mRNA_L-elsbetiae_contig2048.6171.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: A0A6H5JCU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU9_9PHAE) HSP 1 Score: 339 bits (869), Expect = 3.370e-108 Identity = 166/193 (86.01%), Postives = 177/193 (91.71%), Query Frame = 1 Query: 454 QVTPSFNGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYRLISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRLPEALGL 1032 +VTPSFNGGE I+REYYDDWMSGNSN AIVEKLFPEM +DQTALWK+KEEVYR IST MTPLPGLL FLD C+S GLAMILVTNAPRLDAVHTL +L LSDRF ETMVIGYECAR+KPHPDPYLEGLSR+GL ADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQ+RL+G IGGGICVSDYLDSRL ALG+ Sbjct: 127 KVTPSFNGGERISREYYDDWMSGNSNPAIVEKLFPEMLAEDQTALWKAKEEVYRKISTTMTPLPGLLKFLDCCQSEGLAMILVTNAPRLDAVHTLNILGLSDRFEETMVIGYECARAKPHPDPYLEGLSRLGLPADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQERLKGVIGGGICVSDYLDSRLYAALGV 319
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: D8LK30_ECTSI (Haloacid dehalogenase-like hydrolase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK30_ECTSI) HSP 1 Score: 330 bits (846), Expect = 2.520e-106 Identity = 162/193 (83.94%), Postives = 174/193 (90.16%), Query Frame = 1 Query: 454 QVTPSFNGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYRLISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRLPEALGL 1032 ++TPSFNGGE I+REYYDDWMSGNSN AIVEKLFPEM +DQTALWK+KEEVYR IST MT LPGLL FLD C+S GLAMILVTNAPRLDAVHTL +L LSDRF ETMVIGYEC R+KPHPDPYLEGLSR+ L ADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQ+RL+G IGGGICVSDYLDSRL ALG+ Sbjct: 22 KLTPSFNGGERISREYYDDWMSGNSNPAIVEKLFPEMLAEDQTALWKAKEEVYRKISTTMTLLPGLLEFLDGCQSEGLAMILVTNAPRLDAVHTLNILGLSDRFEETMVIGYECPRAKPHPDPYLEGLSRLDLPADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQERLKGVIGGGICVSDYLDSRLHAALGV 214
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: A0A835ZE39_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE39_9STRA) HSP 1 Score: 214 bits (546), Expect = 7.560e-61 Identity = 104/198 (52.53%), Postives = 136/198 (68.69%), Query Frame = 1 Query: 454 QVTPSFNGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYRLISTKMTPLPGLLAFLDRC------RSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRLPEALG 1029 ++ P NGG+PI + +Y +WMSGNSN I +LFP+MP Q +W KE +YR IST M PLPGL L+ C ++R +A I+VTNAPRLDA HT+EVL + +RF T+VIG ECAR+KPHP+PYLEGL R+GL+A C+AFEDS+NG SA +AGL+T GV G + G G+C++D+ D RL LG Sbjct: 93 EMRPDHNGGKPIDKAWYKEWMSGNSNAVITARLFPDMPLAQQEEMWDRKEALYRRISTAMAPLPGLARLLEWCDLEDDDKAR-IATIIVTNAPRLDARHTMEVLGIHERFGNTVVIGAECARAKPHPEPYLEGLRRLGLAARDCIAFEDSLNGCRSATAAGLFTVGVTTGLDEAALRGAGAGVCIADFTDERLWALLG 289
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: A0A2V3J516_9FLOR (Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J516_9FLOR) HSP 1 Score: 162 bits (411), Expect = 3.110e-42 Identity = 79/192 (41.15%), Postives = 114/192 (59.38%), Query Frame = 1 Query: 454 QVTPSFNGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYR-LISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRLPEAL 1026 ++ PSFNGG+PITRE+YD MSG N +V K+ P++P +QT LW++KE Y +IS ++P+ GL+ + RC+ G+ +VTNAP+ V T+ + +++ F +V+ EC KPHP PYL L G+SA +AFEDS +G SA+ AGL T G+ + G V DY D +L AL Sbjct: 46 ELIPSFNGGKPITREFYDSEMSGRQNPELVSKILPQLPLHEQTRLWQTKESRYEDVISKGVSPIAGLIELIKRCKQDGIITYIVTNAPKGTCVKTVSSIGITEYFGSHVVVAEECEYPKPHPAPYLRALELAGVSAKEAIAFEDSPSGTRSAIGAGLLTIGMRSTQSDETLRSFGAAFTVRDYNDPKLLSAL 237
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: W7TRE2_9STRA (Had family hydrolase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRE2_9STRA) HSP 1 Score: 157 bits (398), Expect = 8.510e-40 Identity = 76/162 (46.91%), Postives = 106/162 (65.43%), Query Frame = 1 Query: 454 QVTPSFNGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYRLISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSET-MVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGV 936 + P +N G P+ R +YD +SG++N IV L P P D LW +KE +YR S ++PLPG++ LD C + +LVTNAPR++ +HTL L L DRF ++ ++IG E AR KP PD Y EGL R+GL+A C+AFEDS +G++SAV+AG+ T V Sbjct: 100 KFAPEYNDGRPLERAFYDQKLSGSANEIIVPMLLPHWPQDRMEELWLAKEALYRERSANISPLPGVIRLLDWCTENKIGYVLVTNAPRVECLHTLHSLKLKDRFHDSKIIIGQEMARPKPFPDAYNEGLRRLGLAAKECIAFEDSFSGLASAVAAGIPTVAV 261
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: A0A6U0VYW9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VYW9_9STRA) HSP 1 Score: 157 bits (397), Expect = 9.110e-39 Identity = 88/182 (48.35%), Postives = 115/182 (63.19%), Query Frame = 1 Query: 487 ITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYR-LISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGV-GEGSQQRLEGAIGGGICVSDYLDSRLPEAL 1026 ITRE+YD MSG SN IV K+ P++ + Q +W KEE YR L S M GL AFL C S L I+VTNAPR DA+HTL +L L RF++ +VIG EC +KP P+PYLEGL ++GLSA C+AFEDS +G SA++A L T V S++ + G + V + D+RL E+L Sbjct: 196 ITREFYDKEMSGQSNEIIVPKVLPDLSPEQQRQVWVQKEEEYRRLTSDSMQRFEGLDAFLQWCDSNSLKTIVVTNAPREDAMHTLTMLGLFGRFAKHVVIGMECKEAKPSPEPYLEGLRKLGLSASQCIAFEDSPSGAKSAIAAQLRTVAVLSSRSEEEMVATHGCVMGVRRFDDARLLESL 377
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: A4RS77_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RS77_OSTLU) HSP 1 Score: 144 bits (362), Expect = 2.350e-35 Identity = 80/188 (42.55%), Postives = 114/188 (60.64%), Query Frame = 1 Query: 484 PITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYR--LISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFS-ETMVIGYECARSKPHPDPYLEGLSRIGLS--ADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRLPEALGL 1032 P+T EY+ + ++G SN I +L+P+ ++ A+ ++KE +R L + P GL A LD C +RG+ ++VTNAPR +A L L L + F E +VIG ECARSKP+PDPYLEGL R G+S +ACVAFEDS G +AV+A + T G+ + +G +CV D+ L EALG+ Sbjct: 60 PLTHEYFKENIAGGSNADIFARLYPDKSAEEHEAMAEAKEASFREALAREALQPAKGLRALLDACDARGVKTVVVTNAPRANAEAMLTQLGLREYFGDERLVIGTECARSKPNPDPYLEGLRRCGVSDAPEACVAFEDSPAGARAAVAANIPTVGILSSQSEETLARVGCCMCVDDFASPVLLEALGM 247
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: A0A1X6NWD3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWD3_PORUM) HSP 1 Score: 142 bits (358), Expect = 2.180e-34 Identity = 77/194 (39.69%), Postives = 112/194 (57.73%), Query Frame = 1 Query: 454 QVTPSFNGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVY-RLISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRLPEALGL 1032 ++ P FNGG+ ITRE+Y+ MSG N +++++ P++ + + +KE Y R + + L G A LD + G+ + +VTNAPR HTL L DRF +++G ECAR+KP PDPY++G + + +AFEDS +G++SAV+AGL T GVG G A G + DY D RL LGL Sbjct: 76 EMEPQFNGGKRITREFYNTRMSGRQNPVLLKEIMPDVSPERGVVIADTKERAYMRRTAGAIEALAGAAALLDVLAAAGVRLGVVTNAPREIMEHTLGEAALRDRFP-VVIVGDECARAKPFPDPYVDGCRALDVQPREAIAFEDSPSGITSAVAAGLLTIGVGTGHPPATLLAAGAAFVIHDYYDERLATVLGL 268
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: C1FHX1_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FHX1_MICCC) HSP 1 Score: 140 bits (353), Expect = 5.050e-34 Identity = 78/187 (41.71%), Postives = 113/187 (60.43%), Query Frame = 1 Query: 472 NGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYR-LISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIG-LSADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRLPEAL 1026 NGG PI +++ ++G +N I L+PE+ ++ A+W+ KEE +R L +TK+ LPGL L +RG+ + VTNAPR +A L L L D + E +VIG EC ++KPHPDPYLEG+ +G + A CVAFEDS G ++AV+AG+ T GV +G +CV ++ + RL AL Sbjct: 58 NGGVPIDDDFFHKHIAGRTNEDIFADLWPELSVPEREAMWEKKEEDFRALAATKLRRLPGLTELLAWIDARGIRKVAVTNAPRPNAELMLTSLGL-DGYFEHVVIGTECTKAKPHPDPYLEGMRLVGAVDASRCVAFEDSPAGAAAAVAAGIPTVGVTTSQPSSALEGVGVSLCVKNFAEERLMLAL 243
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: A0A3G7TUA9_9PSED (Beta-phosphoglucomutase n=29 Tax=Pseudomonas TaxID=286 RepID=A0A3G7TUA9_9PSED) HSP 1 Score: 137 bits (345), Expect = 2.540e-33 Identity = 76/198 (38.38%), Postives = 115/198 (58.08%), Query Frame = 1 Query: 421 DLTRLYCRCRQQVTPSFNGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYRLISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRL 1014 D +L+ QQ+ +G T + ++ +SG +N + LFP+ + A KE +R +S ++TP+PGLL LD R RG+ M +VTNAPR +A H L VL L DRF +++++ E R+KP P PYL GL +G SA+A +AFEDS+ G+++AV AG++T G+ A G + V D+ D +L Sbjct: 15 DTDQLHLLALQQLLLEEDG-RVFTHQEFEAHVSGQANANMCRYLFPQRSVAEHEAFADRKEARFRQLSPRLTPMPGLLRLLDFARERGIGMCVVTNAPRANAEHMLAVLGLGDRF-DSVLVAEELPRAKPDPLPYLTGLECLGASAEAGIAFEDSIPGLTAAVGAGIFTIGLATSQSPEALLAAGAHLVVEDFNDPQL 210 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2048.6171.1 >prot_L-elsbetiae_contig2048.6171.1 ID=prot_L-elsbetiae_contig2048.6171.1|Name=mRNA_L-elsbetiae_contig2048.6171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp MYDIFAQLCLYWRFYRNLWTMCVMNSAHLRNVHNRRESCDLTRLYCRCRQback to top mRNA from alignment at L-elsbetiae_contig2048:17822..20525- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2048.6171.1 ID=mRNA_L-elsbetiae_contig2048.6171.1|Name=mRNA_L-elsbetiae_contig2048.6171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2704bp|location=Sequence derived from alignment at L-elsbetiae_contig2048:17822..20525- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2048:17822..20525- >mRNA_L-elsbetiae_contig2048.6171.1 ID=mRNA_L-elsbetiae_contig2048.6171.1|Name=mRNA_L-elsbetiae_contig2048.6171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1494bp|location=Sequence derived from alignment at L-elsbetiae_contig2048:17822..20525- (Laminarionema elsbetiae ELsaHSoW15)back to top |