prot_L-elsbetiae_contig2057.6202.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2057.6202.1
Unique Nameprot_L-elsbetiae_contig2057.6202.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length419
Homology
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BLAST of mRNA_L-elsbetiae_contig2057.6202.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 6.420e-6
Identity = 22/38 (57.89%), Postives = 30/38 (78.95%), Query Frame = 0 
Query:    6 CTHVGCAKRPLFGVAGTKTREFCGGHAKEGMVNLDSKK 43
            C H  C KRP +GVAG+K REFC  HA++GMVN+++K+
Sbjct:    4 CGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKR 41
[Close]
BLAST of mRNA_L-elsbetiae_contig2057.6202.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.520e-5
Identity = 22/38 (57.89%), Postives = 30/38 (78.95%), Query Frame = 0 
Query:    6 CTHVGCAKRPLFGVAGTKTREFCGGHAKEGMVNLDSKK 43
            C H  C KRP +GVAG+K REFC  HA++GMVN+++K+
Sbjct:   64 CGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKR 101
[Close]
BLAST of mRNA_L-elsbetiae_contig2057.6202.1 vs. uniprot
Match: D8LCI2_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI2_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 8.510e-5
Identity = 23/38 (60.53%), Postives = 27/38 (71.05%), Query Frame = 0 
Query:    6 CTHVGCAKRPLFGVAGTKTREFCGGHAKEGMVNLDSKK 43
            C H GC K   +GV GTK REFCG HAK GMV++ SK+
Sbjct:    6 CGHPGCGKHSSYGVKGTKEREFCGRHAKMGMVDVRSKR 43
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2057.6202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FI73_ECTSI6.420e-657.89EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JT00_9PHAE1.520e-557.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCI2_ECTSI8.510e-560.53EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2057contigL-elsbetiae_contig2057:17273..18529 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2057.6202.1mRNA_L-elsbetiae_contig2057.6202.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2057 16314..18663 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2057.6202.1 ID=prot_L-elsbetiae_contig2057.6202.1|Name=mRNA_L-elsbetiae_contig2057.6202.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=419bp
MPPRICTHVGCAKRPLFGVAGTKTREFCGGHAKEGMVNLDSKKCAHQGCS
TRPSFGIPGTKKREFCRVHAREGNVNICRKKCARQGCSKEQSFGVAGTKK
REFCGGHAKEGMTNLSSNKCAHRSCSKVPSFGVAGTKKREFCGGHAEEGM
ANLDNKECARRGCTKVPSFGVVGAKKREFCSGHAKDGMIYLANTNKCAHP
CCSKDPSYGVAGTRKREFCRGHAKNGMVCVRGKTCAHQGCSKRPSLGVTG
TRSPEYCKGHAVEGMINVTNKRCAQRGCTKYSSYGVPGTKKRNYCAGHAK
EGMVSLRAIADLANATVVKAEEVVLISGVVARNESGGMDSATVGNGRSKR
KGRASRQCSGDGGGGSTSSSSNSKRKGGKRARKAIDDDVVILEPEDQAAV
AEDKAKPRASVAIKPEQQ*
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