mRNA_L-elsbetiae_contig20410.6149.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig20410.6149.1 vs. uniprot
Match: A0A6H5KMV8_9PHAE (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMV8_9PHAE) HSP 1 Score: 196 bits (499), Expect = 5.750e-58 Identity = 90/107 (84.11%), Postives = 100/107 (93.46%), Query Frame = 2 Query: 2 SDGSNVIVTCHLGLDIPGDEDCLMWVGVDMERRAWRNNKLLCMDTSYLHWTRNNTDKERIILLVMVWHPDLTPKEKRVLEYLDCLIRSAASGEPLPALPPAVPVEGG 322 SDGSNVI+TCHLGLD+PGDE+CLMWVGV+ME RAWRNNKLLC DTSYLHWTRNNT+KERIILLVMVWHPD+TPKE+RVLEYLD LIRSAA+G+PLP PP + VEGG Sbjct: 263 SDGSNVIITCHLGLDVPGDEECLMWVGVNMESRAWRNNKLLCTDTSYLHWTRNNTEKERIILLVMVWHPDITPKEQRVLEYLDSLIRSAAAGKPLPLQPPNL-VEGG 368
BLAST of mRNA_L-elsbetiae_contig20410.6149.1 vs. uniprot
Match: D7FV35_ECTSI (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV35_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 7.250e-18 Identity = 47/107 (43.93%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 2 SDGSNVIVTCHLGLDIPGDEDCLMWVGVDMERRAWRNNKLLCMDTSYLHWTRNNTDKERIILLVMVWHPDLTPKEKRVLEYLDCLIRSAASGEPLPALPPAVPVEGG 322 +DG N I+T HLG+D+P EDC W+ V E+R+W N K L +DTS+ H TRN++ ++RI+L++ WHPDLT E+ L ++ L SGE +P P E G Sbjct: 241 TDGRNFILTTHLGVDVP--EDC--WMRVGEEKRSWENGKALILDTSFEHETRNDSRRDRIVLIIDYWHPDLTKAEQEALAFVYDLRNKFESGE----IPLEEPEEKG 339
BLAST of mRNA_L-elsbetiae_contig20410.6149.1 vs. uniprot
Match: A0A7S2DSZ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DSZ2_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 3.810e-16 Identity = 37/86 (43.02%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 2 SDGSNVIVTCHLGLDIPGDEDCLMWVGVDMERRAWRNNKLLCMDTSYLHWTRNNTDKERIILLVMVWHPDLTPKEKRVLEYL-DCL 256 SD SN ++T HLG+D+P E W+ V ERR W+N K+L DTS LH N + ++R +L++ +WHPD+T E++ L+++ DC+ Sbjct: 214 SDMSNFVLTAHLGIDVPEGE---CWIQVGNERREWKNGKMLVFDTSVLHEAANESPRDRYVLMLRLWHPDVTQAERKALQFIFDCV 296
BLAST of mRNA_L-elsbetiae_contig20410.6149.1 vs. uniprot
Match: A0A7S1XP57_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XP57_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 5.590e-16 Identity = 38/82 (46.34%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 2 SDGSNVIVTCHLGLDIPGDEDCLMWVGVDMERRAWRNNKLLCMDTSYLHWTRNNTDKERIILLVMVWHPDLTPKEKRVLEYL 247 +D +N I+T HLGLD P DC W+ V E++ W N K + MDTS++H T NNTD++R +LL+ VWHP++T E+ L ++ Sbjct: 211 TDFTNFILTAHLGLDTPTG-DC--WIKVGEEKKNWENGKTILMDTSFIHSTENNTDQDRFVLLLRVWHPEVTKIEREALSFV 289
BLAST of mRNA_L-elsbetiae_contig20410.6149.1 vs. uniprot
Match: A0A7S0U098_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U098_HEMAN) HSP 1 Score: 85.5 bits (210), Expect = 1.140e-15 Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 2 Query: 2 SDGSNVIVTCHLGLDIPGDEDCLMWVGVDMERRAWRNNKLLCMDTSYLHWTRNNTDKERIILLVMVWHPDLTPKEKRVLEYL-DCL 256 SD N +T HLGLD+P + C W+ V ERR WRN ++L DTS +H N D++R IL++ VWHPDL+P E ++Y+ DCL Sbjct: 311 SDYCNFALTSHLGLDVP-EGQC--WIEVGNERREWRNGEMLLFDTSLMHKAANEADQKRFILMLRVWHPDLSPSEVDAIKYIFDCL 393
BLAST of mRNA_L-elsbetiae_contig20410.6149.1 vs. uniprot
Match: A0A7S3FG01_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FG01_9VIRI) HSP 1 Score: 79.0 bits (193), Expect = 7.870e-14 Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 2 Query: 2 SDGSNVIVTCHLGLDIPG-DEDCLMWVGVDMERRAWRNNKLLCMDTSYLHWTRNNTDKERIILLVMVWHPDLTPKEKRVLEYL 247 +DG N ++T HLGLD+P DE C M VG D +R W N +L DTS+ H T N+ D +R +LL+ WH DLT E++ L+++ Sbjct: 171 TDGCNFVMTSHLGLDVPHEDERCWMRVGKD--KRPWANGGILMCDTSFEHETYNDADTDRYVLLIRHWHHDLTKTERKALQWI 251
BLAST of mRNA_L-elsbetiae_contig20410.6149.1 vs. uniprot
Match: A0A7S1U6E0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6E0_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.240e-13 Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 2 Query: 2 SDGSNVIVTCHLGLDIPGDEDCLMWVGVDMERRAWRNNKLLCMDTSYLHWTRNNTDKERIILLVMVWHPDLTPKEKRVLE 241 SD N I+T HLGL +P D W+ V ERR W NK + DTS+ H T N +D+ER++L++ WHPDL+ E+ L+ Sbjct: 209 SDARNFILTAHLGLKVPEDPT-KAWMQVGAERRNWEENKAVIFDTSFEHSTGNESDEERVVLIIDFWHPDLSLPEREALQ 287
BLAST of mRNA_L-elsbetiae_contig20410.6149.1 vs. uniprot
Match: A0A1E7EX96_9STRA (Asp_Arg_Hydrox-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EX96_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.400e-13 Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 2 SDGSNVIVTCHLGLDIPGDEDCLMWVGVDMERRAWRNNKLLCMDTSYLHWTRNNTDKERIILLVMVWHPDLTPKEKRVLEYLDCLIRSAASG 277 SDG N I+T HLGL +P + C W+ V ER++W KLL +DTS++H T N T +R +L++ WH +LT E+ LE++ L SG Sbjct: 226 SDGRNFILTSHLGLQVP--DGC--WIQVGNERKSWEKQKLLTLDTSFVHSTGNPTSDDRYVLIIDCWHSELTEPEQAALEFVYDLRNKFESG 313
BLAST of mRNA_L-elsbetiae_contig20410.6149.1 vs. uniprot
Match: A0A448ZNB0_9STRA (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNB0_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 3.370e-13 Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 2 SDGSNVIVTCHLGLDIP--GDEDCLMWVGVDMERRAWRNNKLLCMDTSYLHWTRNNTDKERIILLVMVWHPDLTPKEKRVLEY-LDCL 256 SD +N ++T HL LDIP G+ C + VG E R W N K DTS LH N +DK R IL++ VWHPDLT EK L++ DCL Sbjct: 234 SDFTNFVLTSHLALDIPYSGENRCRLTVGD--ETREWINGKSYVFDTSLLHDAENESDKMRYILMMRVWHPDLTAIEKEALQFTFDCL 319
BLAST of mRNA_L-elsbetiae_contig20410.6149.1 vs. uniprot
Match: A0A7S2MQZ1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MQZ1_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 9.780e-13 Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 2 Query: 2 SDGSNVIVTCHLGLDIP--GDEDCLMWVGVDMERRAWRNNKLLCMDTSYLHWTRNNTDKERIILLVMVWHPDLTPKEKRVLEYL 247 SD +N ++T HL LDIP G+ C + +G E R W N +++ DTS +H N +D+ R IL++ +WHPDLT EK L++L Sbjct: 49 SDFTNFVLTSHLALDIPCSGENKCRLSIGD--ETRQWINGEVMLFDTSIMHDAINESDEMRYILMLRLWHPDLTEVEKEALQFL 130 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20410.6149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig20410.6149.1 >prot_L-elsbetiae_contig20410.6149.1 ID=prot_L-elsbetiae_contig20410.6149.1|Name=mRNA_L-elsbetiae_contig20410.6149.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=123bp MTPQYIVASRYISTEKYTCVVQLVLGPSESFGRTFLAVQHGLVLPLPIEAback to top mRNA from alignment at L-elsbetiae_contig20410:744..1702- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig20410.6149.1 ID=mRNA_L-elsbetiae_contig20410.6149.1|Name=mRNA_L-elsbetiae_contig20410.6149.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=959bp|location=Sequence derived from alignment at L-elsbetiae_contig20410:744..1702- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig20410:744..1702- >mRNA_L-elsbetiae_contig20410.6149.1 ID=mRNA_L-elsbetiae_contig20410.6149.1|Name=mRNA_L-elsbetiae_contig20410.6149.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=738bp|location=Sequence derived from alignment at L-elsbetiae_contig20410:744..1702- (Laminarionema elsbetiae ELsaHSoW15)back to top |