prot_L-elsbetiae_contig20272.6097.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig20272.6097.1
Unique Nameprot_L-elsbetiae_contig20272.6097.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length195
Homology
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A6H5KT12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT12_9PHAE)

HSP 1 Score: 318 bits (816), Expect = 1.600e-108
Identity = 167/181 (92.27%), Postives = 171/181 (94.48%), Query Frame = 0
Query:   17 MNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAASKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLEGRGEG--GGCRLRNGLASCSKD 195
            MNKTYLRYELSETFGVVASPQSN VYDSTGNLAISAALH+VAVWNLRQCSLVRLLSPE ESAAS+AQVT+LLLSPDG TVAAGYSSGLVLLFSLK+GATAVTLHGHRSAVTA RYH SGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDV FLEG G G  GGCRLRNGLASCSKD
Sbjct:    1 MNKTYLRYELSETFGVVASPQSNVVYDSTGNLAISAALHEVAVWNLRQCSLVRLLSPEGESAASRAQVTSLLLSPDGRTVAAGYSSGLVLLFSLKTGATAVTLHGHRSAVTAARYHASGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVVFLEGGGGGAPGGCRLRNGLASCSKD 181          
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: D8LS39_ECTSI (Utp12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS39_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 2.090e-97
Identity = 166/185 (89.73%), Postives = 169/185 (91.35%), Query Frame = 0
Query:   17 MNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAASKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLEGRGEG------GGCRLRNGLASCSKD 195
            MNKTYLRYELSETFGVVASPQSN VYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPE ESAAS+AQVT+LLLSPDGSTVAAGYSSGLVLLFSLK+GATAVTLHGHRSAVTA RYH SGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDV FL   G        GGCRLRNGLASCSKD
Sbjct:    1 MNKTYLRYELSETFGVVASPQSNVVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESAASRAQVTSLLLSPDGSTVAAGYSSGLVLLFSLKTGATAVTLHGHRSAVTAARYHASGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVVFLGSGGXXXXXVVPGGCRLRNGLASCSKD 185          
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A835Z9P3_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P3_9STRA)

HSP 1 Score: 203 bits (516), Expect = 3.610e-57
Identity = 107/178 (60.11%), Postives = 134/178 (75.28%), Query Frame = 0
Query:   19 KTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAA-SKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLEGRGEGGGCRLRNGLASCSKD 195
            KTYLRY L +TFGV+AS QSNAV+D TGNLAI+AAL +VAVWNLRQ +L+R+L PE + A  +K QV+ L LSP+G  VAAGY++G++ ++ + +GA AV  +GH+SAVTA R++  GALL SG ADTD+++WD VAE G  RLRGHRDGVTDVAFL   G      L  G  SCSKD
Sbjct:    2 KTYLRYVLHDTFGVIASTQSNAVFDKTGNLAITAALQEVAVWNLRQGTLLRMLKPEGDEATIAKGQVSYLALSPNGRRVAAGYTTGVIRVYDVATGAMAVAFNGHKSAVTAARFNDGGALLISGGADTDVILWDMVAERGECRLRGHRDGVTDVAFLPAGGA-----LARGAVSCSKD 174          
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A485L7V7_9STRA (Aste57867_17075 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7V7_9STRA)

HSP 1 Score: 166 bits (420), Expect = 4.280e-44
Identity = 89/156 (57.05%), Postives = 110/156 (70.51%), Query Frame = 0
Query:   19 KTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAASKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFL 174
            K+YLRY    +FGV+ SP +  VYD TG LAI  AL  V VWN+R  + VR L  E+ES  +  QVT L LSPDG  VAAGYSSG+V +F L +G   VTL GH+++V +  Y  +GALLASGS DTDI+VWD V++SGLYRLRGH+D VT + FL
Sbjct:   19 KSYLRYSAESSFGVICSPNARCVYDLTGQLAICGALKSVIVWNIRTGAQVRTLKGESESDTA-GQVTALCLSPDGLYVAAGYSSGIVRIFKLSNGNVEVTLDGHKNSVESLVYGDNGALLASGSRDTDIIVWDVVSQSGLYRLRGHKDAVTALTFL 173          
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A1V9ZWR3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWR3_9STRA)

HSP 1 Score: 164 bits (415), Expect = 2.510e-43
Identity = 87/168 (51.79%), Postives = 119/168 (70.83%), Query Frame = 0
Query:    8 RRGWRTCTEMNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAASKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLE 175
            RR +++   + K+YL+Y  S +FGVVASP +  +YD TG LAI+ AL  V VWN+R    VR+L  ++E+  +  QVT L LSPDG+ VA GYS+G+V +F L +G   V+L GH++A+    Y   GA+LASGS DTDI+VWD V++SGLYRLRGH+D VT VAF++
Sbjct:  671 RRIYQSFQFLMKSYLKYAPSASFGVVASPNAPCIYDLTGQLAIAGALKQVIVWNIRTGMQVRVLESDSENDMA-GQVTALCLSPDGAYVAVGYSAGVVRIFKLSNGNVEVSLDGHKNAIECLAYGDDGAVLASGSRDTDIIVWDVVSQSGLYRLRGHKDAVTSVAFVD 837          
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A7S1XLU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLU6_9STRA)

HSP 1 Score: 162 bits (409), Expect = 9.650e-43
Identity = 88/180 (48.89%), Postives = 123/180 (68.33%), Query Frame = 0
Query:   17 MNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAASKAQ-VTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLEGRGEGGGCRLRNGLASCSKD 195
            M +TYLRY     FGV+A+P+ N++Y     LA++ +L DV VW+L+Q SL+R L+PE+ +  ++A+ V +L L P G  VAAGY+SG++ +F  K+G   +  HGHRSAVT       GA LA+G++DTD+VVWDAVAE+G+ RLRGHR  VT VAFL+ +G GG      G+ S S+D
Sbjct:   34 MQRTYLRYVPEHAFGVIATPRGNSLYAEGDQLALTPSLRDVGVWHLKQGSLLRRLTPESTTPGTEAEEVASLTLLPGG-RVAAGYTSGVLRVFDYKTGTQELAFHGHRSAVTCADGTADGAFLATGASDTDVVVWDAVAETGVCRLRGHRGAVTAVAFLQPKGSGGNGAGFFGVVSASQD 212          
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A6U0TFN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TFN6_9STRA)

HSP 1 Score: 154 bits (388), Expect = 8.930e-40
Identity = 85/180 (47.22%), Postives = 118/180 (65.56%), Query Frame = 0
Query:   17 MNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAA-SKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLEGRGEGGGCRLRNGLASCSKD 195
            MN+TYLRY   ++FGV+ +P+ N++   + +LAI+ AL D AVWNL+Q SLV+ L PE  S    +A+  + LL      VAAGY+SGL+ +FSL  G   + LHGHR+ VTA    T  A LA+G+ DTD+VVWD ++E+G+ RL+GHR  +T V+FL+GR  G       GL S S+D
Sbjct:   24 MNRTYLRYVPQQSFGVICTPRGNSILGESEDLAITPALRDAAVWNLKQGSLVKRLRPEGGSGGVQEAEEVSQLLLLGRDRVAAGYTSGLLRVFSLSEGRQELALHGHRTEVTALSCSTDAAFLATGAKDTDVVVWDTISETGVCRLKGHRHAITAVSFLQGRDSGTSVGFF-GLVSASQD 202          
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A5D6Y6H3_9STRA (Utp12 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6H3_9STRA)

HSP 1 Score: 152 bits (384), Expect = 3.230e-39
Identity = 84/160 (52.50%), Postives = 108/160 (67.50%), Query Frame = 0
Query:   17 MNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAASKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSG--ALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFL 174
            M K+YLRYE    FGVVA+   N ++D TG LAI+ AL DV VWN+RQ S VR L  +        Q T L LSPDG+ VAAGYS+G V +F L +GA  VTL GH SAV A  +   G  A+LASG+ DTD++VWD V+++GL+RL+GH+D VT + F+
Sbjct:    1 MVKSYLRYERETAFGVVAAAAGNVIFDRTGRLAIAPALKDVVVWNVRQGSFVRALRGDG------GQATALALSPDGALVAAGYSTGAVRVFRLATGALEVTLDGHASAVEALAFGARGGAAVLASGARDTDVIVWDLVSQTGLFRLKGHKDAVTALRFV 154          
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: E1ZIF0_CHLVA (Utp12 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZIF0_CHLVA)

HSP 1 Score: 150 bits (379), Expect = 1.520e-38
Identity = 77/160 (48.12%), Postives = 107/160 (66.88%), Query Frame = 0
Query:   17 MNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPE-AESAASKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLE 175
            M K YLRYEL+ ++GV+ SP  N  YD +G   ++A+L +V+VWN++Q  + + L+P  ++S  +  +VT +  SP  + VA G++ G V L+ L SG  A T  GHR  V+A R+   GALLASGS DTD+VVWD   E+GLYRLRGHR  VTD+ F+E
Sbjct:    1 MVKAYLRYELAGSWGVINSPGCNVCYDRSGRHLLTASLENVSVWNIKQAVVAKTLTPPISQSGKAAGEVTQIAASPSANQVAVGHADGTVRLWDLDSGECAATFSGHRKEVSALRFSRGGALLASGSKDTDVVVWDVAGEAGLYRLRGHRGQVTDLVFVE 160          
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Match: A0A2G5BKB0_COERN (WD40 repeat-like protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BKB0_COERN)

HSP 1 Score: 145 bits (366), Expect = 8.460e-37
Identity = 70/159 (44.03%), Postives = 109/159 (68.55%), Query Frame = 0
Query:   17 MNKTYLRYELSETFGVVASPQSNAVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEAESAASKAQVTNLLLSPDGSTVAAGYSSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVAFLE 175
            M K+YLRYE   +FGV++SP  NAV+D +G  +I+ AL  V VW++++ + +     +   + +KA+VT +  SP+G   A GY+ G + LF L S    V L+GHR +++A  + ++G +LASG+ DTD+++WD V E+GLYRLRGH+D +TD+AF+E
Sbjct:    1 MVKSYLRYEAHSSFGVISSPSGNAVFDHSGRYSITPALEKVIVWDIKKGTKIA----QWADSDNKAEVTRIARSPNGKDYAVGYADGSIRLFDLSSNRVNVVLNGHRGSLSALVFDSTGTILASGARDTDVIIWDVVGEAGLYRLRGHKDEITDIAFVE 155          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20272.6097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT12_9PHAE1.600e-10892.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS39_ECTSI2.090e-9789.73Utp12 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835Z9P3_9STRA3.610e-5760.11WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A485L7V7_9STRA4.280e-4457.05Aste57867_17075 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9ZWR3_9STRA2.510e-4351.79Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]
A0A7S1XLU6_9STRA9.650e-4348.89Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A6U0TFN6_9STRA8.930e-4047.22Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A5D6Y6H3_9STRA3.230e-3952.50Utp12 domain-containing protein n=1 Tax=Pythium br... [more]
E1ZIF0_CHLVA1.520e-3848.13Utp12 domain-containing protein n=1 Tax=Chlorella ... [more]
A0A2G5BKB0_COERN8.460e-3744.03WD40 repeat-like protein n=1 Tax=Coemansia reversa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 70..109
e-value: 3.8
score: 13.3
coord: 112..151
e-value: 2.6E-5
score: 33.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 118..151
e-value: 2.3E-4
score: 21.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 119..151
score: 13.115
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 6..195
e-value: 3.1E-27
score: 97.6
NoneNo IPR availablePANTHERPTHR19853:SF0WD REPEAT-CONTAINING PROTEIN 3coord: 17..195
NoneNo IPR availablePANTHERPTHR19853WD REPEAT CONTAINING PROTEIN 3 WDR3coord: 17..195
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 138..152
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 77..195
score: 18.141
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 41..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20272contigL-elsbetiae_contig20272:884..2422 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20272.6097.1mRNA_L-elsbetiae_contig20272.6097.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig20272 884..2422 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig20272.6097.1 ID=prot_L-elsbetiae_contig20272.6097.1|Name=mRNA_L-elsbetiae_contig20272.6097.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=195bp
PGIGQGTRRGWRTCTEMNKTYLRYELSETFGVVASPQSNAVYDSTGNLAI
SAALHDVAVWNLRQCSLVRLLSPEAESAASKAQVTNLLLSPDGSTVAAGY
SSGLVLLFSLKSGATAVTLHGHRSAVTAGRYHTSGALLASGSADTDIVVW
DAVAESGLYRLRGHRDGVTDVAFLEGRGEGGGCRLRNGLASCSKD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf