prot_L-elsbetiae_contig20427.6154.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig20427.6154.1
Unique Nameprot_L-elsbetiae_contig20427.6154.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length105
Homology
BLAST of mRNA_L-elsbetiae_contig20427.6154.1 vs. uniprot
Match: UPI0005D426F9 (uncharacterized protein LOC18448660 isoform X1 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0005D426F9)

HSP 1 Score: 68.6 bits (166), Expect = 2.830e-11
Identity = 32/89 (35.96%), Postives = 54/89 (60.67%), Query Frame = 0
Query:   17 MSPADWWETYGLHLPELTKVAIRVTSKVPASAGAERNWSWYGDVTGGKHARMSTERARKQVFVRANLRLQHKDYKKPKIIAWNPDSVES 105
            ++PA WW++YG+  P L ++AIR+ S+   S+G ERNWS +  +   K  R++ ER    V+V  NLRL+ +  K  +   +NP  +++
Sbjct:  591 LTPAAWWQSYGMCCPTLQRIAIRILSQTCTSSGCERNWSSFDQIHTKKRNRLAQERLNDLVYVHYNLRLKDRQMKMGEPWTYNPIRLDN 679          
BLAST of mRNA_L-elsbetiae_contig20427.6154.1 vs. uniprot
Match: A0A8J5TF56_ZIZPA (Uncharacterized protein n=2 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5TF56_ZIZPA)

HSP 1 Score: 66.2 bits (160), Expect = 1.830e-10
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = 0
Query:   19 PADWWETYGLHLPELTKVAIRVTSKVPASAGAERNWSWYGDVTGGKHARMSTERARKQVFVRANLRLQHKDYKK 92
            PADWW TYG H+P L K+AIR+ S   +++G ERNWS +  V   K  R+   R    V+V+ N RL  K  K+
Sbjct:  595 PADWWATYGCHVPLLQKMAIRILSLTSSASGCERNWSTFDMVHTKKRNRLGVGRLNNLVYVQFNARLLKKTEKR 668          
BLAST of mRNA_L-elsbetiae_contig20427.6154.1 vs. uniprot
Match: A0A6D2HUB0_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2HUB0_9BRAS)

HSP 1 Score: 59.3 bits (142), Expect = 4.960e-8
Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0
Query:   19 PADWWETYGLHLPELTKVAIRVTSKVPASAGAERNWSWYGDVTGGKHARMSTERARKQVFVRANLRL 85
            P  WW  YG+ +P L KVA ++ S   +S+G ERNWS +  V   K  R+ T+R    V+V+ N+RL
Sbjct:  591 PVQWWNFYGVEVPNLQKVARKILSLTTSSSGCERNWSIFEGVHIKKRNRLDTKRLNDLVYVQFNMRL 657          
BLAST of mRNA_L-elsbetiae_contig20427.6154.1 vs. uniprot
Match: UPI000D1C7CE8 (uncharacterized protein LOC112341331 n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C7CE8)

HSP 1 Score: 58.9 bits (141), Expect = 6.720e-8
Identity = 24/70 (34.29%), Postives = 44/70 (62.86%), Query Frame = 0
Query:   19 PADWWETYGLHLPELTKVAIRVTSKVPASAGAERNWSWYGDVTGGKHARMSTERARKQVFVRANLRLQHK 88
            P  WW ++GL +P+L ++A+R+ S+V  ++  ERNWS +  +   + +R+  + A K V++  NLR+  K
Sbjct:  538 PVTWWSSFGLEMPDLRRMALRILSQVVCASPCERNWSSWSLIQTKRRSRLLPKNAEKLVYIHTNLRVVQK 607          
BLAST of mRNA_L-elsbetiae_contig20427.6154.1 vs. uniprot
Match: UPI000A29E15B (uncharacterized protein LOC9329838 n=1 Tax=Arabidopsis lyrata subsp. lyrata TaxID=81972 RepID=UPI000A29E15B)

HSP 1 Score: 56.2 bits (134), Expect = 5.960e-7
Identity = 23/70 (32.86%), Postives = 43/70 (61.43%), Query Frame = 0
Query:   19 PADWWETYGLHLPELTKVAIRVTSKVPASAGAERNWSWYGDVTGGKHARMSTERARKQVFVRANLRLQHK 88
            P  WW TYG+ +P L  +A+++ S   +S+G +RNWS + ++   +  R+ T++    V+V+ N +L +K
Sbjct:  572 PEHWWSTYGVSVPSLETLAMKILSLTSSSSGCQRNWSTFEEIHKSERNRLDTDQMNSVVYVQFNSKLFNK 641          
BLAST of mRNA_L-elsbetiae_contig20427.6154.1 vs. uniprot
Match: A0A834SDX6_9FABA (Zf-BED domain-containing protein/DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein n=1 Tax=Senna tora TaxID=362788 RepID=A0A834SDX6_9FABA)

HSP 1 Score: 54.7 bits (130), Expect = 1.750e-6
Identity = 28/70 (40.00%), Postives = 39/70 (55.71%), Query Frame = 0
Query:   19 PADWWETYGLHLPELTKVAIRVTSKVPASAGAERNWSWYGDVTGGKHARMSTERARKQVFVRANLRLQHK 88
            PA WW++YG H PEL K  IR  S   +S+G E NWS +  V   +  R+  ++    VFV  N +L+ K
Sbjct:  156 PAQWWDSYGDHCPELQKFTIRTLSLTCSSSGCECNWSAFEMVHTKRRNRLHQKKMNDLVFVMYNQKLKDK 225          
BLAST of mRNA_L-elsbetiae_contig20427.6154.1 vs. uniprot
Match: A0A151U7W0_CAJCA (Uncharacterized protein n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151U7W0_CAJCA)

HSP 1 Score: 54.3 bits (129), Expect = 2.750e-6
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 0
Query:   17 MSPADWWETYGLHLPELTKVAIRVTSKVPASAGAERNWS 55
            M PA+WWE +G H PEL + AIRV S   +S+G ERNWS
Sbjct:  435 MLPAEWWEMFGDHCPELKRFAIRVLSLTCSSSGCERNWS 473          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20427.6154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
UPI0005D426F92.830e-1135.96uncharacterized protein LOC18448660 isoform X1 n=1... [more]
A0A8J5TF56_ZIZPA1.830e-1044.59Uncharacterized protein n=2 Tax=Zizania palustris ... [more]
A0A6D2HUB0_9BRAS4.960e-841.79Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
UPI000D1C7CE86.720e-834.29uncharacterized protein LOC112341331 n=3 Tax=Selag... [more]
UPI000A29E15B5.960e-732.86uncharacterized protein LOC9329838 n=1 Tax=Arabido... [more]
A0A834SDX6_9FABA1.750e-640.00Zf-BED domain-containing protein/DUF659 domain-con... [more]
A0A151U7W0_CAJCA2.750e-658.97Uncharacterized protein n=1 Tax=Cajanus cajan TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 14..82
e-value: 3.9E-5
score: 23.4
NoneNo IPR availablePANTHERPTHR32166:SF60coord: 9..88
NoneNo IPR availablePANTHERPTHR32166FAMILY NOT NAMEDcoord: 9..88
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 15..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20427contigL-elsbetiae_contig20427:1862..2393 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20427.6154.1mRNA_L-elsbetiae_contig20427.6154.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig20427 1862..2393 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig20427.6154.1 ID=prot_L-elsbetiae_contig20427.6154.1|Name=mRNA_L-elsbetiae_contig20427.6154.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=105bp
RTGKWEGAELLSFAQAMSPADWWETYGLHLPELTKVAIRVTSKVPASAGA
ERNWSWYGDVTGGKHARMSTERARKQVFVRANLRLQHKDYKKPKIIAWNP
DSVES
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf