prot_L-elsbetiae_contig2055.6193.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2055.6193.1
Unique Nameprot_L-elsbetiae_contig2055.6193.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length200
Homology
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BLAST of mRNA_L-elsbetiae_contig2055.6193.1 vs. uniprot
Match: D8LK26_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK26_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 1.020e-60
Identity = 160/199 (80.40%), Postives = 171/199 (85.93%), Query Frame = 0 
Query:    1 MSPLHVAAFNGRTDIVGILLEGGADPNSVDEDRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRTPAERSTGPGVQSLLEAESYKSIPKNIAQIRKQTEALQLRVDTNESIFVQKAIAIKGLRIAIEEKDSEXXXXXXXXXXXXXXXXXXXXXMAAIEEIIKQAAEASQGGKRAVEQVLKGLIEKNTSKDGTCKIS 199
            M+PLHVA+FNGRTDIV +LL+              XXXXXXXXXXXXXXXXXXXXXXXXXXXX LGRTPAERSTG  VQ LLEAESYKSIPKNIAQIRKQTEALQLRVDTNESIFVQKAIAIKGLRIAIE+KDSE      XXXXXXXXXXXXXX M AIEEI+ QAAEASQGGKRAVEQVLKGLI+KNTS++GTC++S
Sbjct:  222 MTPLHVASFNGRTDIVRMLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGRTPAERSTGTSVQQLLEAESYKSIPKNIAQIRKQTEALQLRVDTNESIFVQKAIAIKGLRIAIEDKDSEIRALKRXXXXXXXXXXXXXXKMTAIEEIMNQAAEASQGGKRAVEQVLKGLIDKNTSREGTCRVS 420
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2055.6193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LK26_ECTSI1.020e-6080.40Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK26... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 122..170
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 2..112
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 1..28
e-value: 0.81
score: 18.7
coord: 32..61
e-value: 2.8E-6
score: 36.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..31
score: 13.785
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 32..64
score: 13.277
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..188
e-value: 1.1E-25
score: 92.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..72
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 2..63
e-value: 1.5E-12
score: 48.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..69
score: 26.655

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2055contigL-elsbetiae_contig2055:3420..7186 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2055.6193.1mRNA_L-elsbetiae_contig2055.6193.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2055 1429..7315 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2055.6193.1 ID=prot_L-elsbetiae_contig2055.6193.1|Name=mRNA_L-elsbetiae_contig2055.6193.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=200bp
MSPLHVAAFNGRTDIVGILLEGGADPNSVDEDRDTPLHYACSSGSVEIIT
MLLAKGADPTAADGLGRTPAERSTGPGVQSLLEAESYKSIPKNIAQIRKQ
TEALQLRVDTNESIFVQKAIAIKGLRIAIEEKDSEIRGLKRKVLQQDAEL
KALKTKMAAIEEIIKQAAEASQGGKRAVEQVLKGLIEKNTSKDGTCKIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom