|
Homology
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: D7FX58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX58_ECTSI) HSP 1 Score: 260 bits (664), Expect = 1.160e-85 Identity = 125/135 (92.59%), Postives = 131/135 (97.04%), Query Frame = 3
Query: 255 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSED 659
MFYLKEL+RPML+PPSDFGPK KDTIRRKLIEEVEGTSVGSLGFVITV +++DDQI MGTIEFDTGFANV+ VYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSED
Sbjct: 1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSED 135
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A835YX29_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX29_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.470e-50 Identity = 84/137 (61.31%), Postives = 104/137 (75.91%), Query Frame = 3
Query: 255 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMS--ITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAG-GYDPVGDMWVSSE 656
MFYLK LK+ +L+ P FGP + + R L+E+VEG S+G+ GFVI+V S + + MGTIE+DTG AN++ Y AICFRPF NEVLDA VS+VT+LGFFAEVGPLE+FVSR MP+DIA GYD VGDMWVS +
Sbjct: 1 MFYLKTLKKDLLLEPQFFGPNLHEVVGRLLLEQVEGMSLGNDGFVISVFSQNSANTSMEMGTIEYDTGAANIICTYEAICFRPFRNEVLDATVSNVTDLGFFAEVGPLEIFVSRFNMPEDIANTGYDSVGDMWVSED 137
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A6S9LV75_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LV75_HETAK) HSP 1 Score: 169 bits (428), Expect = 8.630e-50 Identity = 80/134 (59.70%), Postives = 100/134 (74.63%), Query Frame = 3
Query: 255 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 656
MF+LK+L R + +PP+ GPK K+TIRR+LIEEVEG +VG LG+VITV + D+ I G IE+D+GF VY AICFRPF +EVLDA +S VTELGFFA+VGPL VFVSR MP D+ GYDP ++W S +
Sbjct: 1 MFFLKQLTRELQLPPAFLGPKLKETIRRRLIEEVEGQAVGKLGYVITVTEMKDEAISQGLIEYDSGFVTFNVVYSAICFRPFRDEVLDATISSVTELGFFADVGPLTVFVSRHAMPADLQEGYDPARELWQSED 134
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A7S2Y2T3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2T3_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.900e-43 Identity = 75/134 (55.97%), Postives = 95/134 (70.90%), Query Frame = 3
Query: 255 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 656
MF+LKEL R +L+PP+ GPK K+TIRR+LIEEVEGT +G G+VITV + ++ + G I + G Y AICFRPF EVLDA V+ VTELGFFAEVGPL+VFVSR MP D+ G+D ++WVS +
Sbjct: 1 MFFLKELTRELLLPPAYLGPKIKETIRRRLIEEVEGTCLGKYGYVITVTEVKEEGMKTGVISNEFGEVIFHISYDAICFRPFKGEVLDANVTVVTELGFFAEVGPLQVFVSRHAMPQDLQEGFDAANEVWVSED 134
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A225WVR4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WVR4_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.600e-42 Identity = 73/134 (54.48%), Postives = 94/134 (70.15%), Query Frame = 3
Query: 255 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 656
MF+LK+L R +L+ P FGPK D IR +LIEEVEGTS+G G+VITV + D+ I G I+ ++GF YRAI FRPF N+VLDA V+ V +LGFFA+VGPL+VFVSR MP D+ GYD + W+S +
Sbjct: 1 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHESNAWISDD 134
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: K3XAJ8_GLOUD (Uncharacterized protein n=27 Tax=Oomycota TaxID=4762 RepID=K3XAJ8_GLOUD) HSP 1 Score: 150 bits (379), Expect = 1.970e-42 Identity = 73/134 (54.48%), Postives = 94/134 (70.15%), Query Frame = 3
Query: 255 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 656
MF+LK+L R +L+ P FGPK D IR +LIEEVEGTS+G G+VITV + D+ I G I+ ++GF YRAI FRPF N+VLDA V+ V +LGFFA+VGPL+VFVSR MP D+ GYD + W+S +
Sbjct: 1 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWISDD 134
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A024TU38_9STRA (Uncharacterized protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TU38_9STRA) HSP 1 Score: 149 bits (377), Expect = 3.840e-42 Identity = 74/134 (55.22%), Postives = 92/134 (68.66%), Query Frame = 3
Query: 255 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 656
MF+LK+LKR +L+ P FGPK D IR +LIEEVEGTS+G G+VI V + D+ I G I+ ++GF YRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR M D+ GYD W+S +
Sbjct: 1 MFFLKQLKRELLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGFVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWISQD 134
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A425DP05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DP05_9STRA) HSP 1 Score: 148 bits (374), Expect = 5.050e-41 Identity = 73/134 (54.48%), Postives = 92/134 (68.66%), Query Frame = 3
Query: 255 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 656
MF+LK+LKR +L+ P FGPK D IR +LIEEVEGTS+G G+VI V + D+ I G I+ ++G+ YRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR M D+ GYD W+S +
Sbjct: 1 MFFLKQLKRELLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGYVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWISQD 134
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A7S2HLJ0_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HLJ0_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.470e-40 Identity = 68/135 (50.37%), Postives = 92/135 (68.15%), Query Frame = 3
Query: 255 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDD-QIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 656
MF+ K+L+ +LI P GPK K TIRR+LI+E+EG+ + +G+V+ V I D I G IE++TG + + Y A+ FRPF NEVLDA V+ V +LGFF + GPL+VFVSR +P DI G+DP DMWVS +
Sbjct: 1 MFFYKKLRHEVLISPEYLGPKLKQTIRRRLIDEIEGSCINKIGYVVCVTDINDTTDIEAGLIEYETGHTSFMVTYGAVLFRPFKNEVLDATVTTVNQLGFFCKAGPLQVFVSRYNLPGDIREGFDPNQDMWVSED 135
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A024GUM2_9STRA (ING domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GUM2_9STRA) HSP 1 Score: 151 bits (381), Expect = 5.970e-40 Identity = 73/137 (53.28%), Postives = 95/137 (69.34%), Query Frame = 3
Query: 246 ITSMFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 656
+ +MF+LK+L R +L+ P FGPK D IR +LIEEVEGTS+G G+VITV + D+ I G I+ +G+ YRAI FRPF N+VLDA VS V +LGFFA+VGPL+VFVSR MP D+ GYD + W+S +
Sbjct: 262 LVNMFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDSSGYVCFNIRYRAILFRPFKNQVLDAVVSVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWISDD 398
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 261.5 |
Seed ortholog evalue | 2.1e-67 |
Seed eggNOG ortholog | 2880.D7FX58 |
Preferred name | POLR2G |
KEGG rclass | RC00003,RC00060,RC00181,RC00496,RC02795 |
KEGG ko | ko:K03015,ko:K09186 |
KEGG Reaction | R00435,R00441,R00442,R00443,R03875,R03938,R04866,R04867 |
KEGG Pathway | ko00230,ko00240,ko00310,ko01100,ko03020,ko04934,ko05016,ko05169,ko05202,map00230,map00240,map00310,map01100,map03020,map04934,map05016,map05169,map05202 |
KEGG Module | M00180 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000291,GO:0000375,GO:0000377,GO:0000398,GO:0000428,GO:0000932,GO:0000956,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003723,GO:0003727,GO:0003824,GO:0003899,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006352,GO:0006354,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006417,GO:0006446,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0008219,GO:0008380,GO:0008543,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009301,GO:0009452,GO:0009719,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010590,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0012501,GO:0016070,GO:0016071,GO:0016073,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0023052,GO:0030880,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031369,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032774,GO:0032991,GO:0033554,GO:0034062,GO:0034248,GO:0034250,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034660,GO:0035770,GO:0036260,GO:0036464,GO:0042221,GO:0042795,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045727,GO:0045935,GO:0045948,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051302,GO:0051716,GO:0055029,GO:0060147,GO:0060211,GO:0060213,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0061013,GO:0061014,GO:0061695,GO:0065007,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0080090,GO:0090304,GO:0097159,GO:0097393,GO:0097394,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1900151,GO:1900153,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902494,GO:1903311,GO:1903313,GO:1990234,GO:1990904,GO:2000112 |
EggNOG free text desc. | positive regulation of nuclear-transcribed mRNA poly(A) tail shortening |
EggNOG OGs | COG1095@1,KOG3298@2759 |
EC | 2.1.1.43 |
COG Functional cat. | K |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | br01611,ko00000,ko00001,ko00002,ko01000,ko03000,ko03019,ko03021,ko03036,ko03400 |
Exons | 5 |
Model size | 661 |
Cds size | 405 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815849.3378835-CDS-L-elsbetiae_contig2062:12247..12313 | 1622815849.3378835-CDS-L-elsbetiae_contig2062:12247..12313 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2062 12248..12313 - |
1691683144.5775936-CDS-L-elsbetiae_contig2062:12247..12313 | 1691683144.5775936-CDS-L-elsbetiae_contig2062:12247..12313 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2062 12248..12313 - |
1622815849.350698-CDS-L-elsbetiae_contig2062:13869..14058 | 1622815849.350698-CDS-L-elsbetiae_contig2062:13869..14058 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2062 13870..14058 - |
1691683144.5958292-CDS-L-elsbetiae_contig2062:13869..14058 | 1691683144.5958292-CDS-L-elsbetiae_contig2062:13869..14058 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2062 13870..14058 - |
1622815849.3630037-CDS-L-elsbetiae_contig2062:15149..15219 | 1622815849.3630037-CDS-L-elsbetiae_contig2062:15149..15219 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2062 15150..15219 - |
1691683144.6083686-CDS-L-elsbetiae_contig2062:15149..15219 | 1691683144.6083686-CDS-L-elsbetiae_contig2062:15149..15219 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2062 15150..15219 - |
1622815849.3799741-CDS-L-elsbetiae_contig2062:16189..16257 | 1622815849.3799741-CDS-L-elsbetiae_contig2062:16189..16257 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2062 16190..16257 - |
1691683144.6175487-CDS-L-elsbetiae_contig2062:16189..16257 | 1691683144.6175487-CDS-L-elsbetiae_contig2062:16189..16257 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2062 16190..16257 - |
1622815849.3905885-CDS-L-elsbetiae_contig2062:17397..17409 | 1622815849.3905885-CDS-L-elsbetiae_contig2062:17397..17409 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2062 17398..17409 - |
1691683144.6278307-CDS-L-elsbetiae_contig2062:17397..17409 | 1691683144.6278307-CDS-L-elsbetiae_contig2062:17397..17409 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2062 17398..17409 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815849.4022338-UTR-L-elsbetiae_contig2062:17409..17663 | 1622815849.4022338-UTR-L-elsbetiae_contig2062:17409..17663 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig2062 17410..17663 - |
1691683144.6383457-UTR-L-elsbetiae_contig2062:17409..17663 | 1691683144.6383457-UTR-L-elsbetiae_contig2062:17409..17663 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig2062 17410..17663 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2062.6216.1 >prot_L-elsbetiae_contig2062.6216.1 ID=prot_L-elsbetiae_contig2062.6216.1|Name=mRNA_L-elsbetiae_contig2062.6216.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=135bp
MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMS ITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFF AEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSED back to topmRNA from alignment at L-elsbetiae_contig2062:12248..17663- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig2062.6216.1 ID=mRNA_L-elsbetiae_contig2062.6216.1|Name=mRNA_L-elsbetiae_contig2062.6216.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5416bp|location=Sequence derived from alignment at L-elsbetiae_contig2062:12248..17663- (Laminarionema elsbetiae ELsaHSoW15) GTTCGGGCAAGGGGCAAGGAGGCGTAGGCCATTTACACCTGTACCCTTAC
GCACACAACCCTCTCTGATACAATATTTCTGGACTCTTCCTGGTTTCCAA
GGCAGGTGGATCTGTGTGAGACCAGAGGTCGCCCAGGGCACCAAAAAACA
CTCACTGGAGTGAGCGCAGAGAGGATAACCCATACGCAGCAGGCAGTGGT
CAGGTGCAGTGCGGGTAGATCGCGAGGAAGGCAGGCTTCAGCCCGATCAC
CAGCATGTTCTATCTTGTGAGTTACTGTATGTTGCTTCCCTCCTTGTTGC
GAGTTTGTTTGTTTGTTTGCTTGCTTGCTTGCAACCCGTACATACATATG
CAGTGTAGACTAGACGTAAATTTGAATTTTTGTACCTACTTCGCATGCGA
TGAATGATGAATCCAGCCGCGAGAGAGAAACGATCGGAGCATGGGAGCCT
TGTCCGTCTCCCCATGTTATACAAAAGCTTGTTGCTGTTGACATATATCC
AGTAGTTAACACGCGAACGTCCATGGATCACGCTCTGGAGAAAAGGTTCG
TGACAGCATCAAAACAAAGCTGCAGACAGAATTCCCCAGCAAACGACATG
GACCCTGTAGACTGCTTGCTGCCCCTTGCCCATCCACCGACAAGAGGCCT
CCCGGAATGCAGGCTGGGACACCACACCCTAGAAACATCGATAATACCAG
AATCGAGAGGGGTCTTAATATATATAGGATTTAGTATGGTCGTATACGTG
ACGTTAGTTACCACCCCCTCTCCTCCAATAAATCCGAGGGTCGGTGGGCC
CTGACGACGCCATATATAGGGTCATGACGACGCCATCCACACCAATTCCT
ATATAACAAACAAACATGGATAAGCCCACATTTTGGGTGTGTGGGGGAGG
GGAAGGGAGGGGTAGGGGGGGGGGGGGGGGGTGTCCCAGCCTGCATTCCG
GGAGGCCCCTTGTCACCGACGAGGAGGAGCACCGCAGAATGTTCCTGAGA
TCACCATATGGTCTGGTCCGGCTGAGACGCGTTGCGGGCTTCACTATAAG
TAATACACTTCAGAAGCATGAGGGGGCCGGTTGATGCCGCCTCATATTTG
AATTGAGGGCTATTATTCTCACCGCTGCTGCTTATATCTACTTTCCTTTG
ACAGGGGTTGCTAGTTTTTCGGTGATACATAGGTTGCCGCGCGAAAGGCG
GGCGACGCACGTCCGAATCTCCCGCATCCTCTTGCCCTGTGCCTTTCTTC
TTGTGTCTACCACGACCGTCGCTGACATCGAACAAGGAAGATTTGGTGTT
CAATTACTTATGCTCGTAGAATTGTCGCCGATCCCATCTACCGGCCTCCA
TTTGCTTGCTGCTGCTGCTGCTGCTGATGCCGCTGCTGCTCTGCCGCTCG
CTGCAGAAAGAGCTGAAGCGGCCGATGCTTATTCCGCCCTCGGACTTCGG
CCCAAAGTTCAAGGACACAATCCGGTGAGGAGAGAGGGTGAGAGGGGGGC
CCTTCCGTCTCAACGCGTATATATATATACTTCTATATATTTACAATTCG
TGAGCTGTGCGTGGCGTAGGCTCCCGCTACCTACTCTTTAAGCGCAGCCA
TTCTTTTGAAAAGGAGGTCATGATCTGTGGAGTAGGTGTGTGCTGGAGAC
TCCCCAGGGCCCCAGGTGCAATGGTGCGTGGTCTACGCTCTTCTGGCGCT
ACTATAATCTATGTAGTGTCCTCCAGAGAGGAATGCTTATACGTGAAGGA
AAGAGTAGCCTACATACTGCTTCCTTCGTTGCGCCAGTAAGCACGGGTGG
TGCTTTGGCATAATAAGCAGTCCCTCCTTTGATTGCACCACGACTCAAAT
TCCGGTTCATACCGACCTGTCTATCGTGGAACTAGGTACTAACTTGGAGA
CAACCTAACCTCCCATCTTCAAGAGAACAATCTCTGCTGAAAGAGGCCCT
GCATATGTATGTAGATCTCCGTAGATCTCCCCCAAGGCCCAGAAAAGTCC
TCCAGAAGTGCGATTCATAGATTACTGACGGAACTTCTTTCTGCTGGAAG
GCTTTTCTGGTCGCTGGTTTCAAAAACACGCTAAGGTTTGCAGCCGGCGG
CTGCAGTCCCCAGAGGCCTTCTTGGGACTGCTGGGCCGGCCACTTGCTGA
AGATGTTTATTTAAAAAAAAAAAAAAGTGCTGGTAAACGTGTGAGCACCC
GTAAGAAAAGAAACAAAAAGTGTTTTATCGTTTTTTGGAAGCTCGGATGG
AGTCCGTGCGCGGCAGAGTGTAATGGAGCATCGGTGATATCATTCATGCA
CATGTATGTACGTGTTGTTTCCGAGACATCCATCAACAGGTGGTCCGGAA
GGTCCAAGATGTTACGATTCCGGCACGCCTTGGCATCGACCCACTGCCTG
CTTGTGTTATATTTTTTATTATTCATCGTCGTCGTCGTCATCAGGCGAAA
GCTCATCGAGGAGGTGGAGGGGACGTCGGTAGGGTCTCTCGGGTTCGTCA
TCACCGTCATGTCGGTGAGTTTGAGACTATTTGTATCCATTCCGAAGATC
GACTGGAGTGATTCGCCCACAAGCGACGCAGGACGTCAGCAGAAGCAGGC
GCTTCGTCCGCTGGCGTGTTCCGAAACCTTAACTTCAAGTTTTAGTATAT
ACGAACAGCCAGCCACAAACCCCTTGCGGAGCCACATCCATGCGCAGAGC
CAAGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCGTTGAGCAA
TGCACTCCCGGCAAGCTCATGATGATGTACTTCTGCCAGACCCGCCGGGT
CCTGTGCTACGGCGGTTCGAGACTCGATGTCCGCAGCAATTCATGGTGGC
TTAAAATAGATTCGCCTCATATGTGCATGCACATCGGCGCACGACGTAAG
GTTGGGCGGCTCGGGTTCAAAGGATGGATGGAGTAAGAGGGGCGACTCGA
TCCCTGGATTGTTGTACTTACAATGTAGAGTGATCGAGACCAGCACGGCC
TCAGCGGGATTCTGTGTCCCCACACATACCCATTCATGACGCACGAACCC
CCCCCCAAAAACCGTTCACGTACATAGCCCTCAAGGATCCCGCCGACAGC
ATATATTTAATGCCTTTATGTAGTGCCACCTGACAGTAGTCCAGTCTAGA
CGAGAGGCTTAACTCTGCGGAACAAATTCGTCTTTTATTTATACAGATGT
AATCGGGTTCTTTAGTTGTTCCCGCTGGCCCCTTGGCAACGCTGGCTGGT
ATCTTGGCACATACTTCGCAACGCGTTTCGTTGGCTCTTTACATGATGTA
CCGTAGGTGACACTAGATACCACACACCCCGGACCGATTTTTAGAGCTCG
ATTACTCCGCAACGAAGATGCCAGCACCAAACTACACATTTTCGGACAGC
GCTGGACTAGATATTTCCAAAGCCGCCCATTTCGGCACTAGCACTCCTCT
TGCTAGGGAGGAATCGAGCTTTGAAAATCTGTCCAGGGGGTGTGGTATCT
TGTGTCACCTACTCCATGCATGCATGCGCACTCCCTGTTGGTGTCGTCCC
AAAAATTATTTACGCAACATATTTTTTCTTTCAAAACGCAAAATTTCACA
CACAGATTACCGACGATCAGATTCACATGGGCACCATAGAGTTCGACACC
GGCTTCGCGAACGTGGTGGCGGTGTACCGCGCCATCTGCTTCCGGCCTTT
CGTGAACGAGGTGCTGGACGCCGCCGTGAGCCACGTCACCGAGCTCGGCT
TCTTTGCGGAAGTAGGCCCGCTCGAAGTTTTCGTCTCTCGCCTGGTGAGT
CGACTCAGGCAGGCAGGCAGGCAGACAGGCAGGCAGGCAGGCAGGCAGGC
AGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGTAGGCAGGCAGGCAGGCAC
ACATGGCGATTCTTTCAAGAGAGGTTCTAAGAAACGCATGGGTGGCGGCA
GTGGAATGAAATGAGGGTTGGGGGTTTAAGGGCGCAGGTGCAGGGTGGGG
GGTAACGCAGGCAGGCAGGCGGGCAGGCGGGCAGGCAAGCAGGCGGCCGG
AGAGTAGACGGCGAGTTGAACCGGCGAGTAGGCGGCGAGTTGGGTTATGC
CTCAGCGCCGCGGCCTGGTGAGTCAAGTCAGGCAGGCAGGCAGGCAGGCA
GGCAGGAGGCCGGAAAGCAGACGGCGAGTTGAGCCGGCAAGCGCACGGCG
AGTTGAGTTATCCCTCTCCGCGCCGCGGCCTGGCGCGCCGCTCGGTGCTT
TATGTATTTAGCGGAGCTGGCCCTATGTTTTCAATTATTTTTCTTTTTTA
AGTTCCATGCTGCATGGATATGTTTGTAGTAAATTGCCAGCGGTCTCTGC
GGTACATGCATAGATACGTACATAGAAGCATGTAACGTAAAGTCTGACGT
GGTGAGAACGGTTGTACCAGAGAGGCTAGTGCTGTCGTTGCAGACCCGCT
AGTCCCCTCCTTCTTAACCGTCCCAGACTGCAGTGGCACATCGGGTTCAA
TTTTGTGAGCTCTTTCGGAGGTAGCCTCCGATCGGCAGGCACGCCGAAAA
AACGGAAAAAAACGGGATTACCTATGTAGTTTGTACTCGCTCACGTGGCT
GAGCGGATCATAGGGGTTCGTGGGTTGATGCCTGCCTTGCCCTATGTACC
ACAGATGACACAATATACCACCCCCCTGAACATATTTTCAAAGCACGATC
CCTCCGTAGCGAAGAGGGCGCCAGCACTAAGCGAAACATTTTCGGGCAGC
CCTCCTCGACTTTATTTAGAGTGGATTTTTCCAACGCCTCCCCATTTCGG
CACTGGCCCTCTCTCGCTGGGGAAGAATCGAGCTTTGAAAATCTGTTGCA
GGCGGGCGGGGGGGGGTATCTTGTGTCACCTGCGGTATGCTCTTCTTTGA
GTTTTTCACTCCCCCTTTTTGCGCATATCTCCTTCAGAGATGTTATCGCG
TTGTGGGACCGCACTCGCGTTGTTGGACCGCCTTCGCGAAGGATAATGAC
AGGGGTTCCGTAACCCTAACCCCAAACCGACCCCCCCCCTTAATCTAGCC
GTTTCCATACTTTTATCCCATATGATTTCTTCCAGTAAAACCTGCGAAGG
CTACTGGCGCTTTGTTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCTGNNNNNN
NNNNCTCCCTTTCTCTTCTTTTTTCCCCTCTGTTTTTTTCCCCGAAAACC
CCCAGGGGCGCCCCGCGCTCTTTTGCCCCCCCCCCCCCCCCCCCCAAACA
CACACACACACACACACTCTAAAATCCTTGGTTCTGCGTGGTATTGGCAG
GGTATGCCGGACGACATTGCCGGAGGCTACGACCCGGTGGGAGACATGTG
GGTCTCCTCGGAGGAC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig2062:12248..17663- >mRNA_L-elsbetiae_contig2062.6216.1 ID=mRNA_L-elsbetiae_contig2062.6216.1|Name=mRNA_L-elsbetiae_contig2062.6216.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=810bp|location=Sequence derived from alignment at L-elsbetiae_contig2062:12248..17663- (Laminarionema elsbetiae ELsaHSoW15) ATGTTCTATCTTATGTTCTATCTTAAAGAGCTGAAGCGGCCGATGCTTAT TCCGCCCTCGGACTTCGGCCCAAAGTTCAAGGACACAATCCGAAAGAGCT GAAGCGGCCGATGCTTATTCCGCCCTCGGACTTCGGCCCAAAGTTCAAGG ACACAATCCGGCGAAAGCTCATCGAGGAGGTGGAGGGGACGTCGGTAGGG TCTCTCGGGTTCGTCATCACCGTCATGTCGGCGAAAGCTCATCGAGGAGG TGGAGGGGACGTCGGTAGGGTCTCTCGGGTTCGTCATCACCGTCATGTCG ATTACCGACGATCAGATTCACATGGGCACCATAGAGTTCGACACCGGCTT CGCGAACGTGGTGGCGGTGTACCGCGCCATCTGCTTCCGGCCTTTCGTGA ACGAGGTGCTGGACGCCGCCGTGAGCCACGTCACCGAGCTCGGCTTCTTT GCGGAAGTAGGCCCGCTCGAAGTTTTCGTCTCTCGCCTGATTACCGACGA TCAGATTCACATGGGCACCATAGAGTTCGACACCGGCTTCGCGAACGTGG TGGCGGTGTACCGCGCCATCTGCTTCCGGCCTTTCGTGAACGAGGTGCTG GACGCCGCCGTGAGCCACGTCACCGAGCTCGGCTTCTTTGCGGAAGTAGG CCCGCTCGAAGTTTTCGTCTCTCGCCTGGGTATGCCGGACGACATTGCCG GAGGCTACGACCCGGTGGGAGACATGTGGGTCTCCTCGGAGGACGGTATG CCGGACGACATTGCCGGAGGCTACGACCCGGTGGGAGACATGTGGGTCTC CTCGGAGGAC back to top
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