAACCAGACGTGAG
TGAAAAAGATGAACCCGACTCGGCTGAAGGAGCTGCTCAAGGAACGCGAC
GAGAGCCTGCAGGGGAGCAAGAAAGATCTCATATCGAGACTCTTGGCTTG
GGAAAAAAACAACCAGACGTGA
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