mRNA_L-elsbetiae_contig2045.6161.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2045.6161.1 vs. uniprot
Match: D8LU44_ECTSI (Calpain catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU44_ECTSI) HSP 1 Score: 479 bits (1232), Expect = 2.210e-160 Identity = 238/330 (72.12%), Postives = 276/330 (83.64%), Query Frame = 3 Query: 3 RYSVNVYCTDTFRLDRTPTAPEHQRTIMGAWDKSSAGGALGRPRFYTNPQFTLVLTQPKTRIHLEVRAPKDYQINATVVSEGGTRVDSVSSEREALTSGAYRQGFCYAEGVLSAGTYTVIVSTYKPGQIGGFAVKLCTTSPVRAPSRIPQEGEGMASKQLVHGRWREADGSAAGCGNFGRYLDNPRYLFAVPSRATLLLRVAVPEENSGALPGGRPAVNVTLFPTTREXXXXXXXXXXXXXXXXLQGAPPDRHHPGRITLDPRCKPTSASALASSNGGVYMDSSAGAVTEAVEVEAGEYVAVVSSFSPQEADFVLTIYSTPTLARVQRMM 992 RYSVNVYC+DTF+L TPTAPEH R+I+GAWD+SSAGGALGRP FYTNPQ+ +VLTQ KT++H+EVRAPKD+QINATVVS+GG R+DSVSSERE +T+G+YRQGFCYAE VL AGTYTVI STYKPGQ+ GF KLCTTSPVR P+RIPQEGEGM SKQ+V GRWR+ DG+AAGCGNFGRYLDNPRYLF VPSRA++LLRV +PE N+G P GRPAVN+TLFPTTRE +G GRI+L+P+C+PTS A+ASSNGGVYMDSSAGAVTE+VEVEAGEYVAVVSSF PQ+AD+ +TIY+TP LARVQR+M Sbjct: 223 RYSVNVYCSDTFKLYHTPTAPEHARSIVGAWDQSSAGGALGRPLFYTNPQYAVVLTQ-KTKVHIEVRAPKDFQINATVVSQGGMRIDSVSSEREVMTTGSYRQGFCYAENVLPAGTYTVIFSTYKPGQVAGFVAKLCTTSPVRPPTRIPQEGEGMTSKQVVRGRWRQDDGTAAGCGNFGRYLDNPRYLFTVPSRASILLRVVIPE-NAGPFPEGRPAVNITLFPTTREGGGDSTAGPPEDTGGMHRGV-------GRISLNPKCQPTSNLAIASSNGGVYMDSSAGAVTESVEVEAGEYVAVVSSFRPQKADYEITIYTTPALARVQRIM 543
BLAST of mRNA_L-elsbetiae_contig2045.6161.1 vs. uniprot
Match: D8LU46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU46_ECTSI) HSP 1 Score: 216 bits (550), Expect = 8.200e-60 Identity = 101/148 (68.24%), Postives = 125/148 (84.46%), Query Frame = 3 Query: 3 RYSVNVYCTDTFRLDRTPTAPEHQRTIMGAWDKSSAGGALGRPRFYTNPQFTLVLTQPKTRIHLEVRAPKDYQINATVVSEGGTRVDSVSSEREALTSGAYRQGFCYAEGVLSAGTYTVIVSTYKPGQIGGF-AVKLCTTSPVRAPSR 443 RYSV+VYCT+TFR+ +TPT+PEH++T++GAWD+SSAGGALG P FYTNPQ+ LVLTQP+T++H+EVRAPKD+QINATVVS+GG RVDSVS+EREA+ +G+YR GFCYA G+L AGTYTVI STYKPGQ+ V T P R P + Sbjct: 273 RYSVDVYCTNTFRVVQTPTSPEHEQTVLGAWDQSSAGGALGTPFFYTNPQYALVLTQPETKVHVEVRAPKDFQINATVVSQGGMRVDSVSNEREAMATGSYRMGFCYAGGILPAGTYTVIFSTYKPGQVSLHRTVPSVDTPPRRNPRK 420
BLAST of mRNA_L-elsbetiae_contig2045.6161.1 vs. uniprot
Match: A0A6H5KS09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS09_9PHAE) HSP 1 Score: 169 bits (427), Expect = 5.520e-46 Identity = 93/145 (64.14%), Postives = 109/145 (75.17%), Query Frame = 3 Query: 558 RYLFAVPSRATLLLRVAVPEENSGALPGGRPAVNVTLFPTTREXXXXXXXXXXXXXXXXLQGAPPDRHHPGRITLDPRCKPTSASALASSNGGVYMDSSAGAVTEAVEVEAGEYVAVVSSFSPQEADFVLTIYSTPTLARVQRMM 992 RYLF VPSRA++LLRV +PE N+G P GRPAVN+TLFPTTRE +G GRI+L+P+C+PTS A+ASSNGGVYMDSSAGAVTE+VEVEAGEYVAVVSSF PQEAD+ +TIY+TP LARVQR+M Sbjct: 18 RYLFTVPSRASILLRVVIPE-NAGPFPEGRPAVNITLFPTTREGAGNSSSGPPEDTGGMPRGV-------GRISLNPKCQPTSNLAIASSNGGVYMDSSAGAVTESVEVEAGEYVAVVSSFRPQEADYEITIYTTPALARVQRIM 154
BLAST of mRNA_L-elsbetiae_contig2045.6161.1 vs. uniprot
Match: W4G3V3_9STRA (Calpain catalytic domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G3V3_9STRA) HSP 1 Score: 158 bits (399), Expect = 6.060e-37 Identity = 105/320 (32.81%), Postives = 153/320 (47.81%), Query Frame = 3 Query: 6 YSVNVYCTD-TFRLDRTPTAPEHQRTIMGAWDKSSAGGALGRPRFYTNPQFTLVLTQPKTRIHLEVRAPKDYQINATVVSEGGTRVDSVSSEREALTSGAYRQGFCYAE-GVLSAGTYTVIVSTYKPGQIGGFAVKLCTTSPVRAPSRIPQEGEGMASKQLVHGRWREADGSAAGCGNFGRYLDNPRYLFAVPSRATLLLRVAVPEENSGALPGGRPAVNVTLFPTTREXXXXXXXXXXXXXXXXLQGAPPDRHHPGRITLDPRCKPTSASALASSNGGVYMDSSAGAVTEAVEVEAGEYVAVVSSFSPQEADFVLTIYS 959 Y+++V+ TD F L P P H+ +M AW ++AGG F NPQ+ LV+ R+ L + AP D IN +V G RV SVS + SG YR GFCY + + AG YT++ STY+P +G F++++ TSP +P EG M + G+W G+AAGC N+G+YL NP+YL VP + L R+ P LP ++NV+++ + P D PT+A +S G Y +S+ G T V G Y+ + S+F P+ DF L Y+ Sbjct: 724 YTLSVFSTDGPFELTDAPETPPHRINLMDAWTSATAGGCPKHATFLDNPQYQLVVESFMERMLLTLEAPVDLAINLRLVGGDGQRVGSVSKKSLRGQSGEYRPGFCYLDLDAVEAGLYTIVASTYEPQCMGSFSLQVAATSPQFQVFALPPEGHNMVPF-VCTGKWNPDAGTAAGCSNYGQYLQNPQYLLHVPVKCQLFFRLRPPRST---LPS-ECSINVSVYECS----------------------------PSGQLPDATANPTTA--FLTSAKGAYTNSTCGVRTPLAHVPPGYYLVIPSTFEPRRGDFDLHGYA 1008
BLAST of mRNA_L-elsbetiae_contig2045.6161.1 vs. uniprot
Match: A0A024TNA2_9STRA (Calpain catalytic domain-containing protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNA2_9STRA) HSP 1 Score: 155 bits (391), Expect = 6.190e-36 Identity = 107/323 (33.13%), Postives = 155/323 (47.99%), Query Frame = 3 Query: 6 YSVNVYCTD-TFRLDRTPTAPEHQRTIMGAWDKSSAGGALGRPRFYTNPQFTLVLTQPKT-RIHLEVRAPK--DYQINATVVSEGGTRVDSVSSEREALTSGAYRQGFCYAE-GVLSAGTYTVIVSTYKPGQIGGFAVKLCTTSPVRAPSRIPQEGEGMASKQLVHGRWREADGSAAGCGNFGRYLDNPRYLFAVPSRATLLLRVAVPEENSGALPGGRPAVNVTLFPTTREXXXXXXXXXXXXXXXXLQGAPPDRHHPGRITLDPRCKPTSASALASSNGGVYMDSSAGAVTEAVEVEAGEYVAVVSSFSPQEADFVLTIYS 959 Y+++V+ T+ F L P P H+ +M AW +AGG+ F NPQ+ LV+ R+ L + AP + IN +V G R+ SVS + SG YR GFCY E + AGTYT++ ST++P + G F++ + TS +P EG M + G+W G+AAGC N+G YLDNP++L V + L R+ GA +NV+L+P T G++ DP C PT+A +S G Y +S+ G T A + G Y+A+ S+F P DF L YS Sbjct: 709 YTISVFSTEGPFELTTAPEPPPHRIHVMDAWTTDTAGGSPKHATFVNNPQYQLVIDDASIERMLLTLEAPPAVELAINLRLVRGDGQRIGSVSKKSVRAQSGEYRPGFCYMEVEAVEAGTYTIVASTFEPHRTGSFSLTVAATSAAFQVLTLPPEGHNMIPF-VCSGKWNVEVGTAAGCSNYGHYLDNPQFLVHVMATCQLFFRL----RQRGAASS---TINVSLYPCTST---------------------------GQLH-DPHCNPTTA--FVTSAKGSYTNSACGVRTPAAQFPRGFYLAIPSTFDPHHGDFDLHGYS 993
BLAST of mRNA_L-elsbetiae_contig2045.6161.1 vs. uniprot
Match: A0A6H5KSF9_9PHAE (Calpain catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF9_9PHAE) HSP 1 Score: 142 bits (359), Expect = 6.130e-34 Identity = 70/95 (73.68%), Postives = 83/95 (87.37%), Query Frame = 3 Query: 105 SAGGALGRPRFYTNPQFTLVLTQPKTRIHLEVRAPKDYQINATVVSEGGTRVDSVSSEREALTSGAYRQGFCYAEGVLSAGTYTVIVSTYKPGQI 389 SAGGALG P FYTNPQ+ +VLTQ KT++H+EVRAPKD INATVVS+GG R+D+VSSERE +T+G+YR GFCYAE VL AGTYTVI STY+PGQ+ Sbjct: 263 SAGGALGSPLFYTNPQYAVVLTQ-KTKVHIEVRAPKD--INATVVSQGGMRIDTVSSEREVMTTGSYRPGFCYAENVLPAGTYTVIFSTYRPGQV 354
BLAST of mRNA_L-elsbetiae_contig2045.6161.1 vs. uniprot
Match: A0A485LM30_9STRA (Aste57867_22557 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LM30_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.420e-31 Identity = 71/189 (37.57%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 6 YSVNVYCTDT-FRLDRTPTAPEHQRTIMGAWDKSSAGGALGRPRFYTNPQFTLVLTQPKTRIHLEVRAPKDYQINATVVSEGGTRVDSVSSEREALTSGAYRQGFCYAE-GVLSAGTYTVIVSTYKPGQIGGFAVKLCTTSPVRAPSRIPQEGEGMASKQLVHGRWREADGSAAGCGNFGRYLDNPRYL 566 Y+++++ TD F L P P H+ ++G W S+AGG F NPQ+ L++ P + I + + AP + IN ++ +G RV S+S + SG YR GFCY E L +G YT++ ST++P IG F++++ +S +P EG+GM + V G+W + G+AAGC N+G YL+NP YL Sbjct: 692 YTISIFSTDEPFDLTIAPDPPTHRINLVGEWSASTAGGCPKYSTFLNNPQYQLIVQDPLSSILVTLEAPVHFAINIRLIRDG-QRVGSISKKHLVAQSGEYRPGFCYIEFSNLPSGEYTIVPSTFEPNCIGSFSLQIAASSAAYQVFTLPPEGDGMIELKCV-GKWNSSSGTAAGCSNYGHYLENPLYL 878
BLAST of mRNA_L-elsbetiae_contig2045.6161.1 vs. uniprot
Match: A0A165E0Z6_EXIGL (Cysteine proteinase n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165E0Z6_EXIGL) HSP 1 Score: 125 bits (314), Expect = 2.210e-26 Identity = 82/225 (36.44%), Postives = 114/225 (50.67%), Query Frame = 3 Query: 6 YSVNVYCTDTFRLDRTPTAPEHQRTIMGAWDKSSAGGALGRPRFYTNPQFTLVLTQPKTR---IHLEVRAPKDYQINATVVSEGGTRVDSVSSEREALTSGAYRQGFCYAEGVLSAGTYTVIVSTYKPGQIGGFAVKLCTTSPVRAPSRIPQEGEGMASKQLVHGRWREADGSAAGCGNFGRYLDNPRYLFAVPSRATLLLRVAVPEENSGALPGGRPAVNVTLF 671 ++ ++Y F L P H R I GA+ +AGG+ F NPQ+ L L K R + L V KD +N + G R+ +S AL SG YR G + E + AG YTVIVS++KP ++G F + + + P A IPQEG GM S L G W EA +A G + GRY NP Y +P++ATLL R+ + A A+N+T+F Sbjct: 506 FTFSIYSNRGFTLSHAPPKALHTRRIEGAFTSKTAGGSPLSATFMNNPQWALRLDATKNRKVELRLSVEGSKDLSLNVKAMWGSGKRITDISEGDVALDSGTYRYGLAFGEKSVQAGDYTVIVSSFKPKELGAFLLTVECSVPF-ALEPIPQEGSGMYSTALK-GSWTEA--TAGGSPSSGRYHLNPVYDLHLPTQATLLARLQLASRPPNA------ALNITIF 720
BLAST of mRNA_L-elsbetiae_contig2045.6161.1 vs. uniprot
Match: A0A066W7T1_TILAU (Cysteine proteinase n=1 Tax=Tilletiaria anomala (strain ATCC 24038 / CBS 436.72 / UBC 951) TaxID=1037660 RepID=A0A066W7T1_TILAU) HSP 1 Score: 116 bits (291), Expect = 1.650e-23 Identity = 96/303 (31.68%), Postives = 145/303 (47.85%), Query Frame = 3 Query: 72 QRTIMGAWDKSSAGGALGRPRFYTNPQFTLVL----TQPKTRIHLEVR-APKDYQINATVVSEGGTRVDSVSSEREALTSGAYRQGFCYAEGV-LSAGTYTVIVSTYKPGQIGGFAVKLCTTSPVRAPSRIPQEGEGMASKQLVHGRWREADGSAAGCGNFGRYLDNPRYLFAVPSRATLLLRVAVPEENSGALPGGRPAVNVTLFPTTREXXXXXXXXXXXXXXXXLQGAPPDRHHPGRITLDPRCKPTSASALASSNGGVYMDSSAGAVTEAVEVEAGEYVAVVSSFSP-QEADFVLTIYS 959 Q+++ AW SAGG+ F NPQ+ + + P + + + +R A +D ++A +V G RV S+S +SGAY Y E + G YT+++STY+PGQ + +++ +S V S IPQEG GM ++ W+ G+AAG + GRY NPR+L + S + L R+ V SGA P RP +NV++F RHH I++ A + G Y D+ G + + +EAGEYV V S++ P EA FVL Y+ Sbjct: 550 QQSLEDAWSGKSAGGSSLHASFMHNPQYAVQVHPDNLNPASCLLVTLRSARQDLLLSAQLVWGSGMRVTSLSQGDLVASSGAYDNRIVYCESTAVKPGKYTLVLSTYEPGQEAEYTLQVACSSRVDITS-IPQEGSGMFARSS-RSAWKVLAGTAAGSPSHGRYECNPRFLLQLSSAGSFLARLQV---GSGARP--RPPINVSVF----------------------------RHHAPTISI--------ALGAQVATSGPYDDALCGVMIDQSWLEAGEYVVVASTYMPGSEASFVLYAYA 809
BLAST of mRNA_L-elsbetiae_contig2045.6161.1 vs. uniprot
Match: A0A7R9YFX4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFX4_9STRA) HSP 1 Score: 111 bits (278), Expect = 3.900e-22 Identity = 58/152 (38.16%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 6 YSVNVYCTDTFRLDRTPTAPEHQRTIMGAWDKSSAGGALGRPRFYTNPQFTLVLTQPKTRIHLEVRAPKDYQINATVV----------SEGGTRVDSVSSEREALTSGAYRQGFCYAE-GVLSAGTYTVIVSTYKPGQIGGFAVKLCTTSPV 428 Y++ V T F + PT P+H + I GAW +S+GG++ + TNPQ+ L + Q + +H+++ AP Y +N T+V +E G RV V+ + EA +SG+YR+GFCY E L G YT++VST++PG+ G F + + TT+P+ Sbjct: 439 YTIRVLSTTPFEMRYAPTLPQHGQRIKGAWGNASSGGSMNEQTYRTNPQYRLTVRQ-RVFLHVQLLAPVRYSVNITIVRWRTNGRGVNTETG-RVSYVTVDGEAASSGSYRRGFCYLETDRLEPGEYTLVVSTFRPGERGNFFLNVHTTTPL 588 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2045.6161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2045.6161.1 >prot_L-elsbetiae_contig2045.6161.1 ID=prot_L-elsbetiae_contig2045.6161.1|Name=mRNA_L-elsbetiae_contig2045.6161.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=305bp MGAWDKSSAGGALGRPRFYTNPQFTLVLTQPKTRIHLEVRAPKDYQINATback to top mRNA from alignment at L-elsbetiae_contig2045:13760..21563- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2045.6161.1 ID=mRNA_L-elsbetiae_contig2045.6161.1|Name=mRNA_L-elsbetiae_contig2045.6161.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7804bp|location=Sequence derived from alignment at L-elsbetiae_contig2045:13760..21563- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2045:13760..21563- >mRNA_L-elsbetiae_contig2045.6161.1 ID=mRNA_L-elsbetiae_contig2045.6161.1|Name=mRNA_L-elsbetiae_contig2045.6161.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1830bp|location=Sequence derived from alignment at L-elsbetiae_contig2045:13760..21563- (Laminarionema elsbetiae ELsaHSoW15)back to top |