prot_L-elsbetiae_contig2024.6089.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig2024.6089.1
Unique Name	prot_L-elsbetiae_contig2024.6089.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	224

Homology

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BLAST of mRNA_L-elsbetiae_contig2024.6089.1 vs. uniprot
Match: A0A6H5K7Z6_9PHAE (DUF4440 domain-containing protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7Z6_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 6.820e-81
Identity = 141/225 (62.67%), Postives = 163/225 (72.44%), Query Frame = 0

Query:    2 MMNAASM--GRTASRVGRVVAGKSEPSLQRGLSARAGSRNGLLSTRSALGGVSQIATRFAVTK-PLRQLPTGQIGSIACLSSGPVTADMKAVMAATEKWRDTVTLNTDDAPKKTAALYAPDALFWGTVSEQVRDTPAHVYQYFDFFARVPKLRMIQYNPGSVRVHGDIALQAGDYTFAWQGADGATVEVKARYTFGYRREKDGWIIIEHHSSAMPKAPDALKPAQ 223
            MMN   M  GRTASR+ RVV+ KSE S+Q  + A  GS N LLSTRS L  V+Q ATR    K P+RQ+ +GQ    A       T+D KAV AAT  WRDTVT NT+DAPKKTAA+YA DALFWGTVSEQVR+TP HVY YFDFFAR+PKL M+ Y+P   R+HGD A+ AG YTFAW GADGA  E +AR+TF YRRE   W+++EHHSSAMPKAP  LKPAQ
Sbjct:    1 MMNFGKMPAGRTASRLARVVS-KSESSIQSSVRA-GGSMNALLSTRSGLT-VTQAATRLTAVKLPVRQM-SGQADYAA-----NYTSDQKAVDAATRNWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEQVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMVEHHSSAMPKAPPGLKPAQ 216

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BLAST of mRNA_L-elsbetiae_contig2024.6089.1 vs. uniprot
Match: A0A6H5K6U8_9PHAE (DUF4440 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6U8_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 1.120e-69
Identity = 101/140 (72.14%), Postives = 114/140 (81.43%), Query Frame = 0

Query:   84 TADMKAVMAATEKWRDTVTLNTDDAPKKTAALYAPDALFWGTVSEQVRDTPAHVYQYFDFFARVPKLRMIQYNPGSVRVHGDIALQAGDYTFAWQGADGATVEVKARYTFGYRREKDGWIIIEHHSSAMPKAPDALKPAQ 223
            TAD KAV AAT  WRDTVT NT+DAPKKTAA+YA DALFWGTVSE+VR+TP HVY YFDFFAR+PKL M+ Y+P   R+HGD A+ AG YTFAW GADGA  E +AR+TF YRRE   W++IEHHSSAMPKAP  LKPAQ
Sbjct:   12 TADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAVHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMIEHHSSAMPKAPPGLKPAQ 151

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BLAST of mRNA_L-elsbetiae_contig2024.6089.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 1.750e-58
Identity = 93/143 (65.03%), Postives = 113/143 (79.02%), Query Frame = 0

Query:   83 VTADMKAVMAATEKWRDTVTLNTDDAPKKTAALYAPDALFWGTVSEQVRDTPAHVYQYFDFFARVPKLRMIQYNPGSVRVHGDIALQAGDYTFAWQGADGATVEVKARYTFGYRREKDG----WIIIEHHSSAMPKAPDALKP 221
            +T D KAV A T  W+DTVTL TDDAPKKTAALYAPDA+ WGTVSE+VR+TP  +Y YFDFFAR+PKLR+++Y P  VRV+G+ A++AG YTFAWQG DG TVE +AR++F +RR K G    W I+EHHSS+MP AP  LKP
Sbjct:  290 ITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTFRRGKPGSPQPWTIVEHHSSSMPIAPAELKP 432

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BLAST of mRNA_L-elsbetiae_contig2024.6089.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 9.470e-57
Identity = 92/145 (63.45%), Postives = 113/145 (77.93%), Query Frame = 0

Query:   83 VTADMKAVMAATEKWRDTVTLNTDDAPKKTAALYAPDALFWGTVSEQVRDTPAHVYQYFDFFARVPKLRMIQYNPGSVRVHGDIALQAGDYTFAWQGADGATVEVKARYTFGYRREKDG----WIIIEHHSSAMPKAPDALKPAQ 223
            +T D KAV A T  W+DTVTL TDDAPKKTAALYA DA+ WGTVSE+VR+TP  +Y YFDFFAR+PKLR+++Y P  VRV+G  A++AG YTFAWQG DG TVE +AR++F +RR+K G    W I+EHHSS+MP AP  LKP +
Sbjct:  284 ITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPVE 428

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BLAST of mRNA_L-elsbetiae_contig2024.6089.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 1.350e-55
Identity = 91/142 (64.08%), Postives = 111/142 (78.17%), Query Frame = 0

Query:   83 VTADMKAVMAATEKWRDTVTLNTDDAPKKTAALYAPDALFWGTVSEQVRDTPAHVYQYFDFFARVPKLRMIQYNPGSVRVHGDIALQAGDYTFAWQGADGATVEVKARYTFGYRREKDG----WIIIEHHSSAMPKAPDALK 220
            +T D KAV   T  W+DTVTL TDDAPKKTAALYAPDA+ WGTVSE+VR+TP  +Y YFDFFAR+PKLR+++Y P  VRV+G+ A+QAG YTFAW+G DG TVE +AR++F +RR K G    W I+EHHSS+MP AP  LK
Sbjct:  319 ITPDQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRRGKPGSPRPWTIVEHHSSSMPDAPAELK 460

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BLAST of mRNA_L-elsbetiae_contig2024.6089.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 3.730e-52
Identity = 88/142 (61.97%), Postives = 109/142 (76.76%), Query Frame = 0

Query:   83 VTADMKAVMAATEKWRDTVTLNTDDAPKKTAALYAPDALFWGTVSEQVRDTPAHVYQYFDFFARVPKLRMIQYNPGSVRVHGDIALQAGDYTFAWQGADGATVEVKARYTFGYRREKDG----WIIIEHHSSAMPKAPDALK 220
            +T DMKAV   T  W++TVTL T+DAPKKTAALYA DA+ WGTVSE+VR+TP  +Y YFDFFAR+PKLR+++Y P   RV+G  A+QAG YTFAWQG DG TVE +AR++F +RR+       W I+EHHSS+MP APD LK
Sbjct: 1414 ITPDMKAVSETTIVWKNTVTLGTEDAPKKTAALYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPARVYGQFAVQAGTYTFAWQGNDGETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPDGLK 1555

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BLAST of mRNA_L-elsbetiae_contig2024.6089.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 7.730e-52
Identity = 85/142 (59.86%), Postives = 106/142 (74.65%), Query Frame = 0

Query:   84 TADMKAVMAATEKWRDTVTLNTDDAPKKTAALYAPDALFWGTVSEQVRDTPAHVYQYFDFFARVPKLRMIQYNPGSVRVHGDIALQAGDYTFAWQGADGATVEVKARYTFGYRREKDG---WIIIEHHSSAMPKAPDALKPA 222
            T D KAV A    W+DTVT+ TDD P+KTA LYA DA  WGTVSE+VRDTP  +Y YFD+FAR+P LR+++Y P +VRV+GD A+QAG YTF+WQ  DG TVE +AR++F +RR+      W I+EHHSS+MP AP  LKPA
Sbjct:  184 TPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGTTVEKRARFSFTFRRDPSKPQQWAIVEHHSSSMPTAPAGLKPA 325

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BLAST of mRNA_L-elsbetiae_contig2024.6089.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 1.140e-50
Identity = 85/142 (59.86%), Postives = 107/142 (75.35%), Query Frame = 0

Query:   84 TADMKAVMAATEKWRDTVTLNTDDAPKKTAALYAPDALFWGTVSEQVRDTPAHVYQYFDFFARVPKLRMIQYNPGSVRVHGDIALQAGDYTFAWQGADGATVEVKARYTFGYRREKDG---WIIIEHHSSAMPKAPDALKPA 222
            T D KAV A    W+DTVT+ TDD P+KTA LYA DA  WGTVSE+VRDTP  +Y YFD+FAR+P LR+++Y P +VRV+GD A+QAG YTF+WQ  DG TVE +AR++F +RR+ +    W I+EHHSS+MP AP  LKPA
Sbjct:  329 TPDQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGDTVEKRARFSFTFRRDPNKPQQWAIVEHHSSSMPTAPAGLKPA 470

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BLAST of mRNA_L-elsbetiae_contig2024.6089.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 4.040e-50
Identity = 86/139 (61.87%), Postives = 107/139 (76.98%), Query Frame = 0

Query:   86 DMKAVMAATEKWRDTVTLNTDDAPKKTAALYAPDALFWGTVSEQVRDTPAHVYQYFDFFARVPKLRMIQYNPGSVRVHGDIALQAGDYTFAWQGADGATVEVKARYTFGYRREKDG----WIIIEHHSSAMPKAPDALK 220
            D  AV A T  W+DTVT  T DAPKKTAALYA D + WGTVSE+VRDTP  +Y YFD+FAR+P+LR+++Y P +VRV+GD A+QAG YTFA+QGADGATVE +AR++F +RR+       W I+EHHSS+MP AP  LK
Sbjct:  133 DKAAVAATTVVWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPNAPAGLK 271

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BLAST of mRNA_L-elsbetiae_contig2024.6089.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 4.760e-46
Identity = 74/138 (53.62%), Postives = 98/138 (71.01%), Query Frame = 0

Query:   86 DMKAVMAATEKWRDTVTLNTDDAPKKTAALYAPDALFWGTVSEQVRDTPAHVYQYFDFFARVPKLRMIQYNPGSVRVHGDIALQAGDYTFAWQGADGATVEVKARYTFGYRREKDG---WIIIEHHSSAMPKAPDALK 220
            D K V   T +W++ VTL T DAP+KTA LYA D + WGTVSE+VRDTP  +Y YFD+FAR+P LR+ ++ P S+RV+GD A +AG YTF WQG DG   E +AR++F +R + +    W I+EHHSS+MP +P  LK
Sbjct:  103 DRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSDPESPTSWTIVEHHSSSMPTSPLQLK 240

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig2024.6089.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig2024.6089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K7Z6_9PHAE	6.820e-81	62.67	DUF4440 domain-containing protein n=7 Tax=Ectocarp...	[more]
A0A6H5K6U8_9PHAE	1.120e-69	72.14	DUF4440 domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A6H5JT29_9PHAE	1.750e-58	65.03	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FUF8_ECTSI	9.470e-57	63.45	Similar to Uncharacterized protein conserved in ba...	[more]
A0A6H5K0Z5_9PHAE	1.350e-55	64.08	PDZ domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A6H5LB09_9PHAE	3.730e-52	61.97	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JX02_9PHAE	7.730e-52	59.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FUF9_ECTSI	1.140e-50	59.86	Similar to Uncharacterized protein conserved in ba...	[more]
D7FN21_ECTSI	4.040e-50	61.87	Similar to Uncharacterized protein conserved in ba...	[more]
A0A6H5JSB2_9PHAE	4.760e-46	53.62	DUF4440 domain-containing protein n=2 Tax=Ectocarp...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011944	Steroid delta5-4-isomerase	TIGRFAM	TIGR02246	TIGR02246	coord: 87..213 e-value: 1.2E-9 score: 36.2
None	No IPR available	GENE3D	3.10.450.50		coord: 79..223 e-value: 1.6E-37 score: 130.7
IPR027843	Domain of unknown function DUF4440	PFAM	PF14534	DUF4440	coord: 90..204 e-value: 5.3E-18 score: 65.4
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 81..213

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig2024	contig	L-elsbetiae_contig2024:4728..9180 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig2024.6089.1	mRNA_L-elsbetiae_contig2024.6089.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig2024 4393..9185 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig2024.6089.1 ID=prot_L-elsbetiae_contig2024.6089.1|Name=mRNA_L-elsbetiae_contig2024.6089.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=224bp
MMMNAASMGRTASRVGRVVAGKSEPSLQRGLSARAGSRNGLLSTRSALGG
VSQIATRFAVTKPLRQLPTGQIGSIACLSSGPVTADMKAVMAATEKWRDT
VTLNTDDAPKKTAALYAPDALFWGTVSEQVRDTPAHVYQYFDFFARVPKL
RMIQYNPGSVRVHGDIALQAGDYTFAWQGADGATVEVKARYTFGYRREKD
GWIIIEHHSSAMPKAPDALKPAQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011944	Steroid_delta5-4_isomerase
IPR027843	DUF4440
IPR032710	NTF2-like_dom_sf