mRNA_L-elsbetiae_contig2039.6133.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2039.6133.1
Unique NamemRNA_L-elsbetiae_contig2039.6133.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig2039.6133.1 vs. uniprot
Match: D7FTJ0_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ0_ECTSI)

HSP 1 Score: 501 bits (1290), Expect = 5.560e-175
Identity = 225/293 (76.79%), Postives = 250/293 (85.32%), Query Frame = 1
Query:   13 WCINATAIYSLLLLALAQEYDEPYTNADEDRLKTFWDTRLEVDPCCEVTMGEPLEVTLWFRTDGDFADSITLYVDLPRLTTGTIENMFNDGADINLGDLEVSPSTLWMGAWEQGAFDEASPYETSRLKMVLKPGRTLDPEPDEDMFVRISKRNRISAFCGWAEDSVDFRIYTDSPIFNNLAVETSPRVGSGCRSDCYDRGVCDYCHEVCLCHEGQGDKTVDIVDSGGWPRIDCADYVCPSGKSWAARPENFEGGGRGSLESHALAECSGNGRCDRRDASCTCADGFEGDACQR 891
            W + A   Y +LLLAL QE DEPYT+ADEDRLK+FWDTR+EVDPCC+V +GEPLE+T+WFRTDG+F +S  LYVDLPRLTTGT+EN+FND  DI LG+L+VSPSTLW GAWEQG +DE SPYE SRL MVLKPGRTLDP+ DEDMFVRISKRNRISAFCGWAEDSVDFR+YT+S  F    +ETSPR+G GCR+DC++RGVCDYCHE C CHEGQGDKT DIVDSGGW RIDCADYVCPSGKSWAARP   EG GR SLE+H L ECSGNG CDR DASC CA GFEGDACQR
Sbjct:   10 WYVTAATAYCILLLALGQELDEPYTDADEDRLKSFWDTRVEVDPCCDVILGEPLEITVWFRTDGNFTESAALYVDLPRLTTGTLENLFNDSTDIGLGELDVSPSTLWRGAWEQGVYDEDSPYEGSRLLMVLKPGRTLDPDSDEDMFVRISKRNRISAFCGWAEDSVDFRLYTNSSDFGEAIIETSPRLGDGCRADCFERGVCDYCHEACHCHEGQGDKTFDIVDSGGWTRIDCADYVCPSGKSWAARPTTLEGRGRASLENHGLEECSGNGSCDRTDASCVCAPGFEGDACQR 302          
BLAST of mRNA_L-elsbetiae_contig2039.6133.1 vs. uniprot
Match: A0A7S2AMA5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMA5_9STRA)

HSP 1 Score: 296 bits (758), Expect = 2.890e-94
Identity = 146/305 (47.87%), Postives = 190/305 (62.30%), Query Frame = 1
Query:  457 ISKRNRISAFCGWAEDSVDFRI-YTDSPIFNN-----LAVETSPRVGSGCR--SDCYDRGVCDYCHEVCLCHEGQGDKTVDIVDSGGWPRIDCADYVCPSGKSWAARPENFEGGGRGSLESHALAECSGNGRCDRRDASCTCADGFEGDACQRNSCPSDCSGHGVCLSMYELGQKDEALPLMSDSNIYGGVGSDEMVAWDSESMFGCLCDSGWEVGLGAGQRQQSEFFGPDCSQRRCPSGDDPSTSADDTNCEGVTAEGGFGVGQAGNLCHVDCSGRGTCDYNTGHCSCYDGFYSENCGKTTAMA 1347
            I ++N I  +CG  E+  D +I + +S +        +++++S R GSGC   SDC+ RGVCD+C + C+C+EG G K  D + +GG   +DC++ VCP  K++   P + +        +H LAECS NG C+R   SC C  GFEGDACQR SCP+DCSGHG CLSM EL     A PL +    YG        +WD+ES+  C+CDS W VGLG GQ Q  E+FGPDCS + C SGDDP T  D+T C   TA GG GVG+AGN CHVDCS RG CDY+TG C+C+ G+Y  NCG   A +
Sbjct:   17 IYRQNGIKLYCGIGENDPDLKIRWGNSSLATGWFGEWMSIQSSTRAGSGCTALSDCHGRGVCDFCKQTCVCYEGYG-KDTDTITAGGTISVDCSERVCPYAKAFGDVPYSTD-------SAHQLAECSNNGICERTSGSCQCFPGFEGDACQRRSCPNDCSGHGQCLSMAELVNAAAAHPLTAADTTYGFSAPVSAQSWDAESLQACVCDSRWTVGLGPGQTQTGEWFGPDCSLQHCSSGDDPETKVDETACFNKTAPGGRGVGEAGNRCHVDCSNRGICDYSTGECACFQGWYGSNCGAKVAFS 313          
BLAST of mRNA_L-elsbetiae_contig2039.6133.1 vs. uniprot
Match: A0A7S2WUH0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUH0_9STRA)

HSP 1 Score: 292 bits (748), Expect = 6.090e-91
Identity = 173/452 (38.27%), Postives = 239/452 (52.88%), Query Frame = 1
Query:   40 SLLLLALAQEYDEPYTNADEDRLKTFWDTRLEVDPCCEVTMGEPLEVTLWFRTDGDFADSITLYVDLPRLTTGTIENMFNDGADINLGDLEVSPSTLWMGAWEQGAFDE-ASPYETSRLKMVLKPGRTLDPEPDEDMFVRISKRNRISAFCGWAEDSVDFRIYTDSP--IFNNLAV-----ETSPRVGSGCR--SDCYDRGVCDYCHEVCLCHEGQGDKTVDIVDSGGWPRID----CADYVCPSGKSWAARPENFEGGGRGSLESHALAECSGNGRCDRRDASCTCADGFEGDACQRNSCPSDCSGHGVCLSMYELGQKDEALPLM-SDSNIYGGVGSDEMVAWDSESMFGCLCDSGWEVGLGAGQRQQSEFFGPDCSQRRCPSGDDPST-SADDTNCEGVTAEGGFGVGQAGNLCHVDCSGRGTCDYNTGHCSCYDGFYSENCGKTTAMA 1347
            SL L  + ++Y +P+   DE  ++                +G  L + L F        +  +YV LPR T G           +    L+ S +T ++  W +G+FD  A P+  + L + ++PG ++ P  D  + V I +   I A CG+  D  + RI T++   + +N  V     E +  VGSGC    DC   GVCD+C + C C EG G     +      P +D    C    CP   +  + P         S+    L EC GNG+CDR    C CA G++G+ACQR  CP+DCSGHG CL+M EL    EALPL  S+ ++YG +      AWD +  F C+CDS WEVGLG+GQ Q  E+FGPDCS RRCP GDDP T   D+T+C   +A+G  G GQ GNLCHVDCS RG C++ TG C+C++G+Y  NCG  +AMA
Sbjct:    8 SLFLQTMPEDYVQPHPYLDETSIRLS-----------NSLVGAVLSLKLRFIPKITLNGTDEIYVSLPRFTRGNARGQPGPSGAL----LQFSRTTRFLATWNEGSFDHSAMPFAQTNLTLQVRPGESM-PAGDP-VEVEIYEEEGIRAHCGFPADWEEIRIGTNASGTLGDNGQVMLGRVEQTGFVGSGCSWLLDCSGHGVCDHCKQRCECFEGYGGS---LAGGAAPPPMDAAPDCTSRTCPVAPAVRSMPSTA------SIAHAQLLECGGNGKCDRASGECVCALGWQGEACQRRRCPNDCSGHGRCLAMEELAATPEALPLSGSNGSMYGSLDRRATKAWDFDKAFACVCDSSWEVGLGSGQVQGPEYFGPDCSLRRCPGGDDPRTPGVDETDCSNKSADGFRGRGQPGNLCHVDCSQRGICNHGTGTCACFEGYYGHNCGLVSAMA 433          
BLAST of mRNA_L-elsbetiae_contig2039.6133.1 vs. uniprot
Match: A0A7S4T8L0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T8L0_9STRA)

HSP 1 Score: 277 bits (709), Expect = 3.230e-86
Identity = 156/363 (42.98%), Postives = 212/363 (58.40%), Query Frame = 1
Query:  298 LGDLEVSPSTLWMGAWEQGAFDEASP--YETSRLKMVLKPGRTLDPEPDEDMF-VRISKRNRISAFCGWAEDSVDFRIYTD-SPIFNNLAVETSPRVGSGCR--SDCYDRGVCDYCHEVCLCHEGQGDKTVDIVDSGGWPRI-----DCADYVCPSGKSWAARPENFEGGGRGSLESHALAECSGNGRCDRRDASCTCADGFEGDACQRNSCPSDCSGHGVCLSMYELGQKDEALPLMS--DSNIYGGVGSDEM---VAWDSESMFGCLCDSGWEVGLGAGQRQQSEFFGPDCSQRRCPSGDDPSTSADDTNCEGVTAEGGFGVGQAGNLCHVDCSGRGTCDYNT----GHCSCYDGFYSENC 1326
            +GDL V PS  W G W +G +  + P  +  S L + L    +L+P    ++  V + + N I AFCG   D   F I TD S +     +E S R+G GC   S C   G CD+C+ +C C+EG G  +VD+  SG   +I     DC++  CP G S A  P +         ++H  +ECS NG C+R    C C + +EG ACQR  CP+ CSGHG+C SM E      A+PL S  DS  YG    DEM   +AWD ++M  C+CDS WEVGLG+G+ Q SE+F PDCS+RRCPSGD+P T+A++ +C GVTA GG GVG+ GNLC+V+CS +G C+Y+     G C C+ G+  +NC
Sbjct:    1 MGDLVVYPSIYWQGQWAEGTYCGSCPIPFHDSLLTLQLL---SLEPIAASELHNVVVGQSNSIQAFCGNGLDDTSFMIGTDASGLIETQTIEQSGRIGVGCDDLSKCSGHGSCDHCYNICNCYEGYG-HSVDV--SGTVVKIIDIQPDCSNKTCPLGHSAAVIPTSTN-------DAHGASECSNNGLCNRLSGECVCFELWEGSACQRRKCPNFCSGHGICASMMEQSFLSNAIPLSSSPDSLEYGST--DEMRDTIAWDHDTMQSCVCDSSWEVGLGSGEVQVSEWFLPDCSRRRCPSGDNPETAANELDCSGVTAPGGRGVGEEGNLCYVECSNQGICEYDETNGIGKCKCFPGYIGDNC 348          
BLAST of mRNA_L-elsbetiae_contig2039.6133.1 vs. uniprot
Match: A0A7S3NPQ7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPQ7_9STRA)

HSP 1 Score: 280 bits (715), Expect = 5.330e-86
Identity = 174/442 (39.37%), Postives = 239/442 (54.07%), Query Frame = 1
Query:   43 LLLLALAQEYDEPYTNADEDRLKTFWDTRLEVDPCCEVTMGEPLEVTLWFRTDGDFADSITLYVDLPRLTTGTIENMFNDGADINLGDLEVSPSTLWMGAWEQGAFD-EASPYETSRLKMVLKPGRTLDPEPDEDMFVRISKRNRISAFCG--WAEDSVD--FRIYTDSPIFNN--LAVETSPRVGSGCRS--DCYDRGVCDYCHEVCLCHEGQGDKTVDIVDSGGWPRIDCADYVCPSGKSWAARPENFEGGGRGSLESHALAECSGNGRCDRRDASCTCADGFEGDACQRNSCPSDCSGHGVCLSMYELGQKDEALPLMSDSNIYGGVGSD-EMVAWDSESMFGCLCDSGWEVGLGAGQRQQSEFFGPDCSQRRCPSGDDPSTSA-DDTNCEGVTAEGGFGVGQAGNLCHVDCSGRGTCDYNT---GHCSCYDGFYSENC 1326
            LLLLA               R+  F ++ + V P    T   P+++ +          +  +++ LPR T+G  +   N G++I  G L++ PS  + G W +G F+ E  PY  S LK+ +K  R ++     D++V  S  N I A+CG   A  S D  F I T++   NN  + +E S  VG+GC +  DC  RG C+YC E C C+E  GD   + +  G     DC    CP G SW+  P +       S E+   A CS  G C+ +  +C C  GF+G AC+R  C +DCSGHG CL+M EL   D ALPL + + +    GS  +  AWD++ + GCLCDS W VGL  GQRQQ EFFG DCS RRCPS DDP+T   D+T+C  VTA GG GVG++GN+CHVDC+ RG CD      G C+C+ G+    C
Sbjct:   12 LLLLAPLIRSXXXXXXXSSSRIWDFTESFMTVTPAQTQT---PVQIHIKMIPRMTLNATDLVWIQLPRFTSG--DGSKNPGSNIEKGQLKIGPSVYFEGEWIEGDFNSETRPYYNSSLKLYVKGSRWIESGVQIDVYVYAS--NGIKAYCGLDMASRSPDQGFIIRTNATGGNNNPVPLEDSDIVGNGCAAQLDCLSRGSCNYCTERCECYENLGDG--NPLHRGAVVSTDCTLTNCPVGLSWSGLPWS-------STEARVEATCSDAGLCEEQTGTCQCFSGFDGIACERMDCFNDCSGHGQCLTMAELAFMDSALPLSAITTLEARYGSHGKASAWDADIVRGCLCDSSWSVGLSLGQRQQPEFFGADCSLRRCPSADDPTTVVTDETDCSNVTAPGGRGVGKSGNICHVDCANRGLCDTGNNDLGRCTCFSGYSGAAC 437          
BLAST of mRNA_L-elsbetiae_contig2039.6133.1 vs. uniprot
Match: D8LCI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI8_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 7.440e-86
Identity = 172/426 (40.38%), Postives = 230/426 (53.99%), Query Frame = 1
Query:  130 LEVDPCCEVTMGEPLEVTLWFRTDGDFADSITLYVDLPRLTTGTIENMFNDGADINLGDL----EVSPSTLWMGAWEQGAFDEASP-YETSRLKMVLKPGRTLDPEPDEDMF-VRISKRNRISAFCGWAEDSVDFRIYTDS---PIFNNLAVET-SPRVGSGCR--SDCYDRGVCDYCHEVCLCHEGQGDKTVDIVDSGGWPRIDCADYVCPSGKSWAARPENFEGGGRGSLE-SHALAECSGNGRCDRRDASCTCADGFEGDACQRNSCPSDCSGHGVCLSMYELGQKDEALPLMSDSN----------------IYGGVGSDEMVAWDSESMFGCLCDSGWEVGLGAGQRQQSEFFGPDCSQRRCPSGDDPSTSADDTNCEGVTAEGGFGVGQAGNLCHVDCSGRGTCDYNTGHCSCYDGFYSE 1320
            L  DP    TM     +T+ F+   D  +   + V+L   T+G  E    +G D   GDL    E S  + W+ +WE+G + E    YE S L++     + L P P  ++  V + + N I A CG  E+     I   S   P +N+    T S  VG GCR  + C  +G CDYC + C C EG G  + +++ +    R DC++  CPSG SW        G  R   E SHA+AECS  G C R    C C  G+ G AC+R +CP DCSG+G C +M E+G    A PL++ S                 +YG    +    W+S S+FGC+CDS WEVGLG GQ QQ+++FGPDCS   CP+GDDP T  D+T+CE  TA+GG GVG AGNLCHVDCS RG CDY TG CSC+DG++ +
Sbjct:  175 LTFDPPLPQTMTH---ITVGFQPARDLVEGDNVTVNLKGFTSG--EGNGTEGRDFLHGDLLLAGESSNGSTWLASWEEGTYVEGERGYEDSMLRL-----QALAPIPAGELHEVTVYRSNGIRAQCGMGENETTSTISVVSSSDPPWNSTGEFTFSQAVGPGCRELNYCSGQGECDYCRQRCDCPEGFGSPS-ELLHAPDVAR-DCSEMTCPSGVSWGPV---LAGSPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACERYACPEDCSGNGACRNMREMGMMRTAEPLVNSSTEASSSSRGDSADGFEVVYGWDSPEGTATWESRSVFGCVCDSSWEVGLGRGQTQQAQYFGPDCSMLHCPTGDDPDTLIDETDCENKTADGGRGVGSAGNLCHVDCSNRGICDYTTGVCSCFDGYHGQ 585          
BLAST of mRNA_L-elsbetiae_contig2039.6133.1 vs. uniprot
Match: D7FTJ2_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ2_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 9.120e-85
Identity = 117/154 (75.97%), Postives = 137/154 (88.96%), Query Frame = 1
Query:  892 NSCPSDCSGHGVCLSMYELGQKDEALPLMSDSNIYGGVGSDEMVAWDSESMFGCLCDSGWEVGLGAGQRQQSEFFGPDCSQRRCPSGDDPSTSADDTNCEGVTAEGGFGVGQAGNLCHVDCSGRGTCDYNTGHCSCYDGFYSENCGKTTAMAYD 1353
            +SCPSDCSGHGVCLSM+ELGQ  EALPLM+ S+IYG VGSDE VAWD ESM+ C+CDS WEVGLG GQRQQ+E+FG DCSQRRCP+GDDP T+ DDT+CEG+TAEGGFG+GQAGN+CHVDCSGRG CD+ TG CSC+DGF+ ENCGKTT +++D
Sbjct:   32 DSCPSDCSGHGVCLSMFELGQTAEALPLMNGSHIYGDVGSDETVAWDFESMYACVCDSAWEVGLGPGQRQQAEYFGADCSQRRCPTGDDPLTAEDDTDCEGITAEGGFGLGQAGNICHVDCSGRGQCDHTTGECSCFDGFFGENCGKTTILSFD 185          
BLAST of mRNA_L-elsbetiae_contig2039.6133.1 vs. uniprot
Match: A0A7S1UJF5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJF5_9STRA)

HSP 1 Score: 276 bits (707), Expect = 1.310e-84
Identity = 145/372 (38.98%), Postives = 207/372 (55.65%), Query Frame = 1
Query:  238 LPRLTTGTIENMFNDGAD-INLGDLEVSPSTLWMGAWEQGAFDEASPYETSRLKMVLKPGRTLDPEPDEDMFVRISKRNRISAFCGWAEDSVDFRIYTDSPIFNNLAVETSPR--VGSGC--RSDCYDRGVCDYCHEVCLCHEGQGDKTVDIVDSGGWPRIDCADYVCPSGKSWAARPENFEGGGRGSLESHALAECSGNGRCDRRDASCTCADGFEGDACQRNSCPSDCSGHGVCLSMYELGQKDEALPLMSDSNIYGGVGSDEMVAWDSESMFGCLCDSGWEVGLGAGQRQQSEFFGPDCSQRRCPSGDDPSTSADDTNCEGVTAEGGF---GVGQAGNLCHVDCSGRGTCDYNTGHCSCYDGFYSENCG 1329
            LPR+T G       DG        ++++ +T +   W +G +  A PY  ++L++V+      + +    + ++I   N     CG  E+       TD  +   +  E      VG  C  +  C+  G CD C + C+C +G G  T D+ +   +P  DC++ VCP G++W   P        G+  +HA AECS  G CDR    C C  GF G+ACQ+  CP+DCSGHG+C++M+ELG    ALPL+S S +YG   ++   AWDS     C+CDS W VGL +G+ Q+ E+FG DCS +RCP+GDDP TSA +T+C GV   GG      G +GNLCHVDCS RG CD+  G C+C++GF+ ENCG
Sbjct:  105 LPRMTCGA-----GDGTPGTPPSTIQMTHTTYFTPTWTEGTYSYADPYPDTKLELVVDRAMAANTQ----LSIKIDADNGFMFHCGINENEGIKISVTDDALGALVTDELMDHTMVGPACTNKGTCFGHGTCDACRDKCVCDDGYG-STSDVYEIYVFP--DCSERVCPKGRAWGDVPT-------GATAAHADAECSNRGVCDRTTGICACVAGFGGEACQKKLCPNDCSGHGLCMNMHELGGISRALPLVSSSQVYGSSANEATTAWDSLLNMACVCDSSWSVGLASGETQEPEWFGADCSLKRCPTGDDPMTSAVETDCSGVAPVGGSTTGATGASGNLCHVDCSNRGKCDHTLGTCTCFEGFHGENCG 457          
BLAST of mRNA_L-elsbetiae_contig2039.6133.1 vs. uniprot
Match: A0A7S2G565_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G565_9STRA)

HSP 1 Score: 275 bits (704), Expect = 7.520e-84
Identity = 162/401 (40.40%), Postives = 223/401 (55.61%), Query Frame = 1
Query:  169 PLEVTLWFRTDGDFADSITLYVDLPRLTTGTIENMFNDGADINLGDLEVSPSTLWMGAWEQGAFDEAS-PYETSRLKMVLKPGRTLDPEPDEDMFVRISKRNRISAFCGWAEDSVDFRIYTDSPIFNN----LAVETSPRVGSGCRSD--CYDRGVCDYCHEVCLCHEGQGDKTVDIVDSGGWP-RIDCADYVCPSGKSWAARPENFEGGGRGSLESHALAECSGNGRCDRRDASCTCADGFEGDACQRNSCPSDCSGHGVCLSMYELGQKDEALPLM----SDSNIY--GGVGSDEMVAWDSESMFGCLCDSGWEVGLGAGQRQQSEFFGPDCSQRRCPSGDDPST-SADDTNCEGVTAEGGFGVGQAGNLCHVDCSGRGTCDYNTGHCSCYDGFYSENC 1326
            P+E+ + F      + S  + V LPR T+G  +     GA+I+ G    S +T     W++G +D +S P+  S + M +K G  L        FV I K + I  +CG  E+     ++T++    +    ++V  S ++G  C +   C + G CD+C +VC C EG G    D V  GG+P  I+CA   CP G ++A  P        G   +H   ECS NG CDR +  C C DG+EGDACQR  CP+DCSGHG CL++ EL  + EALPL     + +N+Y  G V      +WD  +   C+CDS W VGL AG++Q SE+FGPDCS R CP GDDP T + D+T+C G  A GG G G  GNLCHVDCS RG CD+ TG C+C+ G+   +C
Sbjct:   91 PVEIQIQFVPAFTVSGSDLVKVSLPRFTSGDCKQ--TKGANIDYGSFYHSLTTFVDMRWDEGDWDYSSMPFANSSITMRVKEGMQLMAGTTYT-FV-IMKASGIKIYCGLEENWEKLMLWTNASGSTSRNAPVSVAISEQIGDACENLKLCSEHGTCDHCKQVCECDEGFG-AVNDSVTKGGYPIAINCAMRTCPLGPAYADVPY-------GMYAAHQDTECSNNGLCDRAEGFCECFDGWEGDACQRRPCPNDCSGHGRCLTLEELANEKEALPLTHQDPAGANLYRYGTVSEMRNKSWDHATFSACVCDSSWGVGLDAGEKQHSEWFGPDCSLRHCPGGDDPGTETVDETDCGGKVAAGGRGTGSTGNLCHVDCSNRGKCDHMTGECTCFLGWTGSDC 479          
BLAST of mRNA_L-elsbetiae_contig2039.6133.1 vs. uniprot
Match: A0A836CLY5_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLY5_9STRA)

HSP 1 Score: 254 bits (649), Expect = 1.170e-78
Identity = 123/250 (49.20%), Postives = 155/250 (62.00%), Query Frame = 1
Query:  598 CYDRGVCDYCHEVCLCHEGQGDKTVDIVDSGGWPRIDCADYVCPSGKSWAARPENFEGGGRGSLESHALAECSGNGRCDRRDASCTCADGFEGDACQRNSCPSDCSGHGVCLSMYELGQKDEALPLMSDSNIYGGVGSDEMVAWDSESMFGCLCDSGWEVGLGAGQRQQSEFFGPDCSQRRCPSGDDPSTSADDTNCEGVTAEGGFGVGQAGNLCHVDCSGRGTCDYNTGHCSCYDGFYSENCGKTTAMA 1347
            C   G C+YC   C C+EG G+   D ++ GG    DC+   CP G+ W      F+     ++ +HA  ECSGNG CDR    C C   F GDACQR  CP+DCSGHG CLSM +L ++  A PL   +N YG    D++ AWD++  FGCLCDS W VGLG+G+ Q +E+FGP C   RCPSGDDP T+ ++ NCEG T  GG  VG AGN CHVDC+ RG CDY+ G CSC+ G+Y +NC K    A
Sbjct:    3 CSGHGTCNYCRNTCACYEGFGNLATDTLE-GGAASADCSQMTCPRGRPW------FDATLIRAV-AHADQECSGNGACDRGTGVCMCNAPFTGDACQRRRCPNDCSGHGRCLSMADLTEEGAAEPLTRAANAYG---PDDVEAWDAQLTFGCLCDSSWPVGLGSGETQVAEYFGPHCGLIRCPSGDDPETTVNEENCEGKTPPGGAEVGAAGNKCHVDCANRGVCDYSRGVCSCFTGYYGDNCAKRDVQA 241          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2039.6133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTJ0_ECTSI5.560e-17576.79EGF-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S2AMA5_9STRA2.890e-9447.87Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2WUH0_9STRA6.090e-9138.27Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4T8L0_9STRA3.230e-8642.98Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3NPQ7_9STRA5.330e-8639.37Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
D8LCI8_ECTSI7.440e-8640.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTJ2_ECTSI9.120e-8575.97EGF-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S1UJF5_9STRA1.310e-8438.98Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2G565_9STRA7.520e-8440.40Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A836CLY5_9STRA1.170e-7849.20EGF-like domain-containing protein n=1 Tax=Tribone... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2039contigL-elsbetiae_contig2039:11252..20209 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.7
Seed ortholog evalue9.4e-75
Seed eggNOG ortholog2880.D8LCI8
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.regulation of canonical Wnt signaling pathway involved in osteoblast differentiation
EggNOG OGsKOG1225@1,KOG1225@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-21_001570.1
Exons12
Model size1383
Cds size1383
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2039.6133.1prot_L-elsbetiae_contig2039.6133.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2039 11252..20209 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815841.1047626-CDS-L-elsbetiae_contig2039:11251..114071622815841.1047626-CDS-L-elsbetiae_contig2039:11251..11407Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 11252..11407 -
1691683138.764467-CDS-L-elsbetiae_contig2039:11251..114071691683138.764467-CDS-L-elsbetiae_contig2039:11251..11407Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 11252..11407 -
1622815841.1158705-CDS-L-elsbetiae_contig2039:11650..117421622815841.1158705-CDS-L-elsbetiae_contig2039:11650..11742Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 11651..11742 -
1691683138.77759-CDS-L-elsbetiae_contig2039:11650..117421691683138.77759-CDS-L-elsbetiae_contig2039:11650..11742Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 11651..11742 -
1622815841.130417-CDS-L-elsbetiae_contig2039:11993..121111622815841.130417-CDS-L-elsbetiae_contig2039:11993..12111Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 11994..12111 -
1691683138.793951-CDS-L-elsbetiae_contig2039:11993..121111691683138.793951-CDS-L-elsbetiae_contig2039:11993..12111Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 11994..12111 -
1622815841.1428235-CDS-L-elsbetiae_contig2039:12455..125801622815841.1428235-CDS-L-elsbetiae_contig2039:12455..12580Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 12456..12580 -
1691683138.8038344-CDS-L-elsbetiae_contig2039:12455..125801691683138.8038344-CDS-L-elsbetiae_contig2039:12455..12580Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 12456..12580 -
1622815841.1542463-CDS-L-elsbetiae_contig2039:15822..158871622815841.1542463-CDS-L-elsbetiae_contig2039:15822..15887Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 15823..15887 -
1691683138.8128839-CDS-L-elsbetiae_contig2039:15822..158871691683138.8128839-CDS-L-elsbetiae_contig2039:15822..15887Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 15823..15887 -
1622815841.1706748-CDS-L-elsbetiae_contig2039:16438..165471622815841.1706748-CDS-L-elsbetiae_contig2039:16438..16547Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 16439..16547 -
1691683138.8221793-CDS-L-elsbetiae_contig2039:16438..165471691683138.8221793-CDS-L-elsbetiae_contig2039:16438..16547Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 16439..16547 -
1622815841.1826108-CDS-L-elsbetiae_contig2039:16919..170471622815841.1826108-CDS-L-elsbetiae_contig2039:16919..17047Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 16920..17047 -
1691683138.8325222-CDS-L-elsbetiae_contig2039:16919..170471691683138.8325222-CDS-L-elsbetiae_contig2039:16919..17047Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 16920..17047 -
1622815841.1922097-CDS-L-elsbetiae_contig2039:17649..178041622815841.1922097-CDS-L-elsbetiae_contig2039:17649..17804Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 17650..17804 -
1691683138.8425684-CDS-L-elsbetiae_contig2039:17649..178041691683138.8425684-CDS-L-elsbetiae_contig2039:17649..17804Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 17650..17804 -
1622815841.2015738-CDS-L-elsbetiae_contig2039:18183..183121622815841.2015738-CDS-L-elsbetiae_contig2039:18183..18312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 18184..18312 -
1691683138.852832-CDS-L-elsbetiae_contig2039:18183..183121691683138.852832-CDS-L-elsbetiae_contig2039:18183..18312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 18184..18312 -
1622815841.2159934-CDS-L-elsbetiae_contig2039:18750..188121622815841.2159934-CDS-L-elsbetiae_contig2039:18750..18812Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 18751..18812 -
1691683138.8626206-CDS-L-elsbetiae_contig2039:18750..188121691683138.8626206-CDS-L-elsbetiae_contig2039:18750..18812Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 18751..18812 -
1622815841.2278738-CDS-L-elsbetiae_contig2039:19336..195131622815841.2278738-CDS-L-elsbetiae_contig2039:19336..19513Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 19337..19513 -
1691683138.8752236-CDS-L-elsbetiae_contig2039:19336..195131691683138.8752236-CDS-L-elsbetiae_contig2039:19336..19513Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 19337..19513 -
1622815841.2394445-CDS-L-elsbetiae_contig2039:20142..202091622815841.2394445-CDS-L-elsbetiae_contig2039:20142..20209Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 20143..20209 -
1691683138.8856666-CDS-L-elsbetiae_contig2039:20142..202091691683138.8856666-CDS-L-elsbetiae_contig2039:20142..20209Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2039 20143..20209 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2039.6133.1

>prot_L-elsbetiae_contig2039.6133.1 ID=prot_L-elsbetiae_contig2039.6133.1|Name=mRNA_L-elsbetiae_contig2039.6133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=461bp
MRATWCINATAIYSLLLLALAQEYDEPYTNADEDRLKTFWDTRLEVDPCC
EVTMGEPLEVTLWFRTDGDFADSITLYVDLPRLTTGTIENMFNDGADINL
GDLEVSPSTLWMGAWEQGAFDEASPYETSRLKMVLKPGRTLDPEPDEDMF
VRISKRNRISAFCGWAEDSVDFRIYTDSPIFNNLAVETSPRVGSGCRSDC
YDRGVCDYCHEVCLCHEGQGDKTVDIVDSGGWPRIDCADYVCPSGKSWAA
RPENFEGGGRGSLESHALAECSGNGRCDRRDASCTCADGFEGDACQRNSC
PSDCSGHGVCLSMYELGQKDEALPLMSDSNIYGGVGSDEMVAWDSESMFG
CLCDSGWEVGLGAGQRQQSEFFGPDCSQRRCPSGDDPSTSADDTNCEGVT
AEGGFGVGQAGNLCHVDCSGRGTCDYNTGHCSCYDGFYSENCGKTTAMAY
DSRRQSIAAL*
back to top

mRNA from alignment at L-elsbetiae_contig2039:11252..20209-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2039.6133.1 ID=mRNA_L-elsbetiae_contig2039.6133.1|Name=mRNA_L-elsbetiae_contig2039.6133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8958bp|location=Sequence derived from alignment at L-elsbetiae_contig2039:11252..20209- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGGGCTACGTGGTGCATCAACGCTACGGCTATATATTCCCTGCTGCT GTTGGCACTAGCACAAGGTGGGCCGTCTACACATATACGGGAAAAGGCTA CTTCGTGAGAAATGTAGGAGACAATCTTTGGCCTGCAAAGATCCCAACGT TGAGTTCGAGCGCTTGATGCCGTCGGGTGCGAAGTGCGAAGTCATGTCAA CCTTCCCGCAGAAATACAAACGAATCTTCGTACATACCTCATTTTTCTGT TGCCGGTCGCGCCCTTTTGTCATCAGATGGTGCTGAATTTTATTTCTCAC ATATTTATGACTAATCCGGCGTTCGCGCCAATCAGGTCTACATACATATG ATATGTAGATATGTAGATGATGTTCTACATACCTAGATCTAAGAGTCTAT CTAGATGATGTACATAAGTACCTTACGATTCACACAGAATAAAAGAATCG AAACCATGAGTACCAGTTATAGCATAACTGGGATAAGGAAGCCGCTGCTT GTTCTGCAAGAGGAGAAGGAAAACAAGAGTCAAGGGTACTCCATGCCTTT GAGTTCATGTACTGCAAGCTTAGGAAGATCAGTTGCCCTTGATACGACGT GCATACACAGTAATAGCTCTCACCGCCCCACCCCCCCACTGATTGTTTCT GCAACTGCTCCTGCTGCACCCAACGTTTAATGGACCATGAATATAGAGTA TGATGAACCTTACACCAACGCCGACGAAGACAGACTGAAGACCTTTTGGG ACACAAGGCTAGAGGTAGACCCATGCTGCGAAGTGACGATGGGGGAACCT CTGGAGGTCACCCTTTGGTTCAGAACGGATGGCGACTTCGCGGATTCGAT TACTCTTTACGTGGACCTACCCAGTGAGTTTGCTGCTTCCGCAGAGGCCA GCTCTAGCTAGTCGTTTGCTAAACCATGCGTAATAATTTGATTGGGATTT AGTTCTTCCCCTCTTGTTGCGGGCAAGAACGGAGAGGGGCGAGCCACAGA TTGTGAACGAGCTGTGTGCAAGTACCAACATTAGTGTAGAATGCATGCTG CGGCCGTACGAGCGTCTAAGAGCAAGCAATCCACCGGCATATCCGGCGGT ATTGGCGCTCGGGCATGTTCAACACTTTTCTTCGCCTGCTTGTAAGCCCC TGGGGCCCGTGCTATGTAGTGGGAACTAAGCTGTATATTTCCCCGTGCAC AGATAGAGAGTAATCAAAGCTTAGTAGGACAGCTACTCCGGCATTCCACC TCAGCTTCTTCGGTCTGAAGGGTCTAGATAAATCAATTTTCCGTTGGCAC AACCATTTTAAACATTTTAATGTTTCCGACTCTCGCTGAAGACATGCTCC TGCATCTACCCGCTCTCGGTGATCTTGACGCGGGCTGTATGGCGCAGGAC TTACGACAGGTACAATCGAAAACATGTTCAACGACGGCGCGGATATCAAT CTCGGTGACGTGAGTTGACCAAGAATATATCGCTGCAGTCAACCTTTAGA CTTAGGCCCAAGGACGGCAACATATTCAACACGCAAGTTTCTTACCCCAC CCCCAGCAATTGAAAGTCATCCAAAATATAGGCGCGAGCATACTTGGCAG GCTAGTACAGAACTCTGGCGTGTGAAAATGACCTGAAAAGCAAGTATGCA GTCTCAAACGCTTAAGATGTGTTTGCTTCTTGCAAGCGTCGAGAGCTTTG CTAAACATTTTTATGTGCTCCGGTGATGATTGTCAATCCCTGCGAATTGA GGCAAGATGTATCGTCTTCCCCAGCAACTAGTCTGGTGCAGCCTTTTCTT CCGCTGTTCAGTATTCTGTCTTTCACACGGGTCTGACCAGCACATTCTGC CCATCCCTCGAACCGACGACCGTTGTTTCCTTTGTTTCCTTTGGTAGCTG GAAGTGAGCCCCTCAACTCTTTGGATGGGCGCGTGGGAACAGGGGGCGTT CGATGAAGCGTCACCATATGAAACTTCACGTCTGAAGATGGTGTTAAAAC CTGGTCGAACACTCGATCCTGAACCGGTGAGGACAATCTATCTGCCTCTC GCGACCGTCTAATATGTAGGTGGAAATTTGTCGCCGATGAGAACGTACTA CGCGATTTTTCGCTGCTGTGCAAGTAGAGTGGGGGGGGGTCGGAAGGAGG TGCTGAAGTGATACGCTGAACAACGTGTAGTCTATCTCTGGCACGCATTT GCTATACTTCGAAGTAGACTGATGAAGACGCCGTGTGCATTATTTGCCAC GGTTTACATGGCACATGCCCCGTTCCAACCAAGAGAAATGTACCCTGCGG AGTTATAGCCCGCACGACCTGGGGAAAGGCCGACTTCTGCTATCCTTCTC GTAGCATGCTCTGCTAAAGTACCGCAATTCCTTTGGCGCGTGCTGCATGT AAAAGGATGAAGATATGTTCGTGAGAATATCCAAACGCAATCGTATCTCA GCGTTCTGCGGGTGGGCGGAAGACTCGGTGGACTTTCGCATCTACACTGA TTCTCCTATCTTCAACAACTTGGCCGTCGAGACATCACCCCGCGTAGGCA GCGGATGCCGGTAGGAGACATTACTTTCGGCAGTTTCTTCTTGAATCAGA AGGACGATAAGCGGCAGATATTTTAGTCTCGATGCGGTAGGAACCATTTC TCCGGATCCACGCTTGCTGAACCGACTTGAGTGTATATATGTATCTGGCG TAACCGATGGAATGTTTTTGAAGTGCCGTTTCTGTTTGTCTTCCCTAGAA GAGGGGGCGAGGGTCAGGAGGAAATTCAATGACAAAGGATTTAGGTAACA AGCCGAGTTCTTACAGTGCAGGACATGCTTGAACTGGATATCCTAGCGTA CAACATGCTTGAACGAAAAGAAAAGTTACCTCTTTTTTTTAGAACAACCA CCAACCCATCCCAATTGAAGGGCTTTTATTTCGGCGGGCGGGCAGACTTT ATCTGGTGCCTTGGACAGAAACACCGTAGTAGCTTCGTATCGTACAACCC GGCACCTTCGCAAGAACACACGGCGACTGCTGCATTTCTACCCGGCAACG ATGGCGTAAGTGCTCTCCACCACTAGATGAAACCAAACAACGTGGGACGC TTTCTGAAAAAGTTGCGTTTTCTTGATGAACACACGTTGGCACTGATATG ATGTTGACGCAGATCGGACTGCTACGACCGGGGAGTTTGCGATTACTGCC ACGAGGTCTGCCTTTGTCATGAAGGGCAGGGCGATAAAACTGTCGACATT GTGGACAGCGGGGGGTGGCCGCGCATCGATTGCGCCGATTGTGAGAGCAA GAAGAGTAGCTCGCCGTGTGCCCTAGAGCTCACGAGGGAGAGGGAGAGGG GGGTTATGCCATTCTTGTGGTAGAAAGTTGTTCGAATTAGGGGTTTGACC GCAGAAGGAACAGCACGATCTGCTATTTTTATCTCCGTTTGAAACTACCA CGTCATCCAGTAGGCACGCCTTCGTAGCGGGCTAATGATCGAGTTGTACT CAACACCCATCAGCTGTCTACGAGTAGGTGAAGCTCGTGGGGCTTGAGGC CACTGATCGTTTACTTTTGTTTTTGTGACCACCCCGGCTCAACCAGCGAT GTTGGTGTTATTCTTAATATGTTGCATATTGCCCATGTTAATATTCTCGG GCGCCGAAACAGACGTATGCCCTTCGGGAAAATCTTGGGCGGCAAGGCCG GAGAATTTCGAGGGGGGTGGGCGGGGGTCGTTGGAGAGCCATGCACTGGC GGAATGCTCGGGAAATGGCCGGTAAGGCATGATGAATAGCTTTTCTGCTT TGTGGTATGAGATTGAGTGTATCTTTGCAATGCTGATAAAAGCGCATCGG AAAATCCACCTTCTCTATTACTTCTACATATTTTCCCCGCACTAGGAAAT CCTAAACTCCGACCGTTCGATTCCGCTCGTCATCCATACAAACTGTGTGT TGGTGAGGTACCATTCGCAGGGTATCAACGGCTGTTTGGGAAACTGCTTT AGACCACCGTCAACGGGGCAAGACGTCAATAGTTTGTACTGGATGGAAAT TGACCTCGTTTTCAATCCAATGATGTGTTTGCACTTCACCACTTTATTGC CAATGTGGTGATCGCATCATGGCCGCGAGCGCATCATGCACCCGCGCTTT TTACGTACACCTCCCGTCTTTCGCCCGCCGAAACAATTATGGCAGATCGT AATAGGCGTTATGTTGTGTGTACCGCCCCGCGAACAACTTCCAATATGCC TCACGTCCCACCGGTTTCATTCGTTTGGTTGGACGATCGCCACACGGGTT TTCGCCCTTTTTTTCTCCTCAGGTGCGACCGGAGAGACGCATCGTGCACC TGCGCCGACGGTTTCGAAGGCGACGCCTGCCAGCGAAGTGAGCATTTTTT TGCGGTCTCATCAATAGTCTAACTAGTTTCCATCCATTGTGCTTTTTACA CGTACTCTCTCTCTCTGTCAATGGTCCCTTAATTTCAGAGCGAAACCCCC CTGCCTTTGTTGTCCGCACTTGATGTACTACTTCTACGTGGTATCACGTA TGCGTCAGATCGAATACATGCCGAGATAGCAAGACTTCAGACATGTTCAC GCAGATTGAGACATGCAGCATCATATCACCCTACTTGCTGTTGTCAAGAT AACCAAACACGCTCCAGTCAAACGTTGGCCCGCACATACTGCGCAACGTC ACGCTGGAAATAACACACGATTTCTCAAAGTCTTTCCACAAGAATATGCC AAAGAACGAAGCACACGGGCGAGCTATATCCGAGTTCCAACCAATCGGAG AGATACTCTGGGCTCTTGCTGCCGCTCTCCGTCTTATACAAGCTATATCG ACAAATGAACATACACCACTATGCGACAGCACAGACTTCTCTCTGGCCGC ATGTAACGGTCAACATACGGCCTCAAGCACCACTGCCTCCATCGTCCGCA ACACCGACCCCGCCAGTGTCTGATAGCCCAGTCTGCCCTTGCACCAACAG AAGCGCCTCATTCCATCTACCCTCGAGCGCCAGGACCTCTACCCTCCCCG AAACACTCTCTTCTTCCTCGCTATCAGCGGCTCCCCCCAATGCTGCGTCC CGAACCAAAGATAGTGCTCGCTCCCACTGTCCGCCGGCCGCACAAGCGTC GAGCGCCGCCCGGCACGTTGCCGGGGACGGATCGTCTTCCCCTCTTGCCC ACATCGTCTCAATCGTGGCCAAAGCGGTATCTGCCGCCCTTGCCGCTGAT TGCATCGCCGAAATAGCATCAGCAGCAGAGGCAGCGGGATATTCTTGTCC ATGAGGGCCTGGTACTGTTGCTGTTGAATCTGATGATGATGATGACGATG AGCGTTTTGACGTGCTGCCGGCGCTCGGCGGTGTTTCGGGGAGCTTTCCG AACAGTGGTGGCACTTGCGACGGAGGCAGCGAGCCATCCGTCGCTCCTGA GATTCCTACGCTTGAAATGAGTGCGCGAAAGAGGTTGGCGTCGGTTGAGA ACGGATGTTCAGCATTTTTATGAAAGTATTCGTTCGAGAGGGAGAACGGA GCGAGAGAGGAGTAGAGACCTGGGGACATGTACACGAAGGAGGATAATTC CAGCTAAAAATTGTTGAAGCGCTTGTTCGGTACGCCTTGCAAATAGATAT TGGTCGCTTAGCTTCGTAGGCGGGATAAACCTGACGACGGCACACCAGTA TTTCACCATGCTCTGAGAGTGTTTGGTTGGGGGTACGGTGACATCCACAC GATCACACACAAGAGTACAACACCCACGTCCACAGCCAAGGCATCATAAC TTATCATAGACAAAGCATTGATCCTAAAAAAATATGTTTGTTGATATATT TCAGTTCTTCTCAAGGAACACACTTGCATCGAAGCATCGAACCTGGTACA ACGCTCAATCCCTCCGCTTCCATCTCCTGGAGGATGTAGTCGACATGTCT TTGCTCCCCTGCCCATCGGCATTCGGCTAGTGCAGCCGTGTAAACCACGG CGCCTGGTTGGATCATCTCGGCCTTCATCTGTCGTATGCAATAGAATAGT TCAACCGATGAACGTGCGAATCCATTCCCCTAGGAAGTACACCGTTTCCC GGCAGCGAGAGAGAGCACGCAAATGCAGCTGCGGGAACATCTCGCTGGTT CGGCCCCCGTGAAACACACACTTTTCGTGCTACACAAAACGTGTGTGTTG TGTGCCGCAGTGTTCGTATTCTTGACTTGTCGCCAAATCTATCAACCAAC TTTATCTTCACCGTACCTCCTCCACGAGAAAGAGCGCCAGCTCCCACGGG ACAACGCTTTGCCCACCGAACATGCGAGTGGGGCCAACAGCAGCACGGCA GCTTCCAGCTGGAAGGTGTCTCCATCTACCGCACGACAACGACCGCTGTT GCTCGGGCGAGGCCCTAGTCAGGCGAAGCCTCTTGCTGGGGGAAGCAACC CTGCTGCCGCTGCTGCCGCTGCTGCCGCTGCTGCCGCTGCTGCCGCTGCT GATGCTGCTACTGGCGGTATTGGAAAATGTTGAGTAAGTTGCAGTAGTTA TTAGAGCGGTGCGGTCCTGGTGCTCATGTTTGGGTCCCCTCGTTGAAGGT GATGGCGCCAGTTTCACGAAGCAAATGCGGGTGTTCGCAAGTGCTCGGAT TAAAGAATAAGGACCACCCCGGCCGGAAACTCGCTTCGCTGCATGCAACG TAGACGACATGGCTCCGCTCCCAGCTGGTGATGATTTCCCGACACACACC GGAAAATACTGGCAACCCCGTTCGGGGAGAACGCTTCTCGTTGAAAGCTG GAAACCCCGTTTGGACGGAGATTTATTTTCCTCGGCCGCTCGCCGCTCGT TCGTCAGAGGGTCTCACGGTGCCTTTTGTCCCAAAACTGACCCGCTGTTG CCTACTTCTCCCTCACCAATTGATTGCTTGACAGAGCGCGTTTAGCATAC TTCCAAGAAGGGCAGAATATAACGAATCCGACAGCCTGCTGGTAAAAAAA AAAAATCTATCCTATGGACTGGTCTACATATTGATATCTAGTCTAGATTC TATCTACTAATCTAGTAGTTTAGTCTTAGATAGATAACTATCTAAAGACT AGTAAATCTACACAGGATATCTATCTAGATATCTATCTAGAGTCTACACA TACATAGATGCTCTACGAGATCTATAGATCTACGATGTATGTATGTAGAT TAGCTTCCCGGCGGTACTTGGTGCTTTTCAATCGACTCCTCCTCTTATAG ATAACTATCTAGACTATCTAGACTATCAATATGTATCTAGACTATGTATC TAGTAGTCCCCGCCGTACAACAGTACGTAGTAGCTCCTTCTTACCTCGAT ATCTGGTATACCCGACATTGGTCGTGAGTACAGCGACAAAGGCGCCACTA TGCTATTTATTTGTAGTGTGGCGTATCCTTTTCTTGTCGGTGATGTGGCG ATCTTGAGCTGAAAATAGTACCACCGTAGACCAATCCACGGCGGACCGCG GCATGTCTGTCGGTGCGCGCCGAAAGGTTTGAAACAACCCGCAAAAAACA ATGTCATGCCGTCAAGCATGAATCCACATACCGGCGTGGTGGTTGCCAAC CAAAGACGTGTTGTATCTACTTCTCGCAGATTCCTGCCCGTCGGATTGCT CCGGCCACGGGGTATGCCTAAGCATGTACGAATTGGGCCAAAAGGACGAG GCCTTACCCCTGATGAGCGATTCCAACATCTATGGGGGTGTGGGCTCCGA CGAGGTAATCAAGACTAAGTTCTCAAGGTAGAGCGATAAGTGTTATGATT CCCCAGAGGCAGATAAATCAGGGAGGAGGAACTCCTTGCATCAAATGTCT CACTTTCAATTTTGCTATATATGACTGCTGCATTGTACAAAACGATAACC GGACATATGTTTCTTTTATGGCGCCCCCCGAATTTGTTGTCCTTGTTCAG CAAGAAAAAGTGCAACCATTGAGGAAGCTTGGTTTTGGGGAAGATATGTC GTCGAACACAAAGTGAATGGAAAATGACTGACGCGCATGCGCCCTTGGCT CGAACCCCAACCTACGAGCTGATCCTCTCTTGTTCCATTCAACACCAGAT GGTGGCCTGGGACTCCGAGTCGATGTTTGGCTGCCTTTGTGACTCAGGTT GGGAAGTCGGGTTAGGTGCTGGACAACGGCAGCAGTCTGAGTTCTTTGGG CCGGATTGTTCTCAACGTAAGCCTGCCTATCGCTCTTATGAACATAGCTA AATCTCCAACAGAGCCGTGCTGGCGGGATTGCGTAGCACAGACCGGTGAA CTGCAACTTGCAAGAAGCGCGCAAAGCAGCGGGGAACCGCCCCCCTGCAT TGTTGCGTGGCCGGTCTGGACCGGCTCAATTTTTTGTCGACTGTGCTCAG TGCCATCTTGCCAATATTGTTGCTGATCGCCACATGAACTTCCTACACGG ACCACCCCCGCTTTCAGGAAGGTGCCCTTCTGGGGACGACCCTTCGACAT CCGCTGACGATACGAACTGCGAGGGAGTCACAGCAGAAGGAGGCTTCGGG GTAGGGCAGGTGTGTATGTTATGACGCCTAGCACGACTATTCCTGCATAC GGTAATCTTTCTTTCACCGTTGGCAACAAACTTGCGGAAAGTTGGCTTGC CGTGCTCACGCGAGCAAAGCTGTATCGAGGTCCGTGCACCGGTCATGGCC ACTCACGTACGTCGGTCATATCGCCAAACGTTTTCTCAATGCCTGGGCAC GACTTGAACTCGGGCGACGCTTTCAATCGCAACTTGCCGTGCCGCCTTCC AGGCGGGAAACTTATGCCATGTGGACTGTTCGGGCAGAGGGACATGCGAC TACAACACCGGGCATTGTTCCTGCTACGACGGATTTTACAGTGAAAACTG CGGGAAAACCACCGCCATGGCGTACGACTCTCGGCGGCAGTCGATAGCAG CGCTGTAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig2039:11252..20209-

>mRNA_L-elsbetiae_contig2039.6133.1 ID=mRNA_L-elsbetiae_contig2039.6133.1|Name=mRNA_L-elsbetiae_contig2039.6133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2766bp|location=Sequence derived from alignment at L-elsbetiae_contig2039:11252..20209- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGGGCTACGTGGTGCATCAACGCTACGGCTATATATTCCCTGCTGCT
GTTGGCACTAGCACAAGATGCGGGCTACGTGGTGCATCAACGCTACGGCT
ATATATTCCCTGCTGCTGTTGGCACTAGCACAAGAGTATGATGAACCTTA
CACCAACGCCGACGAAGACAGACTGAAGACCTTTTGGGACACAAGGCTAG
AGGTAGACCCATGCTGCGAAGTGACGATGGGGGAACCTCTGGAGGTCACC
CTTTGGTTCAGAACGGATGGCGACTTCGCGGATTCGATTACTCTTTACGT
GGACCTACCCAAGTATGATGAACCTTACACCAACGCCGACGAAGACAGAC
TGAAGACCTTTTGGGACACAAGGCTAGAGGTAGACCCATGCTGCGAAGTG
ACGATGGGGGAACCTCTGGAGGTCACCCTTTGGTTCAGAACGGATGGCGA
CTTCGCGGATTCGATTACTCTTTACGTGGACCTACCCAGACTTACGACAG
GTACAATCGAAAACATGTTCAACGACGGCGCGGATATCAATCTCGGTGAC
GACTTACGACAGGTACAATCGAAAACATGTTCAACGACGGCGCGGATATC
AATCTCGGTGACCTGGAAGTGAGCCCCTCAACTCTTTGGATGGGCGCGTG
GGAACAGGGGGCGTTCGATGAAGCGTCACCATATGAAACTTCACGTCTGA
AGATGGTGTTAAAACCTGGTCGAACACTCGATCCTGAACCGCTGGAAGTG
AGCCCCTCAACTCTTTGGATGGGCGCGTGGGAACAGGGGGCGTTCGATGA
AGCGTCACCATATGAAACTTCACGTCTGAAGATGGTGTTAAAACCTGGTC
GAACACTCGATCCTGAACCGGATGAAGATATGTTCGTGAGAATATCCAAA
CGCAATCGTATCTCAGCGTTCTGCGGGTGGGCGGAAGACTCGGTGGACTT
TCGCATCTACACTGATTCTCCTATCTTCAACAACTTGGCCGTCGAGACAT
CACCCCGCGTAGGCAGCGGATGCCGGATGAAGATATGTTCGTGAGAATAT
CCAAACGCAATCGTATCTCAGCGTTCTGCGGGTGGGCGGAAGACTCGGTG
GACTTTCGCATCTACACTGATTCTCCTATCTTCAACAACTTGGCCGTCGA
GACATCACCCCGCGTAGGCAGCGGATGCCGATCGGACTGCTACGACCGGG
GAGTTTGCGATTACTGCCACGAGGTCTGCCTTTGTCATGAAGGGCAGGGC
GATAAAACTGTCGACATTGTGGACAGCGGGGGGTGGCCGCGCATCGATTG
CGCCGATTATCGGACTGCTACGACCGGGGAGTTTGCGATTACTGCCACGA
GGTCTGCCTTTGTCATGAAGGGCAGGGCGATAAAACTGTCGACATTGTGG
ACAGCGGGGGGTGGCCGCGCATCGATTGCGCCGATTACGTATGCCCTTCG
GGAAAATCTTGGGCGGCAAGGCCGGAGAATTTCGAGGGGGGTGGGCGGGG
GTCGTTGGAGAGCCATGCACTGGCGGAATGCTCGGGAAATGGCCGACGTA
TGCCCTTCGGGAAAATCTTGGGCGGCAAGGCCGGAGAATTTCGAGGGGGG
TGGGCGGGGGTCGTTGGAGAGCCATGCACTGGCGGAATGCTCGGGAAATG
GCCGGTGCGACCGGAGAGACGCATCGTGCACCTGCGCCGACGGTTTCGAA
GGCGACGCCTGCCAGCGAAGTGCGACCGGAGAGACGCATCGTGCACCTGC
GCCGACGGTTTCGAAGGCGACGCCTGCCAGCGAAATTCCTGCCCGTCGGA
TTGCTCCGGCCACGGGGTATGCCTAAGCATGTACGAATTGGGCCAAAAGG
ACGAGGCCTTACCCCTGATGAGCGATTCCAACATCTATGGGGGTGTGGGC
TCCGACGAGATTCCTGCCCGTCGGATTGCTCCGGCCACGGGGTATGCCTA
AGCATGTACGAATTGGGCCAAAAGGACGAGGCCTTACCCCTGATGAGCGA
TTCCAACATCTATGGGGGTGTGGGCTCCGACGAGATGGTGGCCTGGGACT
CCGAGTCGATGTTTGGCTGCCTTTGTGACTCAGGTTGGGAAGTCGGGTTA
GGTGCTGGACAACGGCAGCAGTCTGAGTTCTTTGGGCCGGATTGTTCTCA
ACATGGTGGCCTGGGACTCCGAGTCGATGTTTGGCTGCCTTTGTGACTCA
GGTTGGGAAGTCGGGTTAGGTGCTGGACAACGGCAGCAGTCTGAGTTCTT
TGGGCCGGATTGTTCTCAACGAAGGTGCCCTTCTGGGGACGACCCTTCGA
CATCCGCTGACGATACGAACTGCGAGGGAGTCACAGCAGAAGGAGGCTTC
GGGGTAGGGCAGGAAGGTGCCCTTCTGGGGACGACCCTTCGACATCCGCT
GACGATACGAACTGCGAGGGAGTCACAGCAGAAGGAGGCTTCGGGGTAGG
GCAGGCGGGAAACTTATGCCATGTGGACTGTTCGGGCAGAGGGACATGCG
ACTACAACACCGGGCATTGTTCCTGCTACGACGGATTTTACAGTGAAAAC
TGCGGGAAAACCACCGCCATGGCGTACGACTCTCGGCGGCAGTCGATAGC
AGCGCTGTAGGCGGGAAACTTATGCCATGTGGACTGTTCGGGCAGAGGGA
CATGCGACTACAACACCGGGCATTGTTCCTGCTACGACGGATTTTACAGT
GAAAACTGCGGGAAAACCACCGCCATGGCGTACGACTCTCGGCGGCAGTC
GATAGCAGCGCTGTAG
back to top