prot_L-elsbetiae_contig2021.6080.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2021.6080.1
Unique Nameprot_L-elsbetiae_contig2021.6080.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length253
Homology
BLAST of mRNA_L-elsbetiae_contig2021.6080.1 vs. uniprot
Match: A0A6H5KJA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA8_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 5.460e-74
Identity = 116/176 (65.91%), Postives = 136/176 (77.27%), Query Frame = 0
Query:   69 VSFVVQGTMVSARRDYKGLFRCLEAMCTNGNDDFSLEAVGSSGNITSLLGSHPCTSSRYTEGRNLEYEEFYARIGQGDFVVTAAAGHDYEFDRATSSVPTALLLERPLVMSSSLLDAYPCLRNSRIHVMVANDDLCLNLQAAYNLTPREYDEMELEARDCKLQMWRQTRKTITDIV 244
            V FVVQG M S RR+Y  L RCLEAMC+ G D++ L AVG+ G++   +    C   R TE R+LEY EFYA I    FVVTAAAGHDYE+D+ATS+VPTALLLERPLV+SS+LLDAYPCLR SR+H MVANDDLCLNLQ AY+LT  EYDEMELEARDCKL+MWR  R+T+  + 
Sbjct:   84 VVFVVQGNMQSHRRNYPELTRCLEAMCSTGRDNYQLVAVGARGDLPDDVRRMQCVEQRTTEWRHLEYPEFYANISAAHFVVTAAAGHDYEYDKATSTVPTALLLERPLVISSTLLDAYPCLRKSRVHSMVANDDLCLNLQTAYDLTTEEYDEMELEARDCKLEMWRHARETVAGMA 259          
BLAST of mRNA_L-elsbetiae_contig2021.6080.1 vs. uniprot
Match: D8LSI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI3_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 1.730e-71
Identity = 110/168 (65.48%), Postives = 131/168 (77.98%), Query Frame = 0
Query:   77 MVSARRDYKGLFRCLEAMCTNGNDDFSLEAVGSSGNITSLLGSHPCTSSRYTEGRNLEYEEFYARIGQGDFVVTAAAGHDYEFDRATSSVPTALLLERPLVMSSSLLDAYPCLRNSRIHVMVANDDLCLNLQAAYNLTPREYDEMELEARDCKLQMWRQTRKTITDIV 244
            M S RR+Y  L RCLEAMC+ G D++ L AVG+ G++   + +  C   R TE R+LEY EFYA I  G FVVTAAAGH YE+D+ATS+VPTALLLERPLVMSS+LLDAYPCLR SR+H MVANDDLC+NLQ AY+LT  EYDEMELEARDCKL+MWR  R+T+  + 
Sbjct:    1 MQSHRRNYPELTRCLEAMCSTGRDNYQLVAVGARGDLPDDVSAMQCVEQRTTEWRHLEYPEFYANISAGHFVVTAAAGHGYEYDKATSTVPTALLLERPLVMSSTLLDAYPCLRKSRVHSMVANDDLCVNLQTAYDLTREEYDEMELEARDCKLEMWRHARETVAGMA 168          
BLAST of mRNA_L-elsbetiae_contig2021.6080.1 vs. uniprot
Match: A0A482SI13_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SI13_9ARCH)

HSP 1 Score: 75.9 bits (185), Expect = 1.840e-13
Identity = 42/100 (42.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:  131 RNLEYEEFYARIGQGDFVVTAA-AGHDYEFDRATSSVPTALLLERPLVMSSSLLDAYPCLRNSRIHVMVANDDLCLNLQAAYNLTPREYDEMELEARDCK 229
            R + +  FY  I + DF+VT A   ++Y   RA+SS+PTA++ E PLV+++ LL+ Y CL    IH  VA+ D C  L+ A  LT +E   M  E R CK
Sbjct:   15 RAVAHPYFYGAIARADFLVTFANPAYEYNITRASSSIPTAVMTEVPLVLTTDLLNKYDCLYGGSIHRRVADTDDCKALKNAIQLTDQERKTMREEIRRCK 114          
BLAST of mRNA_L-elsbetiae_contig2021.6080.1 vs. uniprot
Match: A0A482SHX3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SHX3_9ARCH)

HSP 1 Score: 78.6 bits (192), Expect = 4.470e-13
Identity = 50/176 (28.41%), Postives = 85/176 (48.30%), Query Frame = 0
Query:   71 FVVQGTMVSA-RRDYKGLFRCLEAMCTNGNDDFSLEAVGSSGNITSLLGSHPCTSSRYTEGRNLEYEEFYARIGQGDFVVTAAAGHDYEFDRATSSVPTALLLERPLVMSSSLLDAYPCLRNSRIHVMVANDDLCLNLQAAYNLTPREYDEMELEARDCKLQMWRQTRKTITDIVF 245
            F++QG +    RRD+  LF C+  +      D  L  +G    + + L      S+  T  +  +Y  F+  +   D+ +  +    YE  R TSS+PT+L+   P+++ + LL  Y CLRN  +H   +  D C +++A  +L      +M  E   C  Q+  ++R T+ DIVF
Sbjct:  214 FILQGILTPGKRRDFNRLFACMIEI--KRRHDIELVLIGKVATLGANLTIPLKLSNITTVVKWPDYLGFFRNVSSADYAILFSKFDFYEHGRITSSIPTSLVSNLPIILPNKLLSDYACLRNQYVHRATSMADDCSSVKAVLSLRHERQQQMRNEVAFCVKQLLIESRATLHDIVF 387          
BLAST of mRNA_L-elsbetiae_contig2021.6080.1 vs. uniprot
Match: A0A482SBI1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBI1_9ARCH)

HSP 1 Score: 62.4 bits (150), Expect = 7.780e-8
Identity = 48/172 (27.91%), Postives = 82/172 (47.67%), Query Frame = 0
Query:   72 VVQGTMVSARRDYKGLFRCLEAMCTNGND------DFSLEAVGSS------GNITSLLGSHPCTSSRYTEGRNLEYEEFYARIGQGDFVVTAAAGHD--YEFDRATSSVPTALLLERPLVMSSSLLDAYPCLRNSRIHVMVANDDLCLNLQAAYNLTPREYDEMELEARDCK 229
            V+ GT+   RRDY GLF C++ +  + ND      +F +   G S      G +   +  H           +L  + +   + Q +FV+  A  +   Y  +R +S+VPTAL +  PLV+  + L  Y CL++S +H  VA    C +++ A +L+  + + M  E   C+
Sbjct:   65 VLPGTIRYNRRDYTGLFTCVDEISKSANDSTQKSLNFKVVVTGRSYLKAADGRV--YIPEH--LRQLIEIQADLPLQSYLTLLAQANFVLLFANNNQLGYNTNRISSTVPTALGVTTPLVLPQATLSLYACLKSSSMHNRVAGKTNCDSMKNALSLSHADAERMRQETALCR 232          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2021.6080.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KJA8_9PHAE5.460e-7465.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSI3_ECTSI1.730e-7165.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A482SI13_9ARCH1.840e-1342.00Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A482SHX3_9ARCH4.470e-1328.41Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A482SBI1_9ARCH7.780e-827.91Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2021contigL-elsbetiae_contig2021:8254..12008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2021.6080.1mRNA_L-elsbetiae_contig2021.6080.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2021 6360..12335 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2021.6080.1 ID=prot_L-elsbetiae_contig2021.6080.1|Name=mRNA_L-elsbetiae_contig2021.6080.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=253bp
MRLPRPQPRPKEEHGGGGSGLFNTIAPSSPASPSSWSFSSSYEDDFGNSG
QEKETLGGGALRESARRRVSFVVQGTMVSARRDYKGLFRCLEAMCTNGND
DFSLEAVGSSGNITSLLGSHPCTSSRYTEGRNLEYEEFYARIGQGDFVVT
AAAGHDYEFDRATSSVPTALLLERPLVMSSSLLDAYPCLRNSRIHVMVAN
DDLCLNLQAAYNLTPREYDEMELEARDCKLQMWRQTRKTITDIVFRGRQQ
EE*
back to top