mRNA_L-elsbetiae_contig2055.6193.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2055.6193.1 vs. uniprot
Match: D8LK26_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK26_ECTSI) HSP 1 Score: 316 bits (810), Expect = 3.890e-102 Identity = 236/313 (75.40%), Postives = 252/313 (80.51%), Query Frame = 3 Query: 3 GHEACVAYLLDAGADITATDEHDYTALHLAAYYGRVGVVALLLSRGANTSAVDDRGRIPKRLASRKEISNLLAAKETESKLGVDVIEAVERNDVAGVRNYIAGKGDLNQKGKNDMSPLHVAAFNGRTDIVGILLEGGADPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGRTPAERSTGPGVQSLLEAESYKSIPKNIAQIRKQTEALQLRVDTNESIFVQKAIAIKGLRIAIEEKDSEXXXXXXXXXXXXXXXXXXXXXMAAIEEIIKQAAEASQGGKRAVEQVLKGLIEKNTSKDGTCKIS 941 GHEACVAYLLD DRGRIPKRLASRKEISNLLAAKETESKLGVDVIEAVERNDVAG++++I+GKGDLNQKGKNDM+PLHVA+FNGRTDIV +LL+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LGRTPAERSTG VQ LLEAESYKSIPKNIAQIRKQTEALQLRVDTNESIFVQKAIAIKGLRIAIE+KDSE XXXXXXXXXXXXXX M AIEEI+ QAAEASQGGKRAVEQVLKGLI+KNTS++GTC++S Sbjct: 108 GHEACVAYLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRIPKRLASRKEISNLLAAKETESKLGVDVIEAVERNDVAGLKSFISGKGDLNQKGKNDMTPLHVASFNGRTDIVRMLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGRTPAERSTGTSVQQLLEAESYKSIPKNIAQIRKQTEALQLRVDTNESIFVQKAIAIKGLRIAIEDKDSEIRALKRXXXXXXXXXXXXXXKMTAIEEIMNQAAEASQGGKRAVEQVLKGLIDKNTSREGTCRVS 420
BLAST of mRNA_L-elsbetiae_contig2055.6193.1 vs. uniprot
Match: A0A8C5QEK4_9ANUR (Protein phosphatase 1 regulatory subunit 16A n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5QEK4_9ANUR) HSP 1 Score: 65.9 bits (159), Expect = 4.050e-8 Identity = 47/137 (34.31%), Postives = 66/137 (48.18%), Query Frame = 3 Query: 9 EACVAYLLDAGADITATDEHDYTALHLAAYYGRVGVVALLLSRGANTSAVDDRGRIPKRLASRKEISNLLAAKETESKLGVDVIE----AVERNDVAGVRNYIAGKGDLNQKGKNDMSPLHVAAFNGRTDIVGILLE 407 E V LLDAGAD+ A+D +T LH AA G + +V LL+ AN AV+ G +P L + + E + + IE A E VA +R + ++N ND S LH+A NG + +LLE Sbjct: 114 EEIVKLLLDAGADVNASDSELWTPLHAAATCGHLHLVELLIKHKANLLAVNSDGNMPYDLCEDDATLDHIETAMAEQGITQERIETARAATELQMVADIRRLVETGAEVNTPDTNDTSLLHIACANGYLEAAELLLE 250
BLAST of mRNA_L-elsbetiae_contig2055.6193.1 vs. uniprot
Match: A0A2V8EB51_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8EB51_9BACT) HSP 1 Score: 63.9 bits (154), Expect = 1.690e-7 Identity = 36/61 (59.02%), Postives = 41/61 (67.21%), Query Frame = 3 Query: 9 EACVAYLLDAGADITATDEHDYTALHLAAYYGRVGVVALLLSRGANTSAVDDRGRIPKRLA 191 EA V LLDAGADI A +E D+T LH AAY G +V +L+ RGAN A D RGR P RLA Sbjct: 430 EAAVKVLLDAGADINAVNEADFTPLHGAAYRGLNEIVQILVDRGANIDARDFRGRTPYRLA 490
BLAST of mRNA_L-elsbetiae_contig2055.6193.1 vs. uniprot
Match: A0A7K8TJV6_9AVES (PP16A phosphatase (Fragment) n=1 Tax=Nyctibius bracteatus TaxID=48426 RepID=A0A7K8TJV6_9AVES) HSP 1 Score: 60.5 bits (145), Expect = 1.410e-6 Identity = 49/146 (33.56%), Postives = 69/146 (47.26%), Query Frame = 3 Query: 6 HEAC-------VAYLLDAGADITATDEHDYTALHLAAYYGRVGVVALLLSRGANTSAVDDRGRIPKRLASRKEISNLLAAKETESKLGVDVIEAVERNDVAGVRNYIAGKGDLNQKGKNDMSPLHVAAFNGRTDIVGILLEGGADP 422 H+ C V LLDAGA + A D +T LH AA G +G+V LL+ RGA+ AV+ G +P L + + + A E + + IE + V+ AG DL+ + + LHVAA NG +LL A P Sbjct: 109 HQGCIDDAGDVVTALLDAGATVNARDTELWTPLHAAATCGHLGLVRLLIQRGADLLAVNSDGNMPYDLCEDEVTLDAIEAAMAEQGVTQEKIEEARGATMGDVQLLCAGA-DLDAPLCHGATLLHVAAANGYVAAAELLLRHRATP 253
BLAST of mRNA_L-elsbetiae_contig2055.6193.1 vs. uniprot
Match: A0A2E6ZVL4_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E6ZVL4_9BACT) HSP 1 Score: 59.7 bits (143), Expect = 3.870e-6 Identity = 39/91 (42.86%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 9 EACVAYLLDAGADITATDEHDYTALHLAAYYGRVGVVALLLSRGANTSAVDDRGRIPKRLA----------SRKEISNLLAAKETESKLGV 251 EA VA+LL+AGAD+ AT+E D+TALH A + G VV L+++GA+ A D RGR R+A S E + LLA ++ LG+ Sbjct: 416 EAAVAFLLEAGADVNATNEADFTALHGATFRGLNEVVEYLVAQGADIDARDFRGRTAYRMAEGAKQSFQFQSWPETAELLARLGADTSLGI 506
BLAST of mRNA_L-elsbetiae_contig2055.6193.1 vs. uniprot
Match: A0A6L7WRY3_9BACT (Uncharacterized protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L7WRY3_9BACT) HSP 1 Score: 58.9 bits (141), Expect = 6.870e-6 Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 3 Query: 9 EACVAYLLDAGADITATDEHDYTALHLAAYYGRVGVVALLLSRGANTSAVDDRGRIPKRLA 191 EA V LL+AGADI A +E D+TALH AAY G V+ L++ GA+ A D RGR P R+A Sbjct: 419 EAAVRILLEAGADINAANEADFTALHGAAYRGLNEVIEYLVAEGADIDARDFRGRTPYRIA 479
BLAST of mRNA_L-elsbetiae_contig2055.6193.1 vs. uniprot
Match: UPI001EE5B8EF (ankyrin-3-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5B8EF) HSP 1 Score: 58.9 bits (141), Expect = 8.150e-6 Identity = 40/124 (32.26%), Postives = 63/124 (50.81%), Query Frame = 3 Query: 48 ITATDEHDYTALHLAAYYGRVGVVALLLSRGANTSAVDDRGRIPKRLASRKEISNLLAAKETESKLGVDVIEAVERNDVAGVRNYIAGKGDLNQKGKNDMSPLHVAAFNGRTDIVGILLEGGAD 419 I +TD +D T L LAA YG V LL+ RGA+TSA DD R A R V ++ + ++ D+N +N+M+PL +AA++G+ +++G+L+E GA+ Sbjct: 123 INSTDNNDITPLMLAAGYGNQVVFHLLIERGADTSARDDTDRTILHWACRGG--------------NVKIVNGILTQNIV----------DINSNDRNEMTPLLLAAYHGKREVLGLLIEQGAN 222
BLAST of mRNA_L-elsbetiae_contig2055.6193.1 vs. uniprot
Match: UPI00138A6102 (ankyrin repeat domain-containing protein n=1 Tax=Pseudoxanthomonas taiwanensis TaxID=176598 RepID=UPI00138A6102) HSP 1 Score: 58.5 bits (140), Expect = 1.190e-5 Identity = 53/150 (35.33%), Postives = 66/150 (44.00%), Query Frame = 3 Query: 3 GHEACVAYLLDAGADITATDEHDYTALHLAAYYGRVGVVALLLSRGANTSAVDDRGRIPKRLASRKEISNLLAAK-------ETESKLGVDVIEAV---ERNDVAGVRNYIAGKGDLNQKGKNDMSPLHVAAFNGRTDIVGILLEGGADP 422 G V LL GAD ATD T LH AA GV ALL A A++ G P +A + N A+ E G + A E +D AGV+ + K + G+ + LH AA G DIVG+LLE GADP Sbjct: 279 GRPEAVMTLLANGADPRATDAEGNTPLHHAARSTDPGVAALLRDAAAELDALNRDGFSPLGVAC--AVGNWRLARFLLERGARPEPPGGQPALLAAAGTEEDDPAGVQLLLKFKAKVGTPGRGGRTALHEAALAGHADIVGVLLEAGADP 426
BLAST of mRNA_L-elsbetiae_contig2055.6193.1 vs. uniprot
Match: A0A7Z9TAK6_9BACT (Ankyrin repeat domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Z9TAK6_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 1.580e-5 Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 3 Query: 9 EACVAYLLDAGADITATDEHDYTALHLAAYYGRVGVVALLLSRGANTSAVDDRGRIPKRLA 191 EA V LL+AGADI AT+E D+TALH A++ G VV L+++GA+ +A D RGR RLA Sbjct: 398 EAAVKVLLEAGADINATNEADFTALHGASFRGLNEVVEFLVAKGADINARDFRGRTAYRLA 458
BLAST of mRNA_L-elsbetiae_contig2055.6193.1 vs. uniprot
Match: A0A5J9VMH1_9POAL (MSP domain-containing protein (Fragment) n=2 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9VMH1_9POAL) HSP 1 Score: 57.0 bits (136), Expect = 2.460e-5 Identity = 37/122 (30.33%), Postives = 59/122 (48.36%), Query Frame = 3 Query: 48 ITATDEHDYTALHLAAYYGRVGVVALLLSRGANTSAVDDRGRIPKRLASRKEISNLLAAKETESKLGVDVIEAVERNDVAGVRNYIAGKGDLNQKGKNDMSPLHVAAFNGRTDIVGILLEGG 413 + A D T LH AA G A+L+ GA+T AVD RGR P +A K ++ A E V+ A R DV + + ++ + + + + ++ LH+AA G D++ +L G Sbjct: 221 LAARDREGRTVLHAAAAAGEAEAAAVLVDMGADTMAVDARGRTPLDVAREKGYQEVVEALERWEL----VMTAARRGDVQSLESLLSKRTGVRGRDQYGLTALHLAAIKGHCDVIAMLTGSG 338 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2055.6193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2055.6193.1 >prot_L-elsbetiae_contig2055.6193.1 ID=prot_L-elsbetiae_contig2055.6193.1|Name=mRNA_L-elsbetiae_contig2055.6193.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=200bp MSPLHVAAFNGRTDIVGILLEGGADPNSVDEDRDTPLHYACSSGSVEIITback to top mRNA from alignment at L-elsbetiae_contig2055:1429..7315+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2055.6193.1 ID=mRNA_L-elsbetiae_contig2055.6193.1|Name=mRNA_L-elsbetiae_contig2055.6193.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5887bp|location=Sequence derived from alignment at L-elsbetiae_contig2055:1429..7315+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2055:1429..7315+ >mRNA_L-elsbetiae_contig2055.6193.1 ID=mRNA_L-elsbetiae_contig2055.6193.1|Name=mRNA_L-elsbetiae_contig2055.6193.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1200bp|location=Sequence derived from alignment at L-elsbetiae_contig2055:1429..7315+ (Laminarionema elsbetiae ELsaHSoW15)back to top |