mRNA_L-elsbetiae_contig202.6070.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig202.6070.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 642 bits (1656), Expect = 1.810e-194 Identity = 375/593 (63.24%), Postives = 418/593 (70.49%), Query Frame = 3 Query: 5547 AILGAVTVSQLQFLATLSLVDDTGGEGSSLPGFADSFRWVNLWPPASFAEEFIDTSEGEGQMRRLQQEAEEGEGGGSATGCSWDGADANGLGALVFIGNLTLVFGALLLIFLLHVALVSAVESFWLANKRAKMEVARARRRGIPVGEYFYGP----REGSPQVVPEPDAN--------SVNTSSRSERRLRKAPSILNAAATAPSQRRPTKAPSLNAATSKPRAHLQRGWAGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLTRVESRLSPVAECREHSTSAWLHFPHVELVVLFFAFEGAVATQISVLREGGCPSVTIAAAAALFFYPVLMVAGVLRTYFVRVRPKTLIVFNPNTTDHDTSAGGGAEGAASAPRPGFFSRVKAGLAKDHSLFAWANKGEWETADTGDEDIQREGQWFRIGFEPLFVDFTQSGAWFVAFTLVELIALGCIGALVDDSVLQLSLFCGLHTLSFLLLVVFKPLANSVVNAMAAGLMVVDATCMALLAFSASRWEGTAAARKVDSAVMLLQLLALCALILPIYVDTSLVLLGAIRSRVRKSAVADPPNARTEVRRQAFTRVKAIAHRS 7289 AILGAV V+QLQFLATLSLVDDTGGE SSLPGFADSFRW NLWPPASFAEEFIDTS+ EGQ RRL GCSWDG+ GLG+LVFIGN LVFGAL+LIFLLHV+LVS VE++WLA KRAK E ARARR G+ +GEYF RE VPEPDA SV +S R RRLR+ PS+LNAAAT SQRR K P+L+A H R G LTR ESRLSPVAECREHS SAWLHFPHVELV LFFA+EGAVA+Q+S LRE GCP V IAA AL FYP+LM VLRT+FVRVRP TLIVF P D DT G AE A F S+V+AG +DHSLFAWANKG WETA+T +E +REGQWFRIGFEPLFVDFT+SGAWFVAFTLVE ALGCIGAL+D+SVLQLSLFC LHTLSFLLLVVF+P ANSV+NAM AGL+ +DA CMALLA SASRWEGTAAA KVDS VMLLQL ALCALI+PIY+DTSL+L+GAIRSR++KS P + RTE ++ V+ RS Sbjct: 758 AILGAVAVTQLQFLATLSLVDDTGGEDSSLPGFADSFRWANLWPPASFAEEFIDTSD-EGQQRRLXXXXXXX----XXXGCSWDGS-LGGLGSLVFIGNQGLVFGALVLIFLLHVSLVSGVEAYWLAKKRAKEEAARARRLGVSIGEYFSDTHVDGREHEQAPVPEPDARPSGGTTDISVASSFR-RRRLRRDPSLLNAAATG-SQRRLEKLPALDA------PHRSRKVRDGSWVAEDGEKKEARSDDNLSGTDCSDYDEEGGGGLGTLTRAESRLSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAGCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVVMLLQLFALCALIIPIYIDTSLILIGAIRSRLQKSTTTTPQHVRTEAEKEEDLFVRHFIRRS 1336
BLAST of mRNA_L-elsbetiae_contig202.6070.1 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE) HSP 1 Score: 407 bits (1045), Expect = 1.360e-121 Identity = 263/502 (52.39%), Postives = 301/502 (59.96%), Query Frame = 3 Query: 5928 NKRAKMEVARARRRGIPVGEYFYGP----REGSPQVVPEPDAN------SVNTSSRSERRLRKAPSILNAAATAPSQRRPTKAPSLNAATSKPRAHLQRGWAGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLTRVESRLSPVAECREHSTSAWLHFPHVELVVLFFAFEGAVATQISVLREGGCPSVTIAAAAALFFYPVLMVAGVLRTYFVRVRPKTLIVFNPNTTDHDTSAGGGAEGAASAPRPGFFSRVKAGLAKDHSLFAWANKGEWETADTGDEDIQREGQWFRIGFEPLFVDFTQSGAWFVAFTLVE------------LI------ALGCIGALVDDSVLQLSLFCGLHTLSFLLLVVFKPLAN--------------------SVVNAMAAGLMVVDATCMALLAFSASRWEGTAAARKVDSAVMLLQLLALCALILPIYVDTSLVLLGAIRSRVRKSAVADPPNARTEVRRQAFTRVKAIAHRS 7289 KR+K E ARARR G+ +GEYF RE VPEPDA ++ +S RRLR S+LNAAAT SQRR K P+L+ ++ R W GD LTR ESRLS VAECREHS AWLHFPHVELV LFFA+EGAVA+Q+S LRE GC V IAA AL FYP+LM VLRT+FVRVRP T IVF S+V+AG +DHSLFAWANKG WETA+T +E I+REGQWFRIGFEPLFVDFT+SGAWFVAFTLVE LI ALGCIGAL+D+SVLQLSLFC LHTLSFLLLVVF+P AN SV+NAM AGL+ +DA CMALLA SASRWEGT AA KVDSAVMLLQL A CALI+PIY+DTSL+L+ AIRSR++K P + RTE + V+ RS Sbjct: 21 QKRSKEEAARARRLGVSIGEYFNDTHVDGREHKQAPVPEPDARPSGGTTDISAASFFRRRLRTDRSLLNAAATG-SQRRRKKRPALDP-PNRSRKARDGSWVAGDGEKKATRSDDILSDTDCSDYDEEGGGGLG-----TLTRAESRLSSVAECREHSQFAWLHFPHVELVFLFFAYEGAVASQVSALREAGCLPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTPIVF--------------------------LSKVRAGWEEDHSLFAWANKGTWETAETDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANRLERKTQRVRFLDRLYFRAHSVINAMGAGLVGIDAVCMALLAVSASRWEGTVAAGKVDSAVMLLQLFARCALIIPIYIDTSLMLIEAIRSRLQKCTTTAPQHVRTEAEKVEDLFVRHFIRRS 489
BLAST of mRNA_L-elsbetiae_contig202.6070.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 382 bits (981), Expect = 2.440e-112 Identity = 237/556 (42.63%), Postives = 325/556 (58.45%), Query Frame = 3 Query: 5535 RAPAAILGAVTVSQLQFLATLSLVDDTGGEGSSLPGFADSFRWVNLWPPASFAEEFIDTSEGEGQMRRLQQEAEEGEGGGSATGCSWDGADANGLGALVFIGNLTLVFGALLLIFLLHVALVSAVESFWLANKRAKMEVARARRRGIPVGEYFYGPREGSPQVVPEPDANSVNTSSRSERRLRKAPSILNAAATAPSQRRPTKAPSLNAATSKPRAHLQRGWAGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLTRVESRLSPVAECREHSTSAWLHFPHVELVVLFFAFEGAVATQISVLREGGCPSVTIAAAAALFFYPVLMVAGVLRTYFVRVRPKTLIVFNPNTTDHDTSAGGGAEGAASAPRPGFFSRVKAGLAKDHSLFAWANKGEWETADTGDEDIQREGQWFRIGFEPLFVDFTQSGAWFVAFTLVELIALGCIGALVDDSVLQLSLFCGLHTLSFLLLVVFKPLANSVVNAMAAGLMVVDATCMALLAFSASRWEGTAAARKVDSAVMLLQLLALCALILPIYVDTSLVLLGAIRSRVR 7202 RAP+ + + ++Q+QFLATLSLVD TG E S L + RWVNLWPP S F E R QQ+ + C + A+ +GALVF+GN+ L LL I ++H+ LVSAVE++WL+ +RA E+ +A+RRGIP+ G R S +V PDA S P L A+A S + A S+ A G D + +R + + +A+CR S+S WL+FPH+EL+ L FAFEGA+A+Q++ +R GGCP V +A A+L YPVLM+ RT+ VRV P TLIVF P + + G + PR F S+V+ GL +DHS+FAWAN G WET +T DE+ REG FRIGFEPLFVDFT+ +WF + L+E+ + C LVDDSV+QL LFCGLH+LSFLLLV+F+P ANS++N M A L ++DA MA+LA +A RW+ T+ A+++D+AV++LQL+AL ALI+P+Y+D S V+LGAIR ++R Sbjct: 46 RAPSVTIAVLLLTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSVGRTFSSGGE-----RLFQQDG--------SRACGIEPTSASDIGALVFLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPI--RGLGARRAS-RVAHSPDAESD-------------PDELAASA------------SNDGAMSREHAAADSVDVGVDFEEDGIP---------------------------IRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKPVGEEENHGTDG------TVPRS-FLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMAMLADTAHRWQRTSRAKRMDTAVVVLQLVALVALIIPMYIDASTVILGAIREKIR 526
BLAST of mRNA_L-elsbetiae_contig202.6070.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 369 bits (948), Expect = 1.030e-99 Identity = 230/558 (41.22%), Postives = 307/558 (55.02%), Query Frame = 3 Query: 5535 RAPAAILGAVTVSQLQFLATLSLVDDTGGEGSSLPGFADSFRWVNLWPPASFAEEFIDTSEGEGQMRRLQQEAEEGEGGGSATGCSWDGADANGLGALVFIGNLTLVFGALLLIFLLHVALVSAVESFWLANKRAKMEVARARRRGIPVGEYFYGPREGSPQVVPEPDANSVNTSSRSERRLRKAPSILNAAATAPSQRRPTKAPSLNAATSKPRAHLQRGWAGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLTRVESRLSPVAECREHSTSAWLHFPHVELVVLFFAFEGAVATQISVLREGGCPSVTIAAAAALFFYPVLMVAGVLRTYFVRVRPKTLIVFNPNTTDHDTSAGGGAEGAASAPRPGFFSRVKAGLAKDHSLFAWANKGEWETADTGDEDIQREGQWFRIGFEPLFVDFTQSGAWFVAFTLVELIALGCIGALVDDSVLQLSLFCGLHTLSFLLLVVFKPLANSVVNAMAAGLMVVDATCMALLAFSASRWEGTAAARKVDSAVMLLQLLALCALILPIYVDTSLVLLGAIRSRVRKS 7208 R P+A L V ++QLQFLATLSLVD E S L F RW+NLW PA + C+++ A A+G+GALVF+GNL LV G LL IF +HVA VS VE+ WL KRA+ + ARRRG P+GE R G PD + +R +AP +P+ PS + + G G V R E+RLSPVA CREHSTSAWLHFPHVELV LFFAFEGAVA+ S +R CP + A AA+ YP+LM V RT VRVRP L++F D G G A + G SR K+ A+++SLF+WA+KG+WET T D + REG WFRIGFEP+FVD+T+ G WF+ +LVE A +G ++++SV+QL LFCGLH++ F +L+ KP ANSV+N + A + +DA M + A SA WEGT A ++++V++LQLL+L AL++P+Y+D +++GAIR+R+RK+ Sbjct: 1190 RRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDE------------------------CAFE-AGASGIGALVFVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFAR------QAP-------------QPSGTPSTLHEEESDMSDEEEGGRG-----------------------------------LVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAED-------GTNGDAPSRAGGLLSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTNRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKA 1661
BLAST of mRNA_L-elsbetiae_contig202.6070.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 372 bits (955), Expect = 1.080e-99 Identity = 237/584 (40.58%), Postives = 322/584 (55.14%), Query Frame = 3 Query: 5535 RAPAAILGAVTVSQLQFLATLSLVDDTGGEGSSLPGFADSFRWVNLWPPASFAEEFIDTSEGEGQMRRLQQEAEEGEGGGSATGCSWDGADANGLGALVFIGNLTLVFGALLLIFLLHVALVSAVESFWLANKRAKMEVARARRRGIPVGEYFYGPREGSPQVVPEPDANSVNTSSRSERRLRKAPSILNAAATAPSQRRPTKAPSLNAATSKPRAHLQRGWAGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLTRVESRLSPVAECREHSTSAWLHFPHVELVVLFFAFEGAVATQISVLREGGCPSVTIAAAAALFFYPVLMVAGVLRTYFVRVRPKTLIVFNPNTTDHDTSAGGGAEGAASAPRPGFFSRVKAGLAKDHSLFAWANKGEWETADTGDEDIQREGQWFRIGFEPLFVDFTQSGAWFVAFTLVELIALGCIGALVDDSVLQLSLFCGLHTLSFLLLVVFKPLANSVVNAMAAGLMVVDATCMALLAFSASRWEGTAAARKVDSAVMLLQLLALCALILPIYVDTSLVLLGAIRSRVRKSA-------VADPPNARTEVRRQAFTR 7265 R P+A L V ++QLQFLA LSLVD +GS L F RW+NLW PA E+ ++ GC ++ A+ +GALVF+GNL LV G LL IF LHVA+VS E+ WL KRA+ + ARRR P+ E R G +++ + + + S + R PS++ R + G V E+RLSPVA CREHSTSAWLHFPHVELV LFFAFEGAVA+ S +R CP + A AA+ YP+LM A V+RT FVRVRP L++F T D D + G G R GF SR K+ A+++SLF+WA+KG+WET T + +I REG WFRIGFEP+FVD+T+ G WF+ +LVE ++ +G ++D+S +QL LFCGL + FL+LV KP ANSV+N + A ++ +DA C LLA +A +WEGT+ A V+SAV +LQ+++LCAL++P+Y+D +++GAIR R+RK+ + P AR +R FTR Sbjct: 1419 RRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPADIGEDI------------------------ASDGCIFE-TGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGG--RIIRQTNPGLTDPSPFASRN----PSLVR--------------------DGSQRTDEEEG-----------------------------------GRELVPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFK--TYDEDGTNGNTPNG-----RGGFLSRFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRKRIRKALGKTGQQLTGESPEARDYIR--TFTR 1907
BLAST of mRNA_L-elsbetiae_contig202.6070.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 368 bits (945), Expect = 1.600e-98 Identity = 231/558 (41.40%), Postives = 311/558 (55.73%), Query Frame = 3 Query: 5535 RAPAAILGAVTVSQLQFLATLSLVDDTGGEGSSLPGFADSFRWVNLWPPASFAEEFIDTSEGEGQMRRLQQEAEEGEGGGSATGCSWDGADANGLGALVFIGNLTLVFGALLLIFLLHVALVSAVESFWLANKRAKMEVARARRRGIPVGEYFYGPREGSPQVVPEPDANSVNTSSRSERRLRKAPSILNAAATAPSQRRPTKAPSLNAATSKPRAHLQRGWAGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLTRVESRLSPVAECREHSTSAWLHFPHVELVVLFFAFEGAVATQISVLREGGCPSVTIAAAAALFFYPVLMVAGVLRTYFVRVRPKTLIVFNPNTTDHDTSAGGGAEGAASAPRPGFFSRVKAGLAKDHSLFAWANKGEWETADTGDEDIQREGQWFRIGFEPLFVDFTQSGAWFVAFTLVELIALGCIGALVDDSVLQLSLFCGLHTLSFLLLVVFKPLANSVVNAMAAGLMVVDATCMALLAFSASRWEGTAAARKVDSAVMLLQLLALCALILPIYVDTSLVLLGAIRSRVRKS 7208 R P+A L V ++QLQFLA LSLVD +GS L F RW+NLW PA E+ + + GC ++ A+ +GALVF+GNL LV G LL IF LHVA+VS E+ WL KRA+ + ARRR P+ E R G R +R+ T P P+ S N + + R+ GG E++LSPVA CREHSTSAWLHFPHVELV LFFAFEGAVA+ S +R CP + A AA+ YP+LM A V+RT FVRVRP L++F T D D G G A R GF S K+ A+++SLF+WA+KG+WET T + +I REG WFRIGFEP+FVD+T+ G WF+ +LVE ++ +G ++D+S +QL LFCGL + FL+LV KP ANSV+N + A ++ +DA LLA +A +WEGT+ A V+SAV +LQ+++LCAL++P+Y+D +++GAIR+R+RK+ Sbjct: 1378 RRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPAEIGEDIV------------------------SDGCIFE-TGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGG--------------------RMIRR---------TNPGLTDPSPFGSRNPSLVRDRSQRTDEEEGGRGLVPMCS--------------------------------ENQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFK--TYDED-----GTNGNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRNRIRKA 1842
BLAST of mRNA_L-elsbetiae_contig202.6070.1 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI) HSP 1 Score: 362 bits (928), Expect = 1.430e-96 Identity = 232/565 (41.06%), Postives = 314/565 (55.58%), Query Frame = 3 Query: 5535 RAPAAILGAVTVSQLQFLATLSLVDDTGGEGSSLPGFADSFRWVNLWPPASFAEEFIDTSEGEGQMRRLQQEAEEGEGGGSATGCSW---------DGADANGLGALVFIGNLTLVFGALLLIFLLHVALVSAVESFWLANKRAKMEVARARRRGIPVGEYFYGPREGSPQVVPEPDANSVNTSSRSERRLRKAPSILNAAATAPSQRRPTKAPSLNAATSKPRAHLQRGWAGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLTRVESRLSPVAECREHSTSAWLHFPHVELVVLFFAFEGAVATQISVLREGGCPSVTIAAAAALFFYPVLMVAGVLRTYFVRVRPKTLIVFNPNTTDHDTSAGGGAEGAASAPRPGFFSRVKAGLAKDHSLFAWANKGEWETADTGDEDIQREGQWFRIGFEPLFVDFTQSGAWFVAFTLVELIALGCIGALVDDSVLQLSLFCGLHTLSFLLLVVFKPLANSVVNAMAAGLMVVDATCMALLAFSASRWEGTAAARKVDSAVMLLQLLALCALILPIYVDTSLVLLGAIRSRVR 7202 R P+ + V + QLQFLATLSLV +TG E S L FA++ RW+NLWPPASFA F S L QE E+ + ++ L + VF+GNL L L +IFL+H+ + S +E++WLA + A+ VARA+RRG+PV E R +P +P++ S +R LR A + S +A +A P T S+LS +AECRE S S WLHFPHVEL+ L FAFEGAVA Q+S +RE V I A AL F+PVLM V+ T+F ++R K IVF PN D AE F S+V+ GL + +S+FAW+NKGEWE+ DT DE+ +R WFRIGFEPLFVDFT +G+WF + L+EL+A +G +VD+SVLQLSLF +T+SFLLLVV KP AN ++N M A + +DA CMA+LA +A +W GT A +VDS V+++QLL L A+I+P+YVDT+ +++G+IR ++R Sbjct: 2182 RRPSTTMAIVALGQLQFLATLSLVGNTGTEDSKLYDFANNLRWINLWPPASFARSFTPAS----MYGELDQEGEDAXXXXXXXXXXXXXXXXXEGVENEESGDLSSGVFVGNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARAQRRGVPVRELSA--RLSNPWAPFDPNSES-------QRSLRTAKT---------SGDDEGEADDTDAEEGMPE-----------------------------------------------TVGRSKLSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLLVLILAVLALLFFPVLMTFNVMCTFFGKIRSKKHIVFIPNADDAVE-----AESDLYTSVRSFGSKVRRGLKESYSMFAWSNKGEWESVDTPDEEDKRARDWFRIGFEPLFVDFTGAGSWFAVYALIELVANAVVGVVVDNSVLQLSLFGAFNTVSFLLLVVLKPFANGIINFMGAAVYGIDAACMAVLAVTADKWGGTERASQVDSVVVIVQLLTLAAIIIPLYVDTAFMMVGSIRDKLR 2672
BLAST of mRNA_L-elsbetiae_contig202.6070.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 338 bits (866), Expect = 5.250e-96 Identity = 213/578 (36.85%), Postives = 313/578 (54.15%), Query Frame = 3 Query: 5535 RAPAAILGAVTVSQLQFLATLSLVDDTGGEGSSLPGFADSFRWVNLWPPASFAEEFIDTSEGEGQMRRLQQEAEEGEGGGSATGCSWDGADANGLGALVFIGNLTLVFGALLLIFLLHVALVSAVESFWLANKRAKMEVARARRRGIPVGEYFYGPREGSPQVVPEPDANSVNTSSRSERRLRKAPSILNAAATAPSQRRPTKAPSLNAATSKPRAHLQRGWAGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLTRVESRLSPVAECREHSTSAWLHFPHVELVVLFFAFEGAVATQISVLREGGCPSVTIAAAAALFFYPVLMVAGVLRTYFVRVRPKTLIVFNPNTTDHDTSAGGGAEGAASAPRPGFFSRVKAGLAKDHSLFAWANKGEWETADTGDEDIQREGQWFRIGFEPLFVDFTQSGAWFVAFTLVELIALGCIGALVDDSVLQLSLFCGLHTLSFLLLVVFKPLANSVVNAMAAGLMVVDATCMALLAFSASRWEGTAAARKVDSAVMLLQLLALCALILPIYVDTSLVLLGAIRSRVRKSAVADPPNARTEVRRQAFTRV 7268 R+P+A + V SQ+QFLATLS VD TG E S+ ++ RWVNLWP SF+E R + E ++ T + + +G+L+F+GNL L G L++IF HV + S VE++W+A +RA+ ++R+ RRG+ + E Q D +S + S + ++P + A +P + GGD TR + + V++CRE S S WLH+PH+EL+ LFFAFEGAV +Q++ LR ++ AA A L YP+LMV V RT+ V V+P LIVF + T+ A A +P SR +GL D SLF+WA+KG+WET T ++ +R+ WFRIGFEPLF DFTQ+G+WF+ +TL+E L I LVD+S +Q LFC +H+L+F+LLV +KP ANSV+NA+AA +M+ DA CM +LA +A + GTA A ++D+AVM++Q L + L++P+YVDT++ + G IR+R K +V + N R+ R+ Sbjct: 142 RSPSATMAFVLTSQIQFLATLSFVDTTGAEESAFSDLTNNLRWVNLWPSESFSEGIAS--------RIISDEPDQPSDEDDTTPSAISQTVTSNVGSLLFMGNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVISRSLRRGLSLSEIPIALSGTWSQQPTMDDGSSAGSQSSG---IMQSPQRMERQAVSP-------------------------YDGGDSKSDEEEGGPRN------------------------TRPGNSIGQVSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALRSANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSETEE-----------ALAGKPSTLSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFANSVLNAVAAMVMLTDAVCMGMLALAAGTFNGTATAARMDTAVMVIQALCIAVLVIPLYVDTAVSIYGMIRNR--KGSVDERENEADRAEREVTKRL 646
BLAST of mRNA_L-elsbetiae_contig202.6070.1 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE) HSP 1 Score: 314 bits (805), Expect = 1.100e-87 Identity = 217/532 (40.79%), Postives = 281/532 (52.82%), Query Frame = 3 Query: 5535 RAPAAILGAVTVSQLQFLATLSLVDDTGGEGSSLPGFADSFRWVNLWPPASFAEEFIDTSEGEGQMRRLQQEAEEGEGGGSATGCSWDGADANGLGALVFIGNLTLVFGALLLIFLLHVALVSAVESFWLANKRAKMEVARARRRGIPVGEYFYGPREGSPQVVPEPDANSVNTSSRSERRLRKAPSILNAAATAPSQRRPTKAPSLNAATSKPRAHLQRGWAGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLTRVESRLSPVAECREHSTSAWLHFPHVELVVLFFAFEGAVATQISVLREGGCPSVTIAAAAALFFYPVLMVAGVLRTYFVRVRPKTLIVFNPNTTDHDTSAGGGAEGAASAPRPGFFSRVKAGLAKDHSLFAWANKGEWETADTGDEDIQREGQWFRIGFEPLFVDFTQSGAWFVAFTLVELIALGCIGALVDDSVLQLSLFCGLHTLSFLLLVVFKPLANSVVNAMAAGLMVVDATCMALLAFSASRWEGTAAARKVDSAVMLLQLLAL 7130 R P+A L V ++QLQFLATLSLVD E S L F RW+NLW A GQ + A E A A+G+ ALVF+GN+ LV G LL IF +HVA VS VE+ WL K A+ + ARRRG P+GE R PD + SR +AP +T LN S + + G G V R E+RL+PVA CREHSTSAWLHFPHVELV FFAFEGAVA+ S +R CP + A AA+ P+LM V RT VRVRP L++F T A GG G A + GF SR K+ +++SLF+WA+K +WETA T D I REG W RIGFEP+FV++T+ G WF+ +LVE +AL +G +V++S++QL LFCGL ++ FL+L+ KP ANSV N + A + +DA M + A SA WEGT A ++++V++LQLL+L Sbjct: 210 RRPSATLTFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWLAEV-----------GQNIASDESAFE--------------AGASGIRALVFVGNVALVKGILLAIFFIHVAAVSGVEALWLTKKPARENLDAARRRGAPIGELQARLRGVRIICRTNPDLADPSPFSR------QAPHASGTLST------------LNEEESD-MSDEEEGGRG-----------------------------------RVPMRSENRLNPVATCREHSTSAWLHFPHVELVFQFFAFEGAVASFASAIRNYECPKIFYTAIAAMVLCPLLMFVTVFRTLLVRVRPNVLLIFK-------TYAEGGTSGDAPSRAGGFLSRFKSSWEENYSLFSWADKRQWETAQTPDRQISREGDWCRIGFEPVFVEYTKRGTWFIVISLVEWVALALVGVMVENSIVQLVLFCGLPSVIFLILMFLKPFANSVTNNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSL 655
BLAST of mRNA_L-elsbetiae_contig202.6070.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE) HSP 1 Score: 325 bits (832), Expect = 6.570e-86 Identity = 216/565 (38.23%), Postives = 302/565 (53.45%), Query Frame = 3 Query: 5535 RAPAAILGAVTVSQLQFLATLSLVDDTGGEGSSLPGFADSFRWVNLWPPASFAE---EFIDTSEGEGQMRRLQQEAEEGEGGGSATGCSWDGADANGLGALVFIGNLTLVFGALLLIFLLHVALVSAVESFWLANKRAKMEVARARRRGIPVGEYFYGPREGSPQVVPEPDANSVNTSSRSERRLRKAPSILNAAATAPSQRRPTKAPSLNAATSKPRAHLQRGWAGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLTRVESRLSPVAECREHSTSAWLHFPHVELVVLFFAFEGAVATQISVLREGGCPSVTIAAAAALFFYPVLMVAGVLRTYF--------VRVRPKTLIVFNPNTTDHDTSAGGGAEGAASAPRPGFFSRVKAGLAKDHSLFAWANKGEWETADTGDEDIQREGQWFRIGFEPLFVDFTQSGAWFVAFTLVELIALGCIGALVDDSVLQLSLFCGLHTLSFLLLVVFKPLANSVVNAMAAGLMVVDATCMALLAFSASRWEGTAAARKVDSAVMLLQLLALCALILPIYVDTSLVLLGAIRSR 7196 R P++ + V SQ+QFLATLS VDDTG EGS+L G + RWVNLWP SF+E ++ +E E E+G+ + G SW + +G+ +F+GNL L G ++IF +H+ L SAVE++WLA +RA+ E+ RA + + S ++++ S R ++P ++ A PS ++ ++Q TR S + V+ECRE S SAWLH+PH+ELV LFFAFEGAV +Q+S LR +V AA A L + +A + F VRVR LIVF N TD ++ + +S++ GL KD SLFAWA+KG W T T DED +R+ WFRIGFEPL+ DFTQ+G+WF +TL+E L CI LVD+S +Q LFC LH+++F+LLVV KP ANSV+N M A +M+ DA CM +LA SA + TAAA ++D VM+ Q L + L++P+YVDT L++ GAIR+R Sbjct: 98 RNPSSTMALVLTSQIQFLATLSFVDDTGVEGSALSGLTKNLRWVNLWPSQSFSEGVASWVLCNEPEPTSGEDDDSEEDGDS--TQRGISW--TVISDVGSFLFMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRARNEIPRALGGDL---------------------STSGSSTAWSGTRAIQSPQLMEHQAL----------PSWDSTGRNDSTNVQEA-------------------------------------ARTNTRAGSSIGQVSECRELSQSAWLHYPHLELVFLFFAFEGAVTSQVSALRSTSSSTVFYAAVATLTGCNLSRIATMSILGFILFDVRGRVRVRSDALIVFTSNKTDEGSTG-----------KSTLYSKMVTGLKKDSSLFAWADKGHWNTVQTADEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIEWATLACIAVLVDNSAVQCGLFCALHSMTFILLVVCKPFANSVLNTMGAIVMLTDAVCMGMLALSAGTFRMTAAADRIDIVVMVAQHLCIAVLVVPLYVDTLLLVWGAIRNR 579 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig202.6070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig202.6070.1 >prot_L-elsbetiae_contig202.6070.1 ID=prot_L-elsbetiae_contig202.6070.1|Name=mRNA_L-elsbetiae_contig202.6070.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=2382bp MRSTLGSAAVGALVVAGRFRAVSSTEMRIEGRSGGAAAIRPRPERLREGQback to top mRNA from alignment at L-elsbetiae_contig202:2792..33683- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig202.6070.1 ID=mRNA_L-elsbetiae_contig202.6070.1|Name=mRNA_L-elsbetiae_contig202.6070.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=30892bp|location=Sequence derived from alignment at L-elsbetiae_contig202:2792..33683- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig202:2792..33683- >mRNA_L-elsbetiae_contig202.6070.1 ID=mRNA_L-elsbetiae_contig202.6070.1|Name=mRNA_L-elsbetiae_contig202.6070.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=14292bp|location=Sequence derived from alignment at L-elsbetiae_contig202:2792..33683- (Laminarionema elsbetiae ELsaHSoW15)back to top |