mRNA_L-elsbetiae_contig2069.6232.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2069.6232.1
Unique NamemRNA_L-elsbetiae_contig2069.6232.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig2069.6232.1 vs. uniprot
Match: D8LF43_ECTSI (RPA_interact_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF43_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 9.190e-79
Identity = 123/174 (70.69%), Postives = 141/174 (81.03%), Query Frame = 1 
Query:  301 MEGDGLGWGDDG-VESYSDEDHMLSPEEYLEMMQYIEEACKEEDRLAEAEALEEYETTKRLEEEEFEYAVSSGLAGVDGNGQADADAVLCPICKLDYLVQAGPPSDSIVCACGFRLDTAGDRLGLEHLRQQLAETYGQHGAGCSADPSFALEGASGLDVLWSSCEGCGFARVVL 819
            ++ D LGWGD G  E   DE+H+LSP+EYLEMMQYIEEACKEED  AEA  LE+YE T+RLEEEE EYAV+S L  ++GNGQ DA  VLCP+CK DYL+  GPPS SIVCACGFRLDT GDRLGLEH +QQLA+TY +H   CSA+PSF +EGA G DVLWSSC+GCGFARVVL
Sbjct:    2 VDEDELGWGDGGGAEDDCDEEHLLSPDEYLEMMQYIEEACKEEDFRAEAAVLEDYELTRRLEEEEVEYAVAS-LDDINGNGQDDA--VLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDRLGLEHFKQQLADTYSEHSTACSAEPSFVVEGAPGFDVLWSSCDGCGFARVVL 172
[Close]
BLAST of mRNA_L-elsbetiae_contig2069.6232.1 vs. uniprot
Match: A0A6H5KTE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTE2_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 4.750e-24
Identity = 93/150 (62.00%), Postives = 103/150 (68.67%), Query Frame = 1 
Query:    7 SLLSAIEEENANYLNACAGGRGRGSPLQSRPPTAGRTTPGTAPE--PMSTSLREECQGFVAGG-EGDDALMVDDSRXXXXXXXXXXXXXXXXXXXXXXPEAMEGDGLGWGDDG-VESYSDEDHMLSPEEYLEMMQYIEEACKEEDRLAEA 444
            S LSAIEEENA+YLNACA  RG+G  LQ R P  G     TA E  PMS S RE+ QGFV G  + DDALM  D        XXXXXXXXXXXXXXXX   ++ D LGWGD G  E   DE+++LSP+EYLEMMQYIEEACKEED  AEA
Sbjct:  174 SFLSAIEEENASYLNACA--RGQGGSLQQRGPRDG-----TAAELAPMSISFREQTQGFVEGNNDEDDALMAHDD---GHAQXXXXXXXXXXXXXXXXXXMVDEDELGWGDGGGAEDCCDEENLLSPDEYLEMMQYIEEACKEEDLRAEA 313
[Close]
BLAST of mRNA_L-elsbetiae_contig2069.6232.1 vs. uniprot
Match: A0A835YX80_9STRA (Replication protein A interacting C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX80_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 4.020e-20
Identity = 59/156 (37.82%), Postives = 78/156 (50.00%), Query Frame = 1 
Query:  367 LSPEEYLEMMQYIEEACKEEDRLAEAEALEEYETTKRLEEEEFEYAVSSGLAGV-----DGNGQADADAVLCPICKLDYLVQAGPPSDSIVCACGFRLDTAGDRLGLEHLRQQLAETYGQHGAGCSADPSFALEGASGLDVLWSSCEGCGFARVVL 819
            L+PEEY +MM +IE+A   E   A+A                      + LA       DG G  D D VLCP+CK  +L+Q G    +I+C CGFRL T G+ + L  LRQ LAE +  H   C   P+F +    G  +LWS C  CGF ++VL
Sbjct:    5 LTPEEYTDMMLFIEQALAAELARADASXXXXXXXXXXXXXXXXXXXXXAALARAAAEAEDGRGWRD-DEVLCPVCKGGWLLQHGA---TIMCTCGFRLQTDGEGMQLGVLRQALAEVFTDHRERCHLQPTFRVREEFGAAMLWSECSACGFEQIVL 156
[Close]
BLAST of mRNA_L-elsbetiae_contig2069.6232.1 vs. uniprot
Match: A0A7S0VBY7_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VBY7_9CRYP)

HSP 1 Score: 65.9 bits (159), Expect = 1.640e-9
Identity = 49/157 (31.21%), Postives = 76/157 (48.41%), Query Frame = 1 
Query:  355 EDHMLSPEEYLEMMQYIEEACKEEDRLAEAEALEEYETTKRLEEEEFEYAVSSGLAGVDGNGQADADAVLCPICKLDYLVQAGPPSDSIVCACGFRLDTAGDRLGLEHLRQQLAETYGQH-GAGCSADPSFALEGA-SGLDVLWSSCEGCGFARVVL 819
            E+  LS EEY+ +MQY+EEA   E R  E E +      + L ++E   A S+ LA       A+   V CP+C  D L       + + C CG RL    +++ L  L   L + +  H  +GC+  P  +++    G+D+L  +C  C F  VV+
Sbjct:   31 EEDGLSEEEYIGLMQYLEEAVVTELRKQEQEII-----AQELFDQER--AESNALAA----SHAEGHRVTCPVCMRDTLHSH---RNVVFCGCGMRLSCQTEQVSLVQLESMLLDRFAAHTSSGCANQPVCSIQTVPGGVDMLMMACAACDFMDVVV 173
[Close]
BLAST of mRNA_L-elsbetiae_contig2069.6232.1 vs. uniprot
Match: A0A2D4BMQ0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMQ0_PYTIN)

HSP 1 Score: 55.1 bits (131), Expect = 3.050e-5
Identity = 51/168 (30.36%), Postives = 79/168 (47.02%), Query Frame = 1 
Query:  367 LSPEEYLEMMQYIEEACKEEDRLAEAEALEEYETTKRLEEEEFEYAVSSGLAGVDGNGQADADA----------VLCPICKLDYLVQAGPP-SDSIVCACGFRLDTAGDRLG-LEHLRQQLAETYGQHGAGCSADPSFALEGA------SGLDVLWSSCEGCGFARVV 816
            LS ++YL++MQ +EEA +EE R    E+++E    +++ + E E ++ + L G+D +G AD D           VLCP+CK   L  A    S ++ C CGF         G LE  ++++   +  H   C+ +P F   G          D L  SC  CG    V
Sbjct:  100 LSEDDYLDIMQSLEEALREESR---EESVDELLLAEQMVDFE-EASLMAMLNGLDLDGVADFDQHYVADESGLHVLCPMCKTGSLECATRSWSSTLFCKCGFTFVLKDVLHGALEDFQERIVAAFLFHRESCAVEPCFDKIGDVKDGDHEVTDALLLSCATCGHESFV 263
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2069.6232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LF43_ECTSI9.190e-7970.69RPA_interact_C domain-containing protein n=1 Tax=E... [more]
A0A6H5KTE2_9PHAE4.750e-2462.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YX80_9STRA4.020e-2037.82Replication protein A interacting C-terminal-domai... [more]
A0A7S0VBY7_9CRYP1.640e-931.21Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A2D4BMQ0_PYTIN3.050e-530.36Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2069contigL-elsbetiae_contig2069:11777..16244 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score77.4
Seed ortholog evalue9.5e-12
Seed eggNOG ortholog7668.SPU_020179-tr
Preferred nameRPAIN
Hectar predicted targeting categoryother localisation
GOsGO:0001650,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006606,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006974,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0015031,GO:0015833,GO:0016604,GO:0016605,GO:0017038,GO:0031974,GO:0031981,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0044877,GO:0045184,GO:0046483,GO:0046907,GO:0050896,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0090304,GO:1901360,GO:1901576
EggNOG free text desc.protein import into nucleus
EggNOG OGs2C8FC@1,2R0QT@2759,39SXM@33154,3BKGT@33208,3CTDP@33213
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionRPA-interacting protein
Ec32 orthologEc-06_001600.1
Exons4
Model size826
Cds size681
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2069.6232.1prot_L-elsbetiae_contig2069.6232.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2069 11781..16103 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815850.6234732-UTR-L-elsbetiae_contig2069:11776..117801622815850.6234732-UTR-L-elsbetiae_contig2069:11776..11780Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2069 11777..11780 -
1691683145.4521186-UTR-L-elsbetiae_contig2069:11776..117801691683145.4521186-UTR-L-elsbetiae_contig2069:11776..11780Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2069 11777..11780 -
1622815850.678642-UTR-L-elsbetiae_contig2069:16103..162441622815850.678642-UTR-L-elsbetiae_contig2069:16103..16244Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2069 16104..16244 -
1691683145.5052907-UTR-L-elsbetiae_contig2069:16103..162441691683145.5052907-UTR-L-elsbetiae_contig2069:16103..16244Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2069 16104..16244 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815850.633988-CDS-L-elsbetiae_contig2069:11780..118861622815850.633988-CDS-L-elsbetiae_contig2069:11780..11886Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2069 11781..11886 -
1691683145.4653108-CDS-L-elsbetiae_contig2069:11780..118861691683145.4653108-CDS-L-elsbetiae_contig2069:11780..11886Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2069 11781..11886 -
1622815850.6447704-CDS-L-elsbetiae_contig2069:12653..128261622815850.6447704-CDS-L-elsbetiae_contig2069:12653..12826Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2069 12654..12826 -
1691683145.4749174-CDS-L-elsbetiae_contig2069:12653..128261691683145.4749174-CDS-L-elsbetiae_contig2069:12653..12826Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2069 12654..12826 -
1622815850.6552405-CDS-L-elsbetiae_contig2069:13332..134281622815850.6552405-CDS-L-elsbetiae_contig2069:13332..13428Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2069 13333..13428 -
1691683145.484472-CDS-L-elsbetiae_contig2069:13332..134281691683145.484472-CDS-L-elsbetiae_contig2069:13332..13428Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2069 13333..13428 -
1622815850.6672862-CDS-L-elsbetiae_contig2069:15797..161031622815850.6672862-CDS-L-elsbetiae_contig2069:15797..16103Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2069 15798..16103 -
1691683145.4941287-CDS-L-elsbetiae_contig2069:15797..161031691683145.4941287-CDS-L-elsbetiae_contig2069:15797..16103Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2069 15798..16103 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2069.6232.1

>prot_L-elsbetiae_contig2069.6232.1 ID=prot_L-elsbetiae_contig2069.6232.1|Name=mRNA_L-elsbetiae_contig2069.6232.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=227bp
MSTSLREECQGFVAGGEGDDALMVDDSRGGEELTLQQKKQQQQQQQQQQQ
PEAMEGDGLGWGDDGVESYSDEDHMLSPEEYLEMMQYIEEACKEEDRLAE
AEALEEYETTKRLEEEEFEYAVSSGLAGVDGNGQADADAVLCPICKLDYL
VQAGPPSDSIVCACGFRLDTAGDRLGLEHLRQQLAETYGQHGAGCSADPS
FALEGASGLDVLWSSCEGCGFARVVL*
back to top

mRNA from alignment at L-elsbetiae_contig2069:11777..16244-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2069.6232.1 ID=mRNA_L-elsbetiae_contig2069.6232.1|Name=mRNA_L-elsbetiae_contig2069.6232.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4468bp|location=Sequence derived from alignment at L-elsbetiae_contig2069:11777..16244- (Laminarionema elsbetiae ELsaHSoW15)
TCGTCCTCGCTCTTGTCGGCTATCGAAGAAGAAAACGCCAACTACCTCAA
CGCCTGCGCGGGAGGGCGAGGGCGAGGCTCGCCGCTGCAATCCCGCCCGC
CGACCGCTGGCAGGACGACTCCCGGGACTGCCCCGGAACCGATGTCCACC
AGCCTTCGAGAAGAGTGTCAAGGGTTTGTTGCGGGAGGGGAAGGCGACGA
TGCTCTTATGGTGGACGATAGCAGAGGTGGAGAAGAGTTGACGTTACAGC
AGAAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGGAGGCG
ATGGAGGGAGACGGGTTGGGGTGGGGTGACGATGGGGTGGAGAGCTACAG
CGACGAGGATCACATGCTATCGCCCGAGGAGTACCTGGAGATGATGCAGT
ACATCGAAGAGGCTTGCAAGGAGGAAGACCGATTGGCCGAGGCTGAGGTG
GGTCTTTCCTTTTGTCTTTCGGCAGCGCCCACCACCCTACGGAAGCGGCA
GCGCCTCGACCCGAACACCGACCCGCGAGGGACGCATTGGAGTATTTCAC
AGCACGGGAGAAGAAAGTTGAAGGTCGTCCGTCGGAGATGAGAATGCGCC
AACAACCCTTGGTACATAAAATACACAGCCGTCAGTATCGCTGCTCTTTG
TATTGATATTCTAAATCTGTACACAGCCGTCAATATCGCTGCCATGTTTT
GATATTCTTGGAATGAAAGTCTGTTGCTGAAGTGCTGACGCAACAATATC
AATCGCACATACAAACAAGAGACTTGTCAGTTGCTAGAAGATCTCTCAGT
GTGGTAATTCATGCACAATTTGACAAATTCTCCAGACTGTGTACATATTT
GTTGGCCCGGTGTTCGATCGACCCGTGGTCTCGACCCACAGGTCTTCCTG
ACAGGCCCGAGGGCGGGTCATTTGACTAGGCTAGCCCGGTGCTCGATTGA
CCCGTGGTCTCGACCCACGGATCTCCCCGACGGGCCAGGGCGAGTCACTG
ACGGGTCAGCCCTGAACCGACCCGTCAAGTAACCCGTTTGACGGGTCACT
GACCCGACCCGACCGACCTGACATGACCCGACAGATTTCAAATCCGCCCG
ACCCGACCCGACCCGACCCGACCAGTCAAATTGGTCACTTGACCCGTCCC
GACCAGTCAGATTTTCCGTCCCGGGTCATTGACCCGACTCGACCAGTCAG
ATTTTTCTATCCCAGGTCATTGACCCGACCCGACCCGACCCGTCATATTT
CAGATATGCCTGACCCGACCCGGGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTTTCTTCACATTAGCTAGTATAATCGAGATTGCTAGTTCC
AAAAATCTAGCAACTCACGGCCCGTGGTCACAGAAGTGCTACAGCCATCA
AAAGATCCGAAAAAGGAAATACGCAGATCCACCGGGCAAGGGTACACAAA
GCCGAGGAGGTACACCTATGAATATGCCGGTAAAAAACATATATGTATCC
TACTGAACCACGCATCCACGAATCTTCATTCGACTACAGAACTACGTTTC
ATGACCCGTAAACATGCCTGTTTTTTTGGAATTGTTTTGGTTGGTCGTAA
ACCCCAGAGTCGGGAGTCTGCATACCCAAGTAGACTTTTGATTCAACAAT
TTGCTGGCAGCTGAGACATGTCGTGCCCGACAGCTCGCCATTCCGGAATT
CTGGATATCCTGCGGTCTGGAGTTGCTCTCGCTCCGCTTCCATCAGCACC
TCCTCGATGGCTCTGGCTGCACACCCTTCACAGTAGTGCAATCCAAGCCT
TGTCATTCTCGCTCTCTCCCCCACGGTACAACTTCCTCTCTTCCCGTCTC
GGTCTCTGTTTGTTGCCATATTGCGGAACTTCGTATCAGTCTCTGCGTAA
ATTTGACTCTCGATTGAACGTCCGCTTTTTTTCGCCGGATGGTGAACGCG
CCGAGGGGGTCAAGCGCGAGCCGACGTGTACCCTGCGAGGCACTCTAGAT
GCACATTGTGTAATATGGTGCACACGGGTACACTTCTCGCGGCAGCACCA
TCAAATAAGGAGGGCACAGTAGTTCTGCTTGCACATCCTTTATGTGCACT
CTAATGCGGTCGCTGGTGGAAGCTGGCATTCGCCTCCTGTTGTGGTGGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTCTTCACATTAAAAAC
CGTTCCGATCTCACCATCCAGTACCTCCGTACGTCCGTACTAATCAAACA
CTCGACGCGGTCGATTCCTGTGGTCACAGGCTAACTTACCCTAAGAAAGG
GTATTGTACTGAAAAATAAAAAGGTAGACCCGAAGTGTTTAGCGCCGCTG
ATGACCCCAACGCGTGGTTTGCGAAGCCGGTTGGGAATCACCACTCCTAT
GAACTGTGTATTGACGCTGGCCTGGCCCGACCGAACGCCATCACGGGGAA
GGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGAAAAAAAAAAAAAAAAGG
GGGCGGCAAAGAGGGGGGTGTNNNNNNNNNNGGGGAGGGGAACCCGCCCC
GAACAAGGGGTTGTTGGGCGCGGGCCGCCCCCCCGCGAAGCCCCCGAGGG
GGGGGGGGGGGGGGGGGGGGGGGCAGCGCGGGCGTTGAACAACAAGATCA
AAGATAGGCGGCCAAAAGAGAGGTTTTGTCTGCTTGCGAAGCGGGATGGC
TTTCTCGTCGTCGTGCGACCGTGCGGCGCGCCCCAATCACAGCTCGCGCT
TCTTTCAGCTCGCGCTTCTTTCCCGTATCTGTTTCGTGACGGCGGCGTGT
CGGAATTCTTGAGCAGGCTCTTGAAGAGTACGAGACGACGAAGCGCTTGG
AGGAGGAGGAGTTTGAGTACGCGGTGTCTTCCGGCCTCGCCGGTGTAGAC
GGCAATGGCCAGGTGGGCACCTGTTAAATCATCAATCATCGGCCCGAAAT
CAGTAAGATCATACAACAACAGTATACAATAGAGCAAGCGGACCGGCCGG
CATGCGTGCTCTTGCCGTGAATGTAAGAGCATTTGCGAAAGGCAGAGAAA
CACGAGGGTGTTTGTTGAATTTTCGGTCCGGTTGACAGGACAGGATATTT
GTTGTTTGTTATCGTCTCGCTCCGCGTGACAACACCACGTGTCGACGGGG
CAAGGGTCGCGGAGGCACCCACGCCAGCAGTAGTGGCCGTCTCCGACGGC
TGTTGCATGCCTACACAGTCGGTCGCTGCCGAGATGTCGTTTGTGCGTGC
ACCTTTGCTGTTTTTGTTTTTTTTCGCTTCCCTATTTTTTTTTTCCTCCC
ATTATTGTTATTGCCACATTTGTCGTCTGCCCCACTGGCCCCATTCCGCT
TTCCTAATAATGTATCTCCTTCACAAAAGAGACAACAACTCTGCCACAAA
AATGCCTTTTTGCTGCAGGCCGACGCGGACGCGGTTCTGTGCCCCATCTG
CAAGCTGGACTACCTCGTCCAGGCCGGCCCGCCGTCGGACTCCATCGTCT
GCGCCTGCGGCTTCCGTCTCGACACCGCCGGCGACCGCCTCGGCCTCGAG
CACCTCAGGCAGCAGCTGGCGGAGACCTACGGCCAACACGGGTGAGCACG
ACGGCTGGCTGTTTTTTCGGTGTATGCCTAAATCCATGATCATGAAGGCG
CGTGTCTCTCTCTGTGTGTGTGTGTGTGTGTGCCTGTGTTTGTTTTTCTC
GCCTGTTTTTCTTTGTTCTTGAAAAGGGGCACATAAATAGCCAGGAAAAC
GTGCATGCATGCATGTATGTATATATGTACAGTATGTATGTACGGCGGCA
GTGTGTAGGCTTTTCGACCGCAGCGTTCGACTTGCGGCGATTCGATAACG
CTCGCCCTGCTGCTTTGGGCCAGGTTTTGCCCGGTTGTTGCCCGGTTGTT
GCCCGGTTGTTGCCCATCCGGCCGTCCGGCCATCCGTCGCTTCCACGGCG
CGCCTTTCGCCTTCGTGTTTTTCCTTGGTTGTGTATAATATGCGGGTGCC
CGTTTCCGTACTTGCCGTATCGGCACAACATTCGATGTAAACATACACGA
TGGCCAGGTGGTGCGTACATAGATGCGAAAGGATAAAAAAACACGCGTAC
AAGCACAGCGTCTGAGAAATTGTCGCATATGTTTTGGGCTAGAAACCTAA
TGTGAGAAACAACAACGTTGCACCAAAATCGTGATGGCTTTTTAACAGTT
ACCGAGACGTCGTTTTTAGGGTCATACTTACATACACATGCACGCATACG
TATACATACTTTCGAGTACCAACAGCAGTCCCTCTAGTTTTCTCGCTCCT
GATCATGCCGCTGCGTGCTTGCTTGGATGTGCGTGTCTTCTTCCATCCGC
ATCTGCAGTGCTGGTTGTAGCGCGGACCCCAGCTTTGCGCTGGAGGGCGC
ATCAGGATTGGACGTCCTTTGGAGCTCGTGCGAAGGGTGCGGCTTCGCTA
GAGTTGTCCTCTGAAGAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig2069:11777..16244-

>mRNA_L-elsbetiae_contig2069.6232.1 ID=mRNA_L-elsbetiae_contig2069.6232.1|Name=mRNA_L-elsbetiae_contig2069.6232.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1362bp|location=Sequence derived from alignment at L-elsbetiae_contig2069:11777..16244- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCACCAGCCTTCGAGAAGAGTGTCAAGGGTTTGTTGCGGGAGGGGA
AGGCGACGATGCTCTTATGGTGGACGATAGCAGAGGTGGAGAAGAGTTGA
CGTTACAGCAGAAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CCGGAGGCGATGGAGGGAGACGGGTTGGGGTGGGGTGACGATGGGGTGGA
GAGCTACAGCGACGAGGATCACATGCTATCGCCCGAGGAGTACCTGGAGA
TGATGCAGTACATCGAAGAGGCTTGCAAGGAGGAAGACCGATTGGCCGAG
GCTGAGATGTCCACCAGCCTTCGAGAAGAGTGTCAAGGGTTTGTTGCGGG
AGGGGAAGGCGACGATGCTCTTATGGTGGACGATAGCAGAGGTGGAGAAG
AGTTGACGTTACAGCAGAAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCCGGAGGCGATGGAGGGAGACGGGTTGGGGTGGGGTGACGATGG
GGTGGAGAGCTACAGCGACGAGGATCACATGCTATCGCCCGAGGAGTACC
TGGAGATGATGCAGTACATCGAAGAGGCTTGCAAGGAGGAAGACCGATTG
GCCGAGGCTGAGGCTCTTGAAGAGTACGAGACGACGAAGCGCTTGGAGGA
GGAGGAGTTTGAGTACGCGGTGTCTTCCGGCCTCGCCGGTGTAGACGGCA
ATGGCCAGGCTCTTGAAGAGTACGAGACGACGAAGCGCTTGGAGGAGGAG
GAGTTTGAGTACGCGGTGTCTTCCGGCCTCGCCGGTGTAGACGGCAATGG
CCAGGCCGACGCGGACGCGGTTCTGTGCCCCATCTGCAAGCTGGACTACC
TCGTCCAGGCCGGCCCGCCGTCGGACTCCATCGTCTGCGCCTGCGGCTTC
CGTCTCGACACCGCCGGCGACCGCCTCGGCCTCGAGCACCTCAGGCAGCA
GCTGGCGGAGACCTACGGCCAACACGGGCCGACGCGGACGCGGTTCTGTG
CCCCATCTGCAAGCTGGACTACCTCGTCCAGGCCGGCCCGCCGTCGGACT
CCATCGTCTGCGCCTGCGGCTTCCGTCTCGACACCGCCGGCGACCGCCTC
GGCCTCGAGCACCTCAGGCAGCAGCTGGCGGAGACCTACGGCCAACACGG
TGCTGGTTGTAGCGCGGACCCCAGCTTTGCGCTGGAGGGCGCATCAGGAT
TGGACGTCCTTTGGAGCTCGTGCGAAGGGTGCGGCTTCGCTAGAGTTGTC
CTCTGATGCTGGTTGTAGCGCGGACCCCAGCTTTGCGCTGGAGGGCGCAT
CAGGATTGGACGTCCTTTGGAGCTCGTGCGAAGGGTGCGGCTTCGCTAGA
GTTGTCCTCTGA
back to top