prot_L-elsbetiae_contig20667.6227.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig20667.6227.1
Unique Nameprot_L-elsbetiae_contig20667.6227.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length41
Homology
BLAST of mRNA_L-elsbetiae_contig20667.6227.1 vs. uniprot
Match: D7G3D1_ECTSI (Rad21_Rec8_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3D1_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 2.540e-19
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0
Query:    1 MFYSQIILAKKGPLGKIWIAAHWDKKLNKAQIFQTNINTSV 41
            MFYSQIILAKKGPLGKIWIAAHWDKKLNKAQIFQTNINTSV
Sbjct:    1 MFYSQIILAKKGPLGKIWIAAHWDKKLNKAQIFQTNINTSV 41          
BLAST of mRNA_L-elsbetiae_contig20667.6227.1 vs. uniprot
Match: A0A7R9Y943_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y943_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 4.520e-16
Identity = 35/41 (85.37%), Postives = 40/41 (97.56%), Query Frame = 0
Query:    1 MFYSQIILAKKGPLGKIWIAAHWDKKLNKAQIFQTNINTSV 41
            MFYSQ+ILAKKGPLGKIW+AAHWDKKL KAQIFQT+I++SV
Sbjct:    1 MFYSQLILAKKGPLGKIWLAAHWDKKLTKAQIFQTDISSSV 41          
BLAST of mRNA_L-elsbetiae_contig20667.6227.1 vs. uniprot
Match: A0A2P4XFU8_9STRA (Double-strand-break repair protein rad21 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XFU8_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.540e-15
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 MFYSQIILAKKGPLGKIWIAAHWDKKLNKAQIFQTNINTSV 41
            MFYSQIILAKKGPLGKIW+AAHWDKKLNK QIF  +I+TSV
Sbjct:    1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIHTSV 41          
BLAST of mRNA_L-elsbetiae_contig20667.6227.1 vs. uniprot
Match: A0A2P4YM93_9STRA (Double-strand-break repair protein rad21 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YM93_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.570e-15
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 MFYSQIILAKKGPLGKIWIAAHWDKKLNKAQIFQTNINTSV 41
            MFYSQIILAKKGPLGKIW+AAHWDKKLNK QIF  +I+TSV
Sbjct:  185 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIHTSV 225          
BLAST of mRNA_L-elsbetiae_contig20667.6227.1 vs. uniprot
Match: A0A7S2S5L9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5L9_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.150e-15
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 MFYSQIILAKKGPLGKIWIAAHWDKKLNKAQIFQTNINTSV 41
            MFYSQIILAKKGPLGKIW+AAHWDKKL K QIFQT+I  SV
Sbjct:    1 MFYSQIILAKKGPLGKIWLAAHWDKKLTKVQIFQTDIERSV 41          
BLAST of mRNA_L-elsbetiae_contig20667.6227.1 vs. uniprot
Match: A0A662XSX1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XSX1_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 5.470e-15
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 MFYSQIILAKKGPLGKIWIAAHWDKKLNKAQIFQTNINTSV 41
            MFYSQIILAKKGPLGKIW+AAHWDKKLNK QIF  +I++SV
Sbjct:    1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSV 41          
BLAST of mRNA_L-elsbetiae_contig20667.6227.1 vs. uniprot
Match: A0A225X301_9STRA (Double-strand-break repair protein rad21 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X301_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 5.480e-15
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 MFYSQIILAKKGPLGKIWIAAHWDKKLNKAQIFQTNINTSV 41
            MFYSQIILAKKGPLGKIW+AAHWDKKLNK QIF  +I++SV
Sbjct:    1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSV 41          
BLAST of mRNA_L-elsbetiae_contig20667.6227.1 vs. uniprot
Match: H3GTZ6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTZ6_PHYRM)

HSP 1 Score: 75.9 bits (185), Expect = 5.480e-15
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 MFYSQIILAKKGPLGKIWIAAHWDKKLNKAQIFQTNINTSV 41
            MFYSQIILAKKGPLGKIW+AAHWDKKLNK QIF  +I++SV
Sbjct:    1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSV 41          
BLAST of mRNA_L-elsbetiae_contig20667.6227.1 vs. uniprot
Match: A0A6A3TN23_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TN23_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 5.480e-15
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 MFYSQIILAKKGPLGKIWIAAHWDKKLNKAQIFQTNINTSV 41
            MFYSQIILAKKGPLGKIW+AAHWDKKLNK QIF  +I++SV
Sbjct:    1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSV 41          
BLAST of mRNA_L-elsbetiae_contig20667.6227.1 vs. uniprot
Match: A0A0P1B0L1_PLAHL (Double-strand-break repair protein rad21 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0L1_PLAHL)

HSP 1 Score: 75.9 bits (185), Expect = 5.480e-15
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 MFYSQIILAKKGPLGKIWIAAHWDKKLNKAQIFQTNINTSV 41
            MFYSQIILAKKGPLGKIW+AAHWDKKLNK QIF  +I++SV
Sbjct:    1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSV 41          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20667.6227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3D1_ECTSI2.540e-19100.00Rad21_Rec8_N domain-containing protein n=2 Tax=Ect... [more]
A0A7R9Y943_9STRA4.520e-1685.37Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A2P4XFU8_9STRA1.540e-1585.37Double-strand-break repair protein rad21 n=1 Tax=P... [more]
A0A2P4YM93_9STRA1.570e-1585.37Double-strand-break repair protein rad21 n=1 Tax=P... [more]
A0A7S2S5L9_9STRA2.150e-1585.37Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A662XSX1_9STRA5.470e-1582.93Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A225X301_9STRA5.480e-1582.93Double-strand-break repair protein rad21 n=1 Tax=P... [more]
H3GTZ6_PHYRM5.480e-1582.93Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A3TN23_9STRA5.480e-1582.93Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A0P1B0L1_PLAHL5.480e-1582.93Double-strand-break repair protein rad21 n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006910Rad21/Rec8-like protein, N-terminalPFAMPF04825Rad21_Rec8_Ncoord: 1..41
e-value: 3.3E-15
score: 56.2
IPR039781Rad21/Rec8-like proteinPANTHERPTHR12585SCC1 / RAD21 FAMILY MEMBERcoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20667contigL-elsbetiae_contig20667:748..870 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20667.6227.1mRNA_L-elsbetiae_contig20667.6227.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig20667 748..870 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig20667.6227.1 ID=prot_L-elsbetiae_contig20667.6227.1|Name=mRNA_L-elsbetiae_contig20667.6227.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=41bp
MFYSQIILAKKGPLGKIWIAAHWDKKLNKAQIFQTNINTSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006910Rad21_Rec8_N
IPR039781Rad21/Rec8-like