prot_L-elsbetiae_contig2068.6229.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2068.6229.1
Unique Nameprot_L-elsbetiae_contig2068.6229.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length328
Homology
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BLAST of mRNA_L-elsbetiae_contig2068.6229.1 vs. uniprot
Match: A0A6H5JLV2_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLV2_9PHAE)

HSP 1 Score: 369 bits (948), Expect = 5.520e-120
Identity = 206/279 (73.84%), Postives = 224/279 (80.29%), Query Frame = 0 
Query:   52 LLEERAREERRLQKIAEEAQEAQSGRGGGPGWMLAATGTGGNRVDVISPPLTKRGE--SKMKMTRVDGFNSTAGPSPKKSNQTELQFANRACIPVGEVPGVLDSLSSTPIFNSANCDERLALASRLRHWVVADGTYLIREGDGDRNRSAIFMIASGKATISLNIKVEGGSVQEVDIKDIKSPNYFGEGRVLGDSRAYASVRAKEELVVYYIMRADIEELVSPTTRALMERDMLVRKFQKENLDDLFAVIRQKPSGMQCLARFAEEQRMGGEVGFFMEVK 328
            +LEER REERRLQ I +     Q G G  P WM AA+               KRG   S+++MTRVDGFNS+ G SP+ S    L  A RACIP  EV  VL++LS T IFN+A   ERLALASRLRHWVVADGTYLIREGDGDRNRSAIFMIASGKATISLN  +EGGSVQEVDIKDIKSPNYFGEGRVLGDSRAYASVRAKEELVVYY+MRADIEELVSPTTRALMERDMLVRKFQKE+LDDLFAVIR+  SGM+CLARFAEEQRMGGEVGFF+EV+
Sbjct:    1 MLEERDREERRLQTIEDWELSGQRG-GPRPQWMPAASAGPXXXXXXXXXXGIKRGGAGSRLRMTRVDGFNSSVGFSPRNSKDRPL--AERACIPTTEVINVLENLSGTLIFNTATSQERLALASRLRHWVVADGTYLIREGDGDRNRSAIFMIASGKATISLNRTIEGGSVQEVDIKDIKSPNYFGEGRVLGDSRAYASVRAKEELVVYYLMRADIEELVSPTTRALMERDMLVRKFQKEHLDDLFAVIRKNCSGMKCLARFAEEQRMGGEVGFFIEVE 276
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BLAST of mRNA_L-elsbetiae_contig2068.6229.1 vs. uniprot
Match: D7FW12_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW12_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 6.990e-115
Identity = 187/233 (80.26%), Postives = 206/233 (88.41%), Query Frame = 0 
Query:   98 ISPPLTKRGE--SKMKMTRVDGFNSTAGPSPKKSNQTELQFANRACIPVGEVPGVLDSLSSTPIFNSANCDERLALASRLRHWVVADGTYLIREGDGDRNRSAIFMIASGKATISLNIKVEGGSVQEVDIKDIKSPNYFGEGRVLGDSRAYASVRAKEELVVYYIMRADIEELVSPTTRALMERDMLVRKFQKENLDDLFAVIRQKPSGMQCLARFAEEQRMGGEVGFFMEVK 328
            +SP  +KRG   S+++MTRVDGFNST G SP+  N+ +  FA RACIP  EV  VL++LS T IFN+A   ERLALASRLRHWVV DGTYLIREGDGDRNRSAIFMIASGKATISLN  +EGGSVQEVDIKDIKSPNYFGEGRVLGDS+AYASVRAKEELVVYY+MRADIEELVSPTTRALMERDMLVRKFQKE+LDDLFAVIR+  SGM+CLARFAEEQRMGGEVGFF+EV+
Sbjct:   15 VSPGGSKRGGAGSRLRMTRVDGFNSTVGFSPR--NRKDRPFAERACIPATEVIDVLENLSGTLIFNTATSQERLALASRLRHWVVEDGTYLIREGDGDRNRSAIFMIASGKATISLNRTIEGGSVQEVDIKDIKSPNYFGEGRVLGDSQAYASVRAKEELVVYYLMRADIEELVSPTTRALMERDMLVRKFQKEHLDDLFAVIRKNLSGMECLARFAEEQRMGGEVGFFIEVE 245
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BLAST of mRNA_L-elsbetiae_contig2068.6229.1 vs. uniprot
Match: A0A835ZII8_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZII8_9STRA)

HSP 1 Score: 178 bits (452), Expect = 8.080e-47
Identity = 93/175 (53.14%), Postives = 126/175 (72.00%), Query Frame = 0 
Query:  153 SLSSTPIFNSANCDERLALASRLRHWVVADGTYLIREGDGDRNRSAIFMIASGKATISLNIKVEGGSVQEVDIKDIKSPNYFGEGRVLGDSRAYASVRAKEELVVYYIMRADIEELVSPTTRALMERDMLVRKFQKENLDDLFAVIRQKPSGMQCLARFAEEQRMGGEVGFFMEV 327
            +L  T IF +A  +E++ LA RLR   V D  YLIREG+      AIFMIA+G+ATIS+  ++  G VQEVD+KD++ P+YFGEGR L + +A+ASVRAK+ LVVY ++RAD++ELVS  TRALM RD+ +R+FQ E++DDLF V+R    GM  L RFA EQ M G++ F+ E+
Sbjct:   55 ALQGTLIFKNATPEEKVLLAHRLRRMAVEDDAYLIREGEDCE--PAIFMIAAGRATISVTRELPDGGVQEVDVKDVRYPDYFGEGRCLTNEKAFASVRAKDGLVVYLLLRADMDELVSRRTRALMVRDLKIRRFQMEHVDDLFDVLRADARGMAFLCRFAAEQHMDGDLRFYNEI 227
[Close]
BLAST of mRNA_L-elsbetiae_contig2068.6229.1 vs. uniprot
Match: A0A836CGE9_9STRA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGE9_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.590e-19
Identity = 70/205 (34.15%), Postives = 101/205 (49.27%), Query Frame = 0 
Query:  151 LDSLSSTPIFNSANCDERLALASRLRHWVVADGTYLIRE---------------GDGDRNRS-AIFMIASGKATISLNIKV-EGGSVQEVDIKDIKSPNYFGEGRVLGDSRAYASVRAK---------------------------------------EELVVYYIMRADIEELVSPTTRALMERDMLVRKFQKENLDDLFAVIR 299
            L  L   P+F  A  DER  LA R+R   VA G  +IR                G+G R+ + AIFM+ SG AT+S+ ++V +GG   EVDI ++K P YFGEG VL    AYASVRA+                                       ++L++Y + + DI+ +    TRA M RD  VR+F+K++++DL+ +IR
Sbjct:  158 LAQLEKVPLFAEAKEDERKELAKRMRSLTVARGDNIIRARRHTLCHPATFTIFLGEGTRSANPAIFMMVSGAATVSIFVQVPDGGGTMEVDITELKPPEYFGEGTVLTGFPAYASVRARANDESSADAPVRARDNDYLKLTCLIVXXXXXXXXXXXXRDDLLLYVLPKTDIDMVTGADTRARMLRDHRVRQFRKQHMNDLWDIIR 362
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2068.6229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JLV2_9PHAE5.520e-12073.84Cyclic nucleotide-binding domain-containing protei... [more]
D7FW12_ECTSI6.990e-11580.26Cyclic nucleotide-binding domain-containing protei... [more]
A0A835ZII8_9STRA8.080e-4753.14Cyclic nucleotide-binding domain-containing protei... [more]
A0A836CGE9_9STRA1.590e-1934.15Cyclic nucleotide-binding domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 53..76
IPR000595Cyclic nucleotide-binding domainSMARTSM00100cnmp_10coord: 159..284
e-value: 0.0087
score: 25.3
IPR000595Cyclic nucleotide-binding domainPFAMPF00027cNMP_bindingcoord: 180..269
e-value: 3.6E-8
score: 33.3
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 159..272
score: 10.952
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 149..310
e-value: 2.6E-17
score: 64.7
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 152..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2068contigL-elsbetiae_contig2068:14916..21557 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2068.6229.1mRNA_L-elsbetiae_contig2068.6229.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2068 14916..21557 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2068.6229.1 ID=prot_L-elsbetiae_contig2068.6229.1|Name=mRNA_L-elsbetiae_contig2068.6229.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=328bp
MPTSKERGAKRPLRRNGSARSGQPPHSANAGPPNNQHPQAGRLSKRNNKY
FLLEERAREERRLQKIAEEAQEAQSGRGGGPGWMLAATGTGGNRVDVISP
PLTKRGESKMKMTRVDGFNSTAGPSPKKSNQTELQFANRACIPVGEVPGV
LDSLSSTPIFNSANCDERLALASRLRHWVVADGTYLIREGDGDRNRSAIF
MIASGKATISLNIKVEGGSVQEVDIKDIKSPNYFGEGRVLGDSRAYASVR
AKEELVVYYIMRADIEELVSPTTRALMERDMLVRKFQKENLDDLFAVIRQ
KPSGMQCLARFAEEQRMGGEVGFFMEVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000595cNMP-bd_dom
IPR014710RmlC-like_jellyroll
IPR018490cNMP-bd-like