mRNA_L-elsbetiae_contig2058.6204.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2058.6204.1
Unique NamemRNA_L-elsbetiae_contig2058.6204.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig2058.6204.1 vs. uniprot
Match: D7FJ40_ECTSI (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ40_ECTSI)

HSP 1 Score: 591 bits (1524), Expect = 3.290e-212
Identity = 294/302 (97.35%), Postives = 298/302 (98.68%), Query Frame = 1 
Query:    1 MSASAKVWIDENTKVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVAEAKESVKPDASVVYVPPPFAAAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIVMIGEIGGQAEEDAAEWLMEHGDPAKPVVSFIAGSTAPPGRRMGHAGAIISGGKGTAAAKFSALEDAGVYISRSPAQLGSTMVRAFEERGMAI 906
            MS+SAKVWID+NTKVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVAEAKE VKPDASVVYVPPPFA AAVLDAIENEIPLVVCITEGIPQKDMAKVKHAL+QQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGIGGDPFNGTNFIDCLERFT DPETEGIVMIGEIGGQAEEDAAEWLMEHGDPAKPVVSFIAGSTAPPGRRMGHAGAIISGGKGTAAAKF+ALEDAGVYISRSPAQLGSTMVRAFEERGM I
Sbjct:   21 MSSSAKVWIDQNTKVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVAEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALRQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGIGGDPFNGTNFIDCLERFTKDPETEGIVMIGEIGGQAEEDAAEWLMEHGDPAKPVVSFIAGSTAPPGRRMGHAGAIISGGKGTAAAKFAALEDAGVYISRSPAQLGSTMVRAFEERGMTI 322
[Close]
BLAST of mRNA_L-elsbetiae_contig2058.6204.1 vs. uniprot
Match: A0A7S0AIP9_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A7S0AIP9_9STRA)

HSP 1 Score: 508 bits (1307), Expect = 6.570e-179
Identity = 247/301 (82.06%), Postives = 275/301 (91.36%), Query Frame = 1 
Query:    1 MSASAKVWIDENTKVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVAEAKESVKPDASVVYVPPPFAAAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIVMIGEIGGQAEEDAAEWLMEHGDPAKPVVSFIAGSTAPPGRRMGHAGAIISGGKGTAAAKFSALEDAGVYISRSPAQLGSTMVRAFEERGMA 903
            MS++A VW+D+NTKVI QGFTGKQGTFH+ QAIEYG+  VGGVTPKKGGQTHLG PVFNTVAEA + V+PDASV+YVPPPF AAA++DAIENEIPLVV ITEG+PQ+DMAKVK AL  Q+ATRLIGPNCPGIIKPGECKIGIMPGYIH  GKIG+VSRSGTLTYEAV QTTVTG+GQSTCVGIGGDPFNGT+FIDCLERFTNDP+TEGI+MIGEIGG AEEDAAEWL EHGDP KPVVSFIAG TAPPGRRMGHAGAII+GGKG AA KF+ALE AGV+++RSPAQLG+TM++A +E G A
Sbjct:   38 MSSTANVWVDKNTKVICQGFTGKQGTFHSTQAIEYGTNMVGGVTPKKGGQTHLGLPVFNTVAEAVDGVQPDASVIYVPPPFCAAAIMDAIENEIPLVVAITEGVPQQDMAKVKKALSMQSATRLIGPNCPGIIKPGECKIGIMPGYIHTPGKIGVVSRSGTLTYEAVHQTTVTGLGQSTCVGIGGDPFNGTDFIDCLERFTNDPQTEGIIMIGEIGGSAEEDAAEWLKEHGDPNKPVVSFIAGMTAPPGRRMGHAGAIIAGGKGGAADKFAALEAAGVHVTRSPAQLGNTMLKAMQEAGKA 338
[Close]
BLAST of mRNA_L-elsbetiae_contig2058.6204.1 vs. uniprot
Match: F0YDA5_AURAN (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDA5_AURAN)

HSP 1 Score: 506 bits (1303), Expect = 9.670e-179
Identity = 245/301 (81.40%), Postives = 275/301 (91.36%), Query Frame = 1 
Query:    4 SASAKVWIDENTKVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVAEAKESVKPDASVVYVPPPFAAAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIVMIGEIGGQAEEDAAEWLMEHGDPAKPVVSFIAGSTAPPGRRMGHAGAIISGGKGTAAAKFSALEDAGVYISRSPAQLGSTMVRAFEERGMAI 906
            SASAKVWI++ TKVI QGFTGKQGTFH+EQA+ YG+  VGGVTPKKGGQ HLG PVF+TV +AK++V PDAS++YVPPPF  AA++DAIE EIPLVV ITEG+PQ+DM +VK+ L +Q+ATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIG+VSRSGTLTYEAV QTTVTG+GQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGI+MIGEIGG AEE+AAEWL  HGDP KPVV FIAG+TAPPGRRMGHAGAI+SGGKGTAAAKF+A EDAGV+ISRSPAQLGSTM++AF+E G  I
Sbjct:    6 SASAKVWINKETKVICQGFTGKQGTFHSEQALAYGTNVVGGVTPKKGGQEHLGLPVFDTVMDAKKAVNPDASMIYVPPPFCKAAIMDAIEAEIPLVVAITEGVPQQDMVEVKYHLTRQSATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVHQTTVTGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWLKAHGDPDKPVVGFIAGTTAPPGRRMGHAGAIVSGGKGTAAAKFAAFEDAGVFISRSPAQLGSTMIQAFKEHGKEI 306
[Close]
BLAST of mRNA_L-elsbetiae_contig2058.6204.1 vs. uniprot
Match: A0A8J2SSG9_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSG9_9STRA)

HSP 1 Score: 502 bits (1292), Expect = 6.340e-177
Identity = 242/302 (80.13%), Postives = 274/302 (90.73%), Query Frame = 1 
Query:    1 MSASAKVWIDENTKVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVAEAKESVKPDASVVYVPPPFAAAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIVMIGEIGGQAEEDAAEWLMEHGDPAKPVVSFIAGSTAPPGRRMGHAGAIISGGKGTAAAKFSALEDAGVYISRSPAQLGSTMVRAFEERGMAI 906
            +SA+AKVW+D NT+VI QGFTGK G+FH+EQAI YG+  VGGVTPKKGGQTHLG PVF++V EA + VKPDASV+YVPPPF  AA+LDAIENEI LVV ITEG+PQ DM +VK+ L++Q+ATRLIGPNCPGIIKPGECKIGIMPGYIH KGKIG+VSRSGTLTYEAV QTTV G+GQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGI+MIGEIGG AEE+AAEWL ++GDP+KPVV F+AG+TAPPGRRMGHAGA++SGGKGTA AKF A EDAGVYISRSPAQLG+TMV+AF+E G AI
Sbjct:   18 LSATAKVWVDANTRVICQGFTGKTGSFHSEQAIAYGTNMVGGVTPKKGGQTHLGLPVFDSVKEAVQEVKPDASVIYVPPPFCKAAILDAIENEIGLVVAITEGVPQHDMVEVKYHLERQSATRLIGPNCPGIIKPGECKIGIMPGYIHAKGKIGVVSRSGTLTYEAVHQTTVAGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWLKQNGDPSKPVVGFVAGTTAPPGRRMGHAGALVSGGKGTAQAKFEAFEDAGVYISRSPAQLGATMVKAFKEMGKAI 319
[Close]
BLAST of mRNA_L-elsbetiae_contig2058.6204.1 vs. uniprot
Match: A0A7R9ZLR7_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLR7_9STRA)

HSP 1 Score: 497 bits (1279), Expect = 8.060e-175
Identity = 241/294 (81.97%), Postives = 268/294 (91.16%), Query Frame = 1 
Query:    1 MSASAKVWIDENTKVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVAEAKESVKPDASVVYVPPPFAAAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIVMIGEIGGQAEEDAAEWLMEHGDPAKPVVSFIAGSTAPPGRRMGHAGAIISGGKGTAAAKFSALEDAGVYISRSPAQLGSTMVRA 882
            MS++AKVWID++T+VI QGFTGKQGTFH+EQAIEYG+  VGGVTPKKGGQTHLG PVFNTV EAK  VKPDASV+YVPPPF A A++DAIE EIPLVV ITEG+PQ++MA+VKHAL  QTATRLIGPNCPGIIKPGECKIGIMPGYIH+KGKIG+VSRSGTLTYEAV QTTV G+GQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGI+MIGEIGG AEE+AAEW+ E+GDP KPVV FIAG TAPPGRRMGHAGAI++GGKG AA KF ALE AGV++SRSPA+LG TM+ A
Sbjct:   23 MSSTAKVWIDKDTRVICQGFTGKQGTFHSEQAIEYGTNMVGGVTPKKGGQTHLGLPVFNTVEEAKTEVKPDASVIYVPPPFCAQAIMDAIEAEIPLVVAITEGVPQQEMARVKHALNTQTATRLIGPNCPGIIKPGECKIGIMPGYIHQKGKIGVVSRSGTLTYEAVHQTTVAGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWIKEYGDPNKPVVGFIAGMTAPPGRRMGHAGAIVAGGKGGAAEKFDALERAGVHVSRSPARLGVTMLEA 316
[Close]
BLAST of mRNA_L-elsbetiae_contig2058.6204.1 vs. uniprot
Match: A0A7S2LEI1_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LEI1_9STRA)

HSP 1 Score: 496 bits (1276), Expect = 2.140e-174
Identity = 241/294 (81.97%), Postives = 266/294 (90.48%), Query Frame = 1 
Query:    1 MSASAKVWIDENTKVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVAEAKESVKPDASVVYVPPPFAAAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIVMIGEIGGQAEEDAAEWLMEHGDPAKPVVSFIAGSTAPPGRRMGHAGAIISGGKGTAAAKFSALEDAGVYISRSPAQLGSTMVRA 882
            MSA+AKVWID++T+VI QGFTGKQGTFH+EQAI YG+Q VGGVTPKKGGQ HLG PVFNTVAEA E V+PDASV+YVPPPF A A++DAIE EIPLVV ITEG+PQ+DMA+VKH LK Q  TRLIGPNCPGIIKPGECKIGIMPGYIH  GKIG+VSRSGTLTYEAV QTT  G+GQSTCVGIGGDPFNGTNFIDCLERFTNDP+TEGI+MIGEIGG AEE+AAEWL EHGDP KPVV FIAG TAPPGRRMGHAGAII+GGKG AA KF+ALEDAGVY++RSPA+LG TM++A
Sbjct:   24 MSANAKVWIDKDTRVICQGFTGKQGTFHSEQAIAYGTQMVGGVTPKKGGQEHLGLPVFNTVAEAVEGVQPDASVIYVPPPFCAKAIMDAIEAEIPLVVAITEGVPQQDMARVKHMLKAQDKTRLIGPNCPGIIKPGECKIGIMPGYIHTPGKIGVVSRSGTLTYEAVHQTTTAGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPQTEGIIMIGEIGGTAEEEAAEWLKEHGDPNKPVVGFIAGMTAPPGRRMGHAGAIIAGGKGGAAEKFAALEDAGVYVTRSPAKLGETMLKA 317
[Close]
BLAST of mRNA_L-elsbetiae_contig2058.6204.1 vs. uniprot
Match: A0A1E7FEJ7_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FEJ7_9STRA)

HSP 1 Score: 495 bits (1274), Expect = 3.740e-174
Identity = 239/294 (81.29%), Postives = 270/294 (91.84%), Query Frame = 1 
Query:    1 MSASAKVWIDENTKVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVAEAKESVKPDASVVYVPPPFAAAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIVMIGEIGGQAEEDAAEWLMEHGDPAKPVVSFIAGSTAPPGRRMGHAGAIISGGKGTAAAKFSALEDAGVYISRSPAQLGSTMVRA 882
            MS++AKVW+D+NT+VI QGFTGKQGTFH+ QAIEYG+  VGGVTP KGGQ HLG PVFNTVAEA + +KPDASV+YVPPPF AAA++DAIE EIPLVV ITEG+PQ+DMA+VK+AL+QQ+ATRLIGPNCPGIIKPGECKIGIMPGYIH KGKIG+VSRSGTLTYEAV QTT+ G+GQST VGIGGDPFNGTNFIDCLERFTNDPETEGI+MIGEIGG AEE+AAEWL E+GDP KPVV FIAG+TAPPGRRMGHAGAI++GGKG AA KF ALE AGV+ISRSPAQLG+TM++A
Sbjct:   24 MSSTAKVWVDKNTRVICQGFTGKQGTFHSTQAIEYGTNMVGGVTPNKGGQEHLGLPVFNTVAEAVDELKPDASVIYVPPPFCAAAIMDAIEAEIPLVVAITEGVPQQDMARVKYALRQQSATRLIGPNCPGIIKPGECKIGIMPGYIHTKGKIGVVSRSGTLTYEAVHQTTIAGLGQSTVVGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGNAEEEAAEWLKEYGDPNKPVVGFIAGTTAPPGRRMGHAGAIVAGGKGGAAEKFEALESAGVHISRSPAQLGNTMLKA 317
[Close]
BLAST of mRNA_L-elsbetiae_contig2058.6204.1 vs. uniprot
Match: B7G0K7_PHATC (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0K7_PHATC)

HSP 1 Score: 493 bits (1269), Expect = 1.400e-173
Identity = 238/294 (80.95%), Postives = 267/294 (90.82%), Query Frame = 1 
Query:    1 MSASAKVWIDENTKVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVAEAKESVKPDASVVYVPPPFAAAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIVMIGEIGGQAEEDAAEWLMEHGDPAKPVVSFIAGSTAPPGRRMGHAGAIISGGKGTAAAKFSALEDAGVYISRSPAQLGSTMVRA 882
            MS++AKVW+D+N++VI QGFTGKQGTFH+ QAI+YG+  VGGVTPKKGGQ HLG PVFNTV EA + V+PDASV+YVPPP+AA A+LDAIE EI LVVCITEGIPQ+DMA+VKHAL+ Q  TRLIGPNCPGIIKPGECKIGIMPGYIH+ GKIG+VSRSGTLTYEAVWQTTVTG+GQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGI+MIGEIGG AEE+AAEWL E+GDP KPVV FIAG TAPPGRRMGHAGAII+GGKG A  KF ALE AGV++SRSPA+LG+TM+ A
Sbjct:    1 MSSTAKVWVDKNSRVICQGFTGKQGTFHSTQAIDYGTNMVGGVTPKKGGQEHLGLPVFNTVQEAVDGVQPDASVIYVPPPYAAQAILDAIEAEIGLVVCITEGIPQQDMARVKHALRLQDRTRLIGPNCPGIIKPGECKIGIMPGYIHRPGKIGVVSRSGTLTYEAVWQTTVTGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWLKEYGDPNKPVVGFIAGLTAPPGRRMGHAGAIIAGGKGGAEEKFQALESAGVHVSRSPARLGATMLEA 294
[Close]
BLAST of mRNA_L-elsbetiae_contig2058.6204.1 vs. uniprot
Match: A0A6U3SMJ6_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SMJ6_9STRA)

HSP 1 Score: 491 bits (1265), Expect = 1.010e-172
Identity = 239/294 (81.29%), Postives = 267/294 (90.82%), Query Frame = 1 
Query:    1 MSASAKVWIDENTKVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVAEAKESVKPDASVVYVPPPFAAAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIVMIGEIGGQAEEDAAEWLMEHGDPAKPVVSFIAGSTAPPGRRMGHAGAIISGGKGTAAAKFSALEDAGVYISRSPAQLGSTMVRA 882
            MSA+AKVW+D++TKVI QGFTGKQGTFH+ QAIEYG+  VGGVTPKKGGQTHLG PVFNTVAEA E V+PDASV+YVPPPF A A++DAIENEI LVV ITEG+PQ+DMA+VK ALK Q  TRLIGPNCPGIIKPGECKIGIMPGYIH  GKIG+VSRSGTLTYEAV QTTV G+GQSTCVGIGGDPFNGTNFIDCLERFTNDP+TEGI+MIGEIGG AEE+AAEWL E+GDP KPVV FIAG TAPPGRRMGHAGAII+GGKG A  KF+ALE+AGV+++RSPAQLG+TM++A
Sbjct:   27 MSANAKVWVDKDTKVICQGFTGKQGTFHSTQAIEYGTNMVGGVTPKKGGQTHLGLPVFNTVAEAVEGVQPDASVIYVPPPFCAGAIMDAIENEISLVVAITEGVPQQDMARVKAALKTQNKTRLIGPNCPGIIKPGECKIGIMPGYIHMPGKIGVVSRSGTLTYEAVHQTTVAGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPQTEGIIMIGEIGGSAEEEAAEWLKEYGDPNKPVVGFIAGMTAPPGRRMGHAGAIIAGGKGGANEKFAALEEAGVHVTRSPAQLGTTMLKA 320
[Close]
BLAST of mRNA_L-elsbetiae_contig2058.6204.1 vs. uniprot
Match: H3G957_PHYRM (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=26 Tax=Peronosporaceae TaxID=4777 RepID=H3G957_PHYRM)

HSP 1 Score: 482 bits (1240), Expect = 5.010e-169
Identity = 234/298 (78.52%), Postives = 267/298 (89.60%), Query Frame = 1 
Query:    1 MSASAKVWIDENTKVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVAEAKESVKPDASVVYVPPPFAAAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIVMIGEIGGQAEEDAAEWLMEHGDPAKPVVSFIAGSTAPPGRRMGHAGAIISGGKGTAAAKFSALEDAGVYISRSPAQLGSTMVRAFEER 894
            MSASAKVWI+++TKVI QGFTGKQGTFH++QAIEYG++ VGGVTPKKGG THLG PVFNTVAEAK+    DASV+YVPPPF AA++++AIE EIPLVV ITEGIPQ+DM KVK  L+ Q+ TRLIGPNCPGIIKPGECK+GIMPGYIH+KGK+GIVSRSGTLTYEAV QTT  G+GQST +GIGGDPFNGTNFIDCLERFTNDPETEGI+M+GEIGG AEE+AAEWLM HGDP KPVVSFIAG+TAPPGRRMGHAGAI+SGGKGTAA KF+ALE AGV ++RSPA+LG T+    ++R
Sbjct:   20 MSASAKVWINKDTKVICQGFTGKQGTFHSQQAIEYGTKMVGGVTPKKGGSTHLGLPVFNTVAEAKKETGADASVIYVPPPFCAASIIEAIEAEIPLVVAITEGIPQQDMVKVKWHLRNQSTTRLIGPNCPGIIKPGECKMGIMPGYIHQKGKVGIVSRSGTLTYEAVAQTTALGLGQSTVIGIGGDPFNGTNFIDCLERFTNDPETEGIIMVGEIGGSAEEEAAEWLMAHGDPNKPVVSFIAGTTAPPGRRMGHAGAIVSGGKGTAAGKFAALEAAGVAVTRSPARLGVTLFEEMKKR 317
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2058.6204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ40_ECTSI3.290e-21297.35Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S0AIP9_9STRA6.570e-17982.06Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
F0YDA5_AURAN9.670e-17981.40Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A8J2SSG9_9STRA6.340e-17780.13Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7R9ZLR7_9STRA8.060e-17581.97Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S2LEI1_9STRA2.140e-17481.97Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A1E7FEJ7_9STRA3.740e-17481.29Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
B7G0K7_PHATC1.400e-17380.95Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A6U3SMJ6_9STRA1.010e-17281.29Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
H3G957_PHYRM5.010e-16978.52Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2058contigL-elsbetiae_contig2058:9715..20845 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score591.3
Seed ortholog evalue2.6e-166
Seed eggNOG ortholog2880.D7FJ40
Preferred nameSCS-alpha
KEGG rclassRC00004,RC00014
KEGG koko:K01899
KEGG ReactionR00432,R00727
KEGG Pathwayko00020,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00009,M00011
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0004776,GO:0005488,GO:0005507,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006104,GO:0006105,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0010035,GO:0010038,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0031974,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042221,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046483,GO:0046686,GO:0046872,GO:0046914,GO:0050896,GO:0051186,GO:0055086,GO:0055114,GO:0070013,GO:0071704,GO:0071944,GO:0072350,GO:0072521,GO:1901135,GO:1901360,GO:1901564
EggNOG free text desc.succinate-CoA ligase (GDP-forming) activity
EggNOG OGsCOG0074@1,KOG1255@2759
EC6.2.1.4,6.2.1.5
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog descriptionSuccinate--CoA ligase (GDP-forming), alpha subunit
Ec32 orthologEc-10_000030.1
Exons7
Model size1039
Cds size909
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2058.6204.1prot_L-elsbetiae_contig2058.6204.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2058 9715..20715 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815848.2638366-CDS-L-elsbetiae_contig2058:9714..98281622815848.2638366-CDS-L-elsbetiae_contig2058:9714..9828Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2058 9715..9828 +
1691683143.794808-CDS-L-elsbetiae_contig2058:9714..98281691683143.794808-CDS-L-elsbetiae_contig2058:9714..9828Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2058 9715..9828 +
1622815848.2753026-CDS-L-elsbetiae_contig2058:14866..150251622815848.2753026-CDS-L-elsbetiae_contig2058:14866..15025Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2058 14867..15025 +
1691683143.8057837-CDS-L-elsbetiae_contig2058:14866..150251691683143.8057837-CDS-L-elsbetiae_contig2058:14866..15025Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2058 14867..15025 +
1622815848.286668-CDS-L-elsbetiae_contig2058:15619..157671622815848.286668-CDS-L-elsbetiae_contig2058:15619..15767Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2058 15620..15767 +
1691683143.8143103-CDS-L-elsbetiae_contig2058:15619..157671691683143.8143103-CDS-L-elsbetiae_contig2058:15619..15767Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2058 15620..15767 +
1622815848.2969055-CDS-L-elsbetiae_contig2058:16263..163621622815848.2969055-CDS-L-elsbetiae_contig2058:16263..16362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2058 16264..16362 +
1691683143.822902-CDS-L-elsbetiae_contig2058:16263..163621691683143.822902-CDS-L-elsbetiae_contig2058:16263..16362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2058 16264..16362 +
1622815848.3080711-CDS-L-elsbetiae_contig2058:16981..171151622815848.3080711-CDS-L-elsbetiae_contig2058:16981..17115Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2058 16982..17115 +
1691683143.8313916-CDS-L-elsbetiae_contig2058:16981..171151691683143.8313916-CDS-L-elsbetiae_contig2058:16981..17115Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2058 16982..17115 +
1622815848.318173-CDS-L-elsbetiae_contig2058:18056..182041622815848.318173-CDS-L-elsbetiae_contig2058:18056..18204Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2058 18057..18204 +
1691683143.839638-CDS-L-elsbetiae_contig2058:18056..182041691683143.839638-CDS-L-elsbetiae_contig2058:18056..18204Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2058 18057..18204 +
1622815848.3319733-CDS-L-elsbetiae_contig2058:20608..207151622815848.3319733-CDS-L-elsbetiae_contig2058:20608..20715Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2058 20609..20715 +
1691683143.8478484-CDS-L-elsbetiae_contig2058:20608..207151691683143.8478484-CDS-L-elsbetiae_contig2058:20608..20715Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2058 20609..20715 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815848.345775-UTR-L-elsbetiae_contig2058:20715..208451622815848.345775-UTR-L-elsbetiae_contig2058:20715..20845Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2058 20716..20845 +
1691683143.86523-UTR-L-elsbetiae_contig2058:20715..208451691683143.86523-UTR-L-elsbetiae_contig2058:20715..20845Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2058 20716..20845 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2058.6204.1

>prot_L-elsbetiae_contig2058.6204.1 ID=prot_L-elsbetiae_contig2058.6204.1|Name=mRNA_L-elsbetiae_contig2058.6204.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=303bp
MSASAKVWIDENTKVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQ
THLGKPVFNTVAEAKESVKPDASVVYVPPPFAAAAVLDAIENEIPLVVCI
TEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKK
GKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGIGGDPFNGTNFIDCLERF
TNDPETEGIVMIGEIGGQAEEDAAEWLMEHGDPAKPVVSFIAGSTAPPGR
RMGHAGAIISGGKGTAAAKFSALEDAGVYISRSPAQLGSTMVRAFEERGM
AI*
back to top

mRNA from alignment at L-elsbetiae_contig2058:9715..20845+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2058.6204.1 ID=mRNA_L-elsbetiae_contig2058.6204.1|Name=mRNA_L-elsbetiae_contig2058.6204.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=11131bp|location=Sequence derived from alignment at L-elsbetiae_contig2058:9715..20845+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCGCCTCGGCCAAAGTGTGGATAGACGAGAACACCAAGGTCATTGT
GCAAGGCTTCACTGGGAAGCAGGGCACCTTCCACGCCGAGCAGGCCATCG
AGTACGGCTCGCAGGTGAGAGGAAGTGGAATATATGCACGTTCTGGATTG
TCTCTTAGTTTGTCGAGCAAGGGCAACGCAGAAGAGCTGTCGAAAGTCGA
AACACCACAATGCCGGTTGCTTCTTCGTGTTATGTAGAGGGCACAGAAGA
CGAGAGAGAGCTGCGGCGTAGTCCTCGGGCAACAAAGGACAATAGCGGCA
TTTGCAGCATCAGTGTCCTCTCGGCTGCGCAGGTTGGCTTGAGTATACTG
CTAGTAATATATGGGTGAACCAGTCATGTGTGCTCGCCTTACGTCTACAG
CATCTGCACAACAGTTTGTGTGCAGATCGAGCGAGCGAGAAGCGCGTCGT
TGGGAAGCGAAGGTGAGGTTGACGTTTGCAGGAAGTTGTACAGCAGAGCA
CACGCACTACACGTACTAGACAACCCTTCCCACTATTGCGGTTGCTGCAT
GTCTCTATGGCGTTAGTGCAGTTTTCATCTTGCTCGTGGGTCCCCTCGGG
TTGAAGTCACGCGTGCACAACGGAGGCACTACTGCCGTTACAGCAGTGAC
AATATACCGCTGTGTGTTTGAAAGTCACCCGCCGGGGGTGTCCAACCACA
CGATAGAGTACAGTATCCGCAACGTCTTGGCGGTATTGTACGTTTTGTAC
CAACTCCTATCTCTAGTATGTAGCGGCTGTTGCGACTATTTGCCGCGGGC
ATCGGTACATAACCCGGGGACATGCATTTAACCGAATCTATCTATATATC
TACCGGTTTTAACCCGAAGTCCAAGTCGTAAGACACCCTGGACAATACCT
ACGATAGACAAATAGAGTGCTGTAAATCAATGCGATAGATTTCCCGCAAT
AGACAGCACTATTTATGTTGTCTGCAATGTGTATCGACGGACAAGTTATT
CTATTTATTGCCGCCTGCAGCGCCTACCGATGGCCTCCCTCCGAGCACTT
TTGCCCACACAGCATCTGCGGCTGCTTTGAACTGAAATACTCCTATATTG
ATGGTGGCAGTAACTATCGTAGATGGCTGCAACATCTATCGACAGATGGA
TTCTCGAATCTATTGATGGCCCCGATATCTATATCGATAGATAATTCTTC
GAATCTGTTGATGGTCACAATGCCTATCGATAGACACAAGCCCCACCGAA
GTTAGGTCTTGCTAGTATTTTGATTAGTTAGGTTAGGGGGCACCCGTGTG
ATAACAACCCCCCCCCCCCCACACCTCACTCCCTCCCCTCCATCGGGACA
TTGTATCTGCGGGGCCCCACGTAAAGTAAGAGGGCTACAGCAGTATACCC
CCCCCCCCATCCCTCGATTGCGGGTTTATGGAGGTTTCGAGGCTGTGGTT
CCAATCCTGCGATCCGGGCGCCCCCTTGCCTCTCCATCTTGCTCTCCATC
CCCATACATAACAAGAGCGCTCTCAGAGCCCTGAGGTATTTTTGTGTGTC
GATGAAAAGAGCTTATACCCTGGACAATAGACTTGTAATAGACTCTTGCT
GCTTCAATAGCCCCGAAGTTTGGCATGTTAATGCCCATTGCCATCTGCGA
GTGACTGGTTTGGCTGTCTATCGATATCTATTGAAGGCAACAATAGATTC
AGGGCAATGAATGTTGCAGAAATTGCGATAACAATAGAGTTAGAGTGGCC
AAGTCGTCTTTCGATATATGCTACTCGCTGCAATACACTATAGATTGTGA
CCACCGATATCTATTGCCGGTCTCGAAAGGATTTGAATCGCGGCCTTCCA
TATCTATTGCTGGCTTCAATAGAACCGAATCGCGGCCAACAACATGCATT
GCTGGTCGCAATGAGATCTGAAGTTGTCTGAACTGTGAATGTTGCCAAAA
TTGATATTCTTCGACGCATATTGCCGGACACAATACAAGGTGAATGGTGT
CCACCTCAAATGGGAATCCTTCAGTACAAAAATCAGCACGGGACGAAAAT
GCCACATCCGTGGGCGTTGAAGCTTTGTCGCTGTTGCTCTGCCAGTACGG
CACGGGGCGTGTGTGCGTGCATACAACGGAGCTGTATCGCGTGTGCGGCG
GTACTTGTAGACGGGTAGGTCTGGTATTAAGCCGCACACCAGCACCGGCT
CAATGCCTACATACATAGGGTAGTCCTACCTACCCCCATCCTGCGATGCT
GCGCTTCGGCGAGGCGTATTCTCGTGTTATCACACTGAAATGTTTACCTC
ATTGGTCGACCCGTTAGTACGCAAACACACACACGCACACAATCACCAAA
TTTGACTCCTCCGTTGGCGAAACATGAGTTGTCGAGAGAGGCAGAGAAGC
TGAACGCGAGAGTGGAGATTTTTCGCGCACGCACACCCCCTGTTGGATAC
CGGCGGCCATCCTAGCCAGCCGTACTCACGCTCTTTGTCCGGAGCTCGTT
GGTTCATTGTCTCTTGTCGACATCCGAAATCAACAAAAGCAGCAGTGTTT
TGCCGCGGGACTGCTGTGAAAACGAAAAAAAACACAAACCAAAATTTAGG
GTACGTATTTAACCTCTGAGCGAAAACCACCCACCATCCACCCTCTTACC
GCGATTGAGTCAACTCATCATTCGTCGAGGAGGGATATCATACACCAAAG
AGTTCCGAACAAAGAGCGCGAGTAAGCTGTCCGCATATTTGACTTCAGTT
CTGCTCTGGAAAAACTGATGAGGCACAGGGTGTGTGTGTCAAAAACAACT
TTTGTGGTATTTTTTGTCCCCCCACACGTGTTGCACCTCCCACAACAGAC
AAACACGACTCTTTTTTTTGTCCTCAGAAAATGACCCCACGCAACCCCCC
CAATTGATTTAACATACCAGAGAGCGCAGTTATTTAAGCGACTGCTGCAC
TACTGTAGATCCCTAATCAGCCAGGCGTCTAGAGGTTTCAGTATAAATAC
ATCAACAGAGTGCCGAAGTGGCAGATCGATTGGCCAAACACAGAGCTAGG
CGCTCCCGTCTAAAGTCACTCGATCGGACGCGGCGAAGGAGCGTTTTCCG
TTTTTTTTGGAGGAAGACAAGAGAGCGTGATTTGTTCTTCTGTTGATCAG
AGAGGTGGAGTCGGCTAGAGTTGATCCCTAATTATCTAGCCTTGTGTCCC
TTCTATGCTCACATATTTCTTTTGTACGGTCGCCGAGTTTCAAGCGATTT
GGTGCACTCCTGAGCTAGGCGCCCACCATCGAAATTGCTACCCAAGCTGC
GAGATTGAGCTGAAAAATACAGCAACTGCTGTTTCTGTCTAGCACCGGTC
ACTCAGCAGCTCTACTCTTCTAGGACAAATAACGGAATAAAGACTCCTTG
CGGACGTAGAGACTGAACATCTTGGGGCATCCCTCGCTTTTGGTTGCAAT
CGGTTGGGCGTGCCAGGAGCATCAGCGGTTACGATGTACACGACCGAGTG
GATTCCGAGCAAAGAAAAAAAGGGGGGGCGCAAGAAAACAAAAATCCCGC
TGAATTCGAACGCCTCGCATTTTGAAGACTTGTTGTTTTGTTGATCGGGG
CTGCAACACGTGTGCCCCACCCTGTCTCTTTCTCTCTTTTCACGCACTCA
CACGTGCGCGCGCTTTGGAACAACGACTCTAATCCTTGTGTGTATGCGAT
CAGCGCCATATCCAAGCACGACCAGTGAATCCATGCTGCCCTCCCGCCGT
CAGTGTTGTCTCGCTCCCCCCTCCTCCCTCCTCCTAGCGTTGGTGCCAGT
GTGTTACCTCCTTACCTGGAATTCGTGTGTGTGGTGTCCTGTTCGTTTCC
TCCTCATGCCTCCTTGTGAAACCCCGGGGCTGGGTCGTAATCGCCCCGAA
TCTCCGAATATATGTCGACAAAATACCGTCAAGCACGGCCATCTGTTGTC
GGAGCATAACTAAACCGGCGTGGCGAACAGTGCGTAATTTTTCTTCCCTC
TGAGGAGGCAACAGGTCGCCAATCGGTGCTCTGTACTTCTATCTGTAGAC
TTAGTTGTGGCCGAAAGGCCGGGTCATTTTCGATTCGATGGTCGTTGTTA
ATGGTTGGAGGGGTGCTATACGCGATAGGAGAAACCTAACCTTTTGGCCC
AAATATCTGGAGTTTTTTTTCCCCCCTGGGATGAGCTGGGATGAGGGGGG
AAAACAAATTGCGGCTTCGCCGCTCCGCGGCTCATTATAATTGAAGAATG
CTGCATCACGAACTCTTCAGAGTGCGCCGACAGTGATGTAGGATGTAGAT
ATTTGCTCGATGCTACATCTATATGTATCTATGAACAGCTGCTTGCTGTC
AGGTTTGCCACGTCTCGGATACGTAATATGTATGGTATGATTTTGTTTTT
TTCTTGTTTTCATTTCACATCTATTGCCAGCACCAGAGGCTCCGTGCCAC
GAAGGATTTTTTGCCAGAGTACTGACCCGTGGTCACACAGAAGGTTTCTC
TCCCTGAGCCCCCCACGCCCACCTTCTGCGGTGCTTGCCTAATTTTTTTT
TATCGCGAGAAGGGTTCAGCCATCCCTTTCCCTCGTCGACGGTGAGGTCG
AAGATTGTGACCTACCGTTTTCGTGCCCCCCGCTGACAACCCCGGGTGCG
AGGGGGCACCGTCAGTCGAAAAACACGGAACATTGCCGTGCCCAAGAGAA
GCCATATAACATCCCCGCCATTCTCTCGAAACCGTGTTGACCTTCCTGAG
TTTAGTAGCATGTAGGCACCGGTGTTGGAATCATGTTAAGAGGCGAGGTG
AGGTGGGGTCAAGAGGTGCTCTTACCCGGGCTCTCGCTTGCCCTCAAAGA
CTCAACACTCAAGACCGTTGGGCCTGGGGATGCGTGCATCACACGCCCCC
CCTGTTGTAAAGCACTCCTGTTGCCACTGCGCAGGTGTCCATGCGTGGGG
TTGTGCTGCCCGTATTTTTCCGCCTTCAGAGGACAAGATGTTTGTCATAC
ACGTCAACTCCACCCATTCACTCCTTCTCCTCATTCCGCTTGTCTTTGTT
TTTGTTCCTCTCGTTCACGCTGTCGGTGACGTGACGTGACGTGGCGTGGC
GTGGCGTGGCGTGGCGTGGCGTGGCATGGCGGGTCATGGCATGTGAAAAC
AGTACGTGGGTGGCGTTACTCCTAAAAAGGGCGGCCAGACGCACCTGGGG
AAGCCGGTGTTCAACACCGTCGCGGAGGCGAAGGAGAGCGTGAAGCCGGA
CGCTTCTGTGGTGTACGTGCCCCCACCGTTCGCGGCTGCGGCCGTGCTGG
ATGCGATTGAGGTATATATGTGTGGACTTCTATATACAGCAGTAGGAGGT
GCTTTGGTGTTTTGGTGAGTTGTTGCTTTGACGAGGCTGAACAGCAGTTG
GTTGGTCGTAGTACCCGGCACTCCACAACTGGGAGTTTTTCGTAAGTTGC
TACTTGCGTTTCGCCGTTGCGGGGCTAGGGCTAGACGCTCGCGCTACCCA
CGGACAGGGGCAGGGACAGCTTGCGGCGGAAGTTGGACGCCGTGCTGCCT
GCGACTTTATTTGTTCTCGCCTCCATCGCATGCCAATGGAGCTCTTCGTT
GTGTATTCTCAACATACATATCTTGATGATGGCGTGTCATCAATGCTTGG
CAGGGGAGGGCGAGGTGGTCAAACGATACCTACGTTACGGGACCCACAGG
ACGGCACTGCTATACTACTGTTTACCCGAGGTGGTAAAGCCGCCGCCAAT
CAAGGCGCACATCTCCTCAGAGGCATAACGCCACTTTCTCTCTTGCCCAC
TACTGTCCTCCTACCCCAGCACAGCTCTATCCCTATTTACTCCCGACCTT
CCCTTACCCTATCTTGCCCTCGCGGTGCGTGGCCTTTTGTGGCGTTCTTG
CGCAGAATGAGATCCCATTAGTGGTGTGCATCACGGAGGGTATCCCACAG
AAGGACATGGCGAAGGTCAAGCACGCCCTCAAGCAGCAAACCGCGACCCG
CCTCATCGGCCCTAATTGCCCCGGCATCATCAAGCCCGGAGAGTGCAAGA
TCGGTGAGATACTTTCGTGCGTGTTTCCCGCATTTTCATAACTGTGGTCG
TGGCCTTTCCCACTCCCACAACACTACAGCCACCTGGCAAAGCCCCAAGC
TTGCTTTCCGATGTTTTAACACGACAGGAAAATGGCATCTATGTAAGGTA
CGGGCGTTCTATCCACCCCTTTCTCTGGCTTCCGTGCGGCTGTCCGCCTT
CCTTTTCATATCGTACTACCCATGCCTTGTTGGTGTCACAAGCTTGATTG
TTGTTTTCCATCGGTGTGTGTCCCTATAAACACCCTTGACATTACGGTGG
TTTGTGTCACTACATATATCGTAGGGCTTTTCAGGAGTGTTGAGCGTGCC
TGAGGTCATTTGTGCCACCCGCCGCGGCACGCACGCCTTGCCGTTAGCGG
TCCTGCAGCTGCTATCCCGTTCGCTTGTCCCATTTTGATGTTCGGCAATG
GCGCGCACACCATAAAATACCATGCGCTTGTTGGTCCCCGTGTCTCTAGG
AATCATGCCCGGTTACATCCACAAGAAGGGCAAGATCGGCATCGTGTCAA
GGAGCGGGACGTTAACTTACGAAGCCGTGTGGCAGACTACCGTCACCGGT
GAGAGAGAGAGGTGTAGTGTAGACCCTCAGTATGCCAGAAAAGGTTATAT
GTAGTGCAAACGCGCGCCCGGCGTGAAGGCCACAGCTTTGACCTGCCTCC
CTCCTGCTCTGTGTAAGGTTGCGGCGTGAGCACGATTCTTCGGGCCTCAT
AGCTTTGCCCGTTTTTGTGTGACCCTGATCCGGAGTCTTGGATCGACCAC
CATCACTCGTTGGTTCACCTTCACCTGCAGTACAGCAGCGGCTTTGTCGT
GACAGACGGATGGATGCATAGTTCCATCATCAAGCCTGAATTTCGTGTCC
ATCATGCACAAAGCCGGAGCCATGCGCTGGTTAGTAAAGTAATAAATTGG
AGTACTTTGTACCCCGGAGTTTATCGTAGTTTGCGAGTCACCGCCATTGG
GCCGCTCTTGCCGCGTCATCGCTTTTTCTGTAATATTTTATATCCCCCGC
CTCATTTGTCTCGGAAACTATCTTTGTTCGAGGACCCCAGCGTATGTACC
GGCGTATGTACAGTCTGCATGGCCCCCTACCTTACCGTCTCTACCTTTGC
CGTCTTTTGACAATTTACTTTTGCGGCCTTTTTGCTCCGGACCATCTCCT
ACGAACGGCACTCCAAGGCATGGGTCAGAGCACCTGCGTAGGCATCGGGG
GTGATCCGTTCAACGGCACGAACTTCATCGACTGCCTGGAGAGGTTCACC
AATGACCCGGAGACGGAGGGCATCGTGATGATCGGAGAAATCGGAGGCCA
GGTATAGTATGCATCCACAGAGGGACCGATCAACTTGAGAAAACGCCCAT
GATAGCCCGATAACCCCTGCACCATGTAGAATGCCACTGATTTTACCATG
CCAATGCCTGATGCGCTTGCGTCTGTACTCTTGAATTAAGTTGTAAAATT
AAAAATTGTCTGTCTGTACGTGCGGACGCATAATGAACACAGATATAGAC
GACGTCGTTTTTTTTGTTTGTTCTTGGTTGTCCGTGCGAGCGGATTGCGG
ACTTTGTGCGAGTATATCTTGGGACCGGAAAAGGCTTGGTTGCCTACAAC
AGTCCCTCTGGAGCGAATTTTTCGCAGACTGGACGTAGACTGCTGACATT
TGTATACATCAATTAAAATGGAGCCCAAACAATTTTTTTCTTAAGTGGGA
CAGAGGTGCTGCCTGTGATGGGGATTGGCTGCATCGGTTCGGGTAGACTA
GAGACTTAGACTGAAGGAGAGATGAGGGTCGCTGCAACAGCTATTATTAC
AAATATTGCGTCTCGAGATGAGCGTCCGCTGCGAGCTTACGATTAATCTT
TAGGCCGTGGCATATTGTGCCTGGGATGGGATTGTGTAATGCTGGGATGG
GATTGTGTAATGGCATATTCCTTGTAATGTCGTGTGTGTTGTGCGTAGAA
CATGGTCGACTTGGCACTTGGCATGACTGATGTTTGTCCACCGGCGCCTG
GTCGATGACCCCTGCCAAAGATCCAAAAATGACCTGCTCCGACATGATTG
GATCGGTACTTTTAGATGAACATTCGCCTTGTCCCACATACTCCTATTTC
GTCTGGTTTTCCGCTCTAGAATACGCACGCAACACGGGTGTACGCATGCA
GACAGTGTTTACCTGGAAAGAGAGGAACAACGCCTCATTCCGCGTCTGCC
CACCGAATGCTATTATATGTAATGATGTGTCGCGTTTTCCAGGCGGAGGA
GGATGCGGCGGAGTGGCTGATGGAGCACGGGGACCCTGCTAAGCCGGTGG
TGAGCTTCATCGCTGGTTCTACGGCGCCCCCGGGAAGGCGCATGGGACAC
GCGGGAGCAATCATCTCAGGCGGCAAGGGCACAGCTGCCGGTGAGACATC
TTTATGAGGTTTTGAGATCTGTTCCATTTGCCCATATAAAGTGAACGTGA
CAAAGTAAGTTGGACGGACACTATTGTTGTGTTGTGTTGAGCCTCTTTAA
TTTTTTTGTCAGAAGTCGTCCGGCAACACGCAGCCATCCATTAGACATAA
TACGTGGTGAACGATATACATATAAGGTGTGGCCGCTAACGCGGCCCCGC
TTGATTGCAACCGAGCCTCCAAGGCATAGCTACATATATCTCCTGTGAAG
TACTCGATCGAGTACCTACCTGCTACATACATACATCTGTACTACGCTGC
TGCTGTTGTCGACATAAATCGGCAGCAGTTGCTCTTTGAACAATGCAACA
ATACTTCCGAAAAACATCCGTCAACAGGAGGAAGCAAATGGCTAGCTTCC
ACCAGCGACCGCATTGGAGTACATCCACGTAAAGGATGTGCAAGCAGAAT
TGTGGCCTCGTCATTTAACAGCGCTGACGCGAGAGTGTACCCGTGTGCAC
CATATTACACAATGTGCATTTAGAGTGACTCGCAGGGTGTACACGTTCGG
CTCGCGCTTGACCCCTTCGGCGCGCTACCATTCGGCGAATAAAAGCGGAG
TTTCACGCGAGTCAAATTTCCGAAATTTCCGAAGAAGTATTTCTGTAGAC
ATGGAAGATATTTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAA
AACTGCCCTTGTCTGGCGCTTACCCGGCCCCACTTTATGATTGAAGTCGA
TTCCAAGGCAATGATAAGTGTTTACTCCCTTCCTTGAAGTGATGCTGCTG
TTTTGAAAAGTAGATGTGTGTGACAATGGAAACACAAAACAGCAACGTTG
CAGTCAGTTTTTTTTATACTTCCGAAAAACACGCGTCGGCAGAAAGAGAG
GCCAATGCTGATGAATATTTATACTGTTCCCACCAGCGACCTCGTTTAGA
GTGCATCTAGAAAGGATGTGCGACCAGAGCTGCCCCCTCCTTGTATCTGA
CGGCGCTACAGCGAGTTTACTTGCGTGTGCACAACAATATACACATCTTA
ATGTGTACATGGTGGCAGTGCTTCACAGAGAGTACACATCCGGCTCGCAC
ATTAATCCCTTCGGAGAATGAACGGAATTGTGCAGATCAGAGTCAAATTT
CAAAAAAATAAAAATTGTCGAGCGTTGATTGAGCGTGTCAGACAAAGCAC
AGAGACGCTGTCGCGAGTGTACCCGTGTGCTCAACAAAATACATGCGTAC
ATAAAGTGTCTTGCAGGATGGTACATGCTTGGCTCACGCGTTGATCCCTT
CGGTGCGTTCACTGCTCGCGTCACGCTTGGCAAGGCAACTTTTCAAGCGA
GAGTCAAAATTCCAAATGCGATTGCTGAGATTACGTATGTACATTATAGA
GCGCGAGGAGGGACCCAGAGTGGTAGAGACAGAGGAGGATTGACAGTGGA
GGGCATGTAGCAGTAATCATTAGGGGGTGGTCAGAGAGAGAGAGAGAGAA
CTAGAAAGAGAGAGAAATAGAGAGAGAGAGGTGGATAGCGTTGAAGCCCT
TACCGAGCGAGTGGAGAAAGGTTTCAAGTCCAAAAAAGCGTCCCGACGAA
CAGCTCAGAATCCTGCTCTCACAGTGGCCTAAAAACGGAGATACTGCTCG
TACAGAGCCCGAAAAAATGAAAATTGGGCTCTTCTCAGACAAATGTTAAA
TCAGCGTGTTCAATTTGGGGTGAGCGTGCTTTTTGGTCCCACGGCAGAGA
GAGAAAACGCCGGCCTATCGAACACACGTTATTCAATACTTGTGTACGAC
CGCGGGGTGTGTCGACTTGAATTTCACAGCGCCAAGCTCTGGCTGCTGTT
AACCAAGCAGGTGAAGCGTTTTGCGCAAAGCACAGCTGTTTGTTTGTTTT
GGCGGACTATTTTGCTGCCCTTTTTGATCTGCTTGCGCCAGCCAACGCTG
AGGGTTTTGCCAACGCATCACCAATCTGTAACAAGTGCGGCGTAGGGCGG
AGATGTGCACGCAGGGATACACACCCACACCCGTCCCCTCAGCTCCGAGG
GTCACAGAGGCAGTTGACGTGAAATAAAGGTGCTCTGCTTTCTCTTCTCG
TGAAGCTTAAAGGGTCCCGTTGACGGAATCGCACCCTCGTGTTTTCTTCC
TGCGTCCCATGGTTTTTTACTGCGCATAAAAAGTCGCTCGTGTACGGCTA
AATTTCGCCGCCCACGCCGCAACGGCCTCCGTGGCTGTTCTAGCGCCAAG
CTTCATGACCCCATGTACTTCCGTTCCTCTCGCAAACCTGATCGCGGCAC
TCAAGATGGAACTGCACATCTTCCCTGCCCATCCTCCACGTTGTGCTCGT
GCTCACTTCTCACCCCGTCTGCTCATTGTTACTTACTTTTGCAGCTAAAT
TCTCGGCTCTGGAAGACGCCGGCGTGTACATCTCCAGGTCTCCTGCACAG
CTCGGCTCCACCATGGTGCGCGCGTTCGAGGAGAGGGGCATGGCCATCTA
ACCGTCTTGGACAGTTTCATTTCAGTTCAGAATGTTGGGAGGGGGGGGGG
GGGGGTTTGTGGGGACTGCGACAGCTTGTTGTCTTGTGGTGTGGGTGGTG
GGGTTGTGATGATAAGAGAGCGTGGCCATGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig2058:9715..20845+

>mRNA_L-elsbetiae_contig2058.6204.1 ID=mRNA_L-elsbetiae_contig2058.6204.1|Name=mRNA_L-elsbetiae_contig2058.6204.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1818bp|location=Sequence derived from alignment at L-elsbetiae_contig2058:9715..20845+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCGCCTCGGCCAAAGTGTGGATAGACGAGAACACCAAGGTCATTGT
GCAAGGCTTCACTGGGAAGCAGGGCACCTTCCACGCCGAGCAGGCCATCG
AGTACGGCTCGCAGATGTCCGCCTCGGCCAAAGTGTGGATAGACGAGAAC
ACCAAGGTCATTGTGCAAGGCTTCACTGGGAAGCAGGGCACCTTCCACGC
CGAGCAGGCCATCGAGTACGGCTCGCAGTACGTGGGTGGCGTTACTCCTA
AAAAGGGCGGCCAGACGCACCTGGGGAAGCCGGTGTTCAACACCGTCGCG
GAGGCGAAGGAGAGCGTGAAGCCGGACGCTTCTGTGGTGTACGTGCCCCC
ACCGTTCGCGGCTGCGGCCGTGCTGGATGCGATTGAGTACGTGGGTGGCG
TTACTCCTAAAAAGGGCGGCCAGACGCACCTGGGGAAGCCGGTGTTCAAC
ACCGTCGCGGAGGCGAAGGAGAGCGTGAAGCCGGACGCTTCTGTGGTGTA
CGTGCCCCCACCGTTCGCGGCTGCGGCCGTGCTGGATGCGATTGAGAATG
AGATCCCATTAGTGGTGTGCATCACGGAGGGTATCCCACAGAAGGACATG
GCGAAGGTCAAGCACGCCCTCAAGCAGCAAACCGCGACCCGCCTCATCGG
CCCTAATTGCCCCGGCATCATCAAGCCCGGAGAGTGCAAGATCGAATGAG
ATCCCATTAGTGGTGTGCATCACGGAGGGTATCCCACAGAAGGACATGGC
GAAGGTCAAGCACGCCCTCAAGCAGCAAACCGCGACCCGCCTCATCGGCC
CTAATTGCCCCGGCATCATCAAGCCCGGAGAGTGCAAGATCGGAATCATG
CCCGGTTACATCCACAAGAAGGGCAAGATCGGCATCGTGTCAAGGAGCGG
GACGTTAACTTACGAAGCCGTGTGGCAGACTACCGTCACCGGAATCATGC
CCGGTTACATCCACAAGAAGGGCAAGATCGGCATCGTGTCAAGGAGCGGG
ACGTTAACTTACGAAGCCGTGTGGCAGACTACCGTCACCGGCATGGGTCA
GAGCACCTGCGTAGGCATCGGGGGTGATCCGTTCAACGGCACGAACTTCA
TCGACTGCCTGGAGAGGTTCACCAATGACCCGGAGACGGAGGGCATCGTG
ATGATCGGAGAAATCGGAGGCCAGGCATGGGTCAGAGCACCTGCGTAGGC
ATCGGGGGTGATCCGTTCAACGGCACGAACTTCATCGACTGCCTGGAGAG
GTTCACCAATGACCCGGAGACGGAGGGCATCGTGATGATCGGAGAAATCG
GAGGCCAGGCGGAGGAGGATGCGGCGGAGTGGCTGATGGAGCACGGGGAC
CCTGCTAAGCCGGTGGTGAGCTTCATCGCTGGTTCTACGGCGCCCCCGGG
AAGGCGCATGGGACACGCGGGAGCAATCATCTCAGGCGGCAAGGGCACAG
CTGCCGGCGGAGGAGGATGCGGCGGAGTGGCTGATGGAGCACGGGGACCC
TGCTAAGCCGGTGGTGAGCTTCATCGCTGGTTCTACGGCGCCCCCGGGAA
GGCGCATGGGACACGCGGGAGCAATCATCTCAGGCGGCAAGGGCACAGCT
GCCGCTAAATTCTCGGCTCTGGAAGACGCCGGCGTGTACATCTCCAGGTC
TCCTGCACAGCTCGGCTCCACCATGGTGCGCGCGTTCGAGGAGAGGGGCA
TGGCCATCTAACTAAATTCTCGGCTCTGGAAGACGCCGGCGTGTACATCT
CCAGGTCTCCTGCACAGCTCGGCTCCACCATGGTGCGCGCGTTCGAGGAG
AGGGGCATGGCCATCTAA
back to top