prot_L-elsbetiae_contig2019.6069.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2019.6069.1
Unique Nameprot_L-elsbetiae_contig2019.6069.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1174
Homology
BLAST of mRNA_L-elsbetiae_contig2019.6069.1 vs. uniprot
Match: A0A6H5KD78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD78_9PHAE)

HSP 1 Score: 880 bits (2275), Expect = 5.920e-299
Identity = 612/1263 (48.46%), Postives = 716/1263 (56.69%), Query Frame = 0
Query:    9 DLSKRKCKFELEKAAAGGWHQGRLFYYRLPVDRPGLYTVRLTVVSYHNDERRRDGVKLGLEDLMEVRLQCLKTIGRIVVPIMRGKGVVAMGFDESMGVVEFSTVALGGEILLEVEGIYSCIGLSLVEVFFHDEQK--------------------NAATSLETLRAAWDGGAGAFCAQKYASDANRRSPVSA---SSSTAQEQRYFDEWARRERLEDSAGRFCKPRTAPQHGERGWTWAGHSDRAERE----SRKMEEGTIFIPPSNTKPGEEETGSSFKAIL--DGVL--AQKDGKPLSLAEWKQVSVVAGG---GIGXXXXXXXXXXXXXXXXXXXXXXLSLHSYRRHRWRAQPSTAPYPXXXXXXXXIPTVCNAVDKNELTQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVFADGNSSGPSRRSLLALSVVAEEVAGPVATSPKGSFSYSRKAQPLDGGEA----AAKEVARAEEVPDTVVI----------------IRRGASAKNK-LVNPT---PPPRCPSRLVEFVEEALHVEAR-----SKNTAAAAAASPLPSPRAGHHAHIAAATTXXXXXXXXXXSDDGTNGDATQKDGRNGGVFAGRRPAPSSASGRSPPGP------PPAIVAALIADGAAAAVNRARSRAERGDGQGNGLGRERWEATLGRGVLPTWLGGVAEVEW--EEGPTNSKAATAAVP-----------MPRSLVAQQALGSGFQAIAAYRAHEVEGWKGGGPSRSTAGPQNGGXXXXXXXSAPGEP------RLLPMRFTGFTWDGVTVVAKETVAGCAITANPVISALSTAPDGALGLSEWGQVGSGG----------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKTRS-PCLSVEAAFVPTESIVVDIVVPVSAGLVPRLRTLLPQMERLAKGSGCTPHPPSHPLAPQCNEADYYPPAFWPERLGVRGLASSGWASGLDLSGVLAAKGRGRRLRGG-GEAEGSGGPGEKNGKKPADAAAAAAGRREGSNVRVVVVTEDPGVEALLEEYDVETVFVLSKAPFSKAVAIQDASSSIPDDHIMFIHDADLFPPCTLPDALRQTVVQGVQAVNLMLAYENQPVPGKCAYHWSTFGPMAMYASDFRAAGGIADANSGRWGYEDTAFVHKVMLGDSPLGVLRVHLPGLVHRWHEITPWKCQTWVWGGLPAGRDGGE 1165
            D ++  CK+ELE+AA GGWHQG+LFYYRLPV++PGLYTVRLTVV +HND+RR DG+ LG+++LMEVRLQC+ + G +VVP  +    +     ESMGVVEF TVALGGEILLE EGIY+CIGLSL+E F+HDEQ+                     AA  L  LRAAWD GAG  CA+KY+S+A RR  + A   SS+TAQEQ+YFDEWARRERLEDS GR+C+P   P+ GE GWTWA HS+R  RE    +R  EE       +     +  + SS ++++  +  +  A+K+G  L  A+      V        G                      L+         +  P  AP          +  V   VD  ELTQR                                                                  XX  XXXX     G    P RR+LL  +   E +    AT+  GS +Y RK      G      AA +  + +                        +  G  AK +  +NP    PPPRCPSRLVE +EEAL VEAR     S+    A A  P P+ R G    +A A+T XXXXXXX  + DG +             +   R   S+A       P       PA+  AL+ DGAAAA +RARSRAERGDG+GNG  RE WE +LG GVLP+WL G+A  +W  E       AA  AV            +PRS+VAQQALGSGFQAIAAYRAHEV GWKGGG S S      GG       S    P       LLP+RFTGFTWDG TVVAKET  GCA TA P  + LST        SEWG+ G                    XXXXXXXXXXXXXXXX                G+ R  PCL VEAAFVPT  IVVDIVVPVSAGLVPRL+TLLPQME+LAKGSGCTPH PS PLAPQCN+AD Y PAFWPE L +RG + S W+ GLD S +L     G  LRGG  E++G+       GK  A A    A  +E S+ RVVV TEDP VEA+LE YDVETVFVLS +PFSKA+AIQDAS+ IPDDHIMF+HDADLFPPCTLPDALRQTVVQGVQAVNL+LAYENQPVPG C Y  STFGPMAMYASD+RA GGIADANSGRWGYEDTAFVHKVMLG+ PLGVLRVHLPGLVHRWHEITPWKC  WVWGG P+G    +
Sbjct:    7 DGNQENCKYELEQAAKGGWHQGQLFYYRLPVEQPGLYTVRLTVVFFHNDQRRGDGITLGVDELMEVRLQCVASRGHVVVPAKK----IGKDMSESMGVVEFHTVALGGEILLEAEGIYTCIGLSLIETFYHDEQQLQAPVVPGRHNKDEVRIPHTMAAAELAPLRAAWDDGAGTLCAEKYSSEATRRGSLQAMSPSSTTAQEQKYFDEWARRERLEDSVGRYCRPHRPPRWGEPGWTWADHSERVLRERAEATRTEEENKARRQEAANGHAKVSSASSVRSVIFYEAAVEAAKKNGVSLGTAKILAAEAVEKALEDANGQPLTLVQGKESNEPPEPLPVPKLAQPRAGAVEQKTPPGPAP-------KAKVAWVGREVDTVELTQRRRQLLSVAAASTPIAADGKPAGGDSAIRQASTAQDQRQGDLVNKTGSSNAAGSLSGGGGDVAGTLSXXEDXXXXXXXXXG---APRRRALLGSANDIERIG---ATTKGGSVAYKRKTPSKKSGPGXXXXAAVDDGKGQADSGKXXXXXXXXXXXXXXXXXGTVEGGDDAKRRGRINPEDPIPPPRCPSRLVELLEEALRVEARRPAAPSRRIPPAGAGGPAPAAREG--TPVAVASTAXXXXXXXGYASDGGSKAGNXXXXXXXXXWRRLRLWQSTAPSEEEEKPGHDSNWSPAVAVALLQDGAAAAEDRARSRAERGDGKGNG--RELWEPSLGGGVLPSWLSGIA-ADWGREIAAKQQAAAAGAVXXXXXXXXXVAVLPRSVVAQQALGSGFQAIAAYRAHEVTGWKGGGDSGSVQNKAEGGSAGSGVGSTTEPPVGEDEKTLLPVRFTGFTWDGSTVVAKETAPGCARTAKPPPTKLSTPGQKLFEPSEWGEDGDRSLPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQARRGMAESGDGGGMEGRLRQQPCLKVEAAFVPTREIVVDIVVPVSAGLVPRLKTLLPQMEKLAKGSGCTPHHPSAPLAPQCNDADRYAPAFWPETLAIRGQSPSEWSFGLDYSEILEGSPAGGGLRGGTAESDGT------KGKGHAAAXXXVAAVKESSSFRVVVATEDPAVEAMLENYDVETVFVLSSSPFSKALAIQDASTVIPDDHIMFVHDADLFPPCTLPDALRQTVVQGVQAVNLLLAYENQPVPGNCIYPLSTFGPMAMYASDYRAVGGIADANSGRWGYEDTAFVHKVMLGEKPLGVLRVHLPGLVHRWHEITPWKCMVWVWGGAPSGSSSSD 1241          
BLAST of mRNA_L-elsbetiae_contig2019.6069.1 vs. uniprot
Match: D7G308_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G308_ECTSI)

HSP 1 Score: 458 bits (1178), Expect = 2.100e-138
Identity = 448/1262 (35.50%), Postives = 523/1262 (41.44%), Query Frame = 0
Query:    9 DLSKRKCKFELEKAAAGGWHQGRLFYYRLPVDRPGLYTVRLTVVSYHNDERRRDGVKLGLEDLMEVRLQCLKTIGRIVVPIMRGKGVVAMGFDESMGVVEFSTVALGGEILLEVEGIYSCIGLSLVEVFFHDEQK--------------------NAATSLETLRAAWDGGAGAFCAQKYASDANRRSP---VSASSSTAQEQRYFDEWARRERLEDSAGRFCKPRTAPQHGERGWTWAGHSDRAERE----SRKMEEGT------------IFIPPSNTKPGEEETGSSFKAILDGVLAQK-----DGKPLSLAEWKQVSVVAGGGIGXXXXXXXXXXXXXXXXXXXXXXLSLHSYRRHRWRAQPSTAPYPXXXXXXXXIPTVCNAVDKN---------------------ELTQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVFADGNSS--------------GPSRRSLLALSVVAEEVAGPVATSPKGSFSYSRK-------------AQPLDG--------GEAAAKEVARAEEVPDTVVIIRRGASAKNKLVNP---TPPPRCPSRLVEFVEEALHVEAR-----SKNTAAAAAASPLPSPRAGHHAHIAAATTXXXXXXXXXXSDDGTNGDATQKDGRNGGVFAGRRPAPS------SASGRSPPGPPPAIVAALIADGAAAAVNRARSRAERGDGQGNGLGRERWEATLGRGVLPTWLGGVAEVEWEEGPTNSKAATA--------------------AVPMPRSLVAQQALGSGFQAIAAYRAHEVEGWKGGGPSRSTAGPQNGGXXXXXXXSAPGEP------RLLPMRFTGFTWDGVTVVAKETVAGCAITANPVISALSTAPDGALGLSEWGQ----------VGSGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKTRS-PCLSVEAAFVPTESIVVDIVVPVSAGLVPRLRTLLPQMERLAKGSGCTPHPPSHPLAPQCNEADYYPPAFWPERLGVRGLASSGWASGLDLSGVLAAKGRGRRLRGGGEAEGSGGPGEKNGKKPADAAAAAAGRREGSNVRVVVVTEDPGVEALLEEYDVETVFVLSKAPFSKAVAIQDASSSIPDDHIMFIHDADLFPPCTLPDALRQTVVQGVQAVNLMLAYENQPVPGKCAYHWSTFGPMAMYASDFRAAGGIADANSGRWGYEDTAFVHK 1119
            D  K+ CK ELE+AA GGWHQG+LFYY                               G E  ME R +                                          L     Y+CIGLSL+E F+HDEQ+                     AA  L  LRAAWD GAGA CA+KY+S+A RR     VS SS+TAQ+Q+YFDEWARRERLEDSAGR+C+P   P+ GE GWTWA HS+R  RE    +RK EE              +F   +     +         IL     +K     +G+PL+L + K+ ++ AG                          +SL   R  R + Q +  P PXXXXXXXX      AV++                      ELTQR   XXXXXXXXXXXX                                                 XX           A GN S               P RR+LL  +   E +    AT+  GS +Y RK             A   DG        G+AAA+      E  +   +     + +   +NP   TPPPRCPSRLVE +EEAL VEA+     S+    AAA  P P+ + G    +     XXXXX         T G+                            SG      P A+  AL+ DGAAAA +RARSRAERGDG+GNGLGRE WE +LG GVLP+WL G+A     E     + A A                       +PRS+VAQQALGSGFQAIAAYRAHEV GWKGGG S S      GG       S    P       LLP+RFTGFTWDG TVVAKET  GCA TA P  + LST        SEWG+           G G G                                G+ R  PCL VEAAFVPT  IVVDIVVPV                                                                                                                                         ETVFVLS +PFSKA+AIQDAS++IPDDHIMF+HDADLFPPCTLPDALRQTVVQGVQAVNL+LAYEN PVPG C Y  STFGPMAMYASDFRA GGIADANSGRWGYEDTAF+HK
Sbjct:  109 DGKKKNCKDELEQAAKGGWHQGQLFYYS------------------------------GGE--MESRWE------------------------------------------LTSSWSYTCIGLSLIETFYHDEQQLQAPVVPGRHNKDEARLPHTMAAAELAPLRAAWDDGAGALCAEKYSSEATRRGSLQAVSTSSTTAQDQKYFDEWARRERLEDSAGRYCRPHRPPRWGEPGWTWADHSERVLRERAEATRKEEENKARRQEAADGHAKMFYEAAVEAAKKNGVSPGTAKILAAEAVEKALEGTNGQPLTLVQGKEAAMAAG-----------------------RVAISLLKARGGRNKQQGNEPPVPXXXXXXXXXXXHTGAVEQKAPAGPAPKAEVAGVGREVEIVELTQRRGRXXXXXXXXXXXXSTPIAADGKPAGGASGIRQASTAAGQDQQRGDLVAKTGSSNAAGSLLSGXXGD---------AAGNLSXXXXXXXXXXXXXGAPRRRALLGSANDIERIG---ATTKGGSVAYKRKTPSKKSGPGXXXAAAVDDGKGLADSEKGKAAAEGXXXXXEEKEKGTVEGGDDAKRGGRINPEDPTPPPRCPSRLVELLEEALRVEAKRPASLSRRIPPAAAGGPAPAAKEGAPVAVXXXXXXXXXXSGYAAVGGSTAGNXXXXXXXXXXXXXXXXXXXXXXXXXXEKSGHDSNWSP-AVAVALLQDGAAAAEDRARSRAERGDGKGNGLGRELWEPSLGGGVLPSWLSGIAADWGREIAAKQQTAAAXXXXXXXXXXXXXXXXXXXXVAMLPRSVVAQQALGSGFQAIAAYRAHEVTGWKGGGVSGSVQNKAEGGSAGSGVGSTTEPPVGGDEKPLLPVRFTGFTWDGSTVVAKETAPGCARTAKPPPTKLSTPRQRLFEPSEWGEDDDRSLPPSSEGGGRGRGGVAGSLDGGDAATQARRGMAESGDVGGGMEGRLRQQPCLKVEAAFVPTRDIVVDIVVPV-----------------------------------------------------------------------------------------------------------------------------------------ETVFVLSSSPFSKALAIQDASTAIPDDHIMFVHDADLFPPCTLPDALRQTVVQGVQAVNLLLAYENHPVPGNCIYPLSTFGPMAMYASDFRAVGGIADANSGRWGYEDTAFLHK 1123          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2019.6069.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KD78_9PHAE5.920e-29948.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G308_ECTSI2.100e-13835.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008428Chondroitin N-acetylgalactosaminyltransferasePFAMPF05679CHGNcoord: 1084..1145
e-value: 1.5E-6
score: 27.4
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 978..1150
e-value: 2.2E-7
score: 32.9
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 983..1149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 296..318
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..295
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 319..365
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 366..384
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 385..1173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2019contigL-elsbetiae_contig2019:7361..18837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2019.6069.1mRNA_L-elsbetiae_contig2019.6069.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2019 6657..18908 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2019.6069.1 ID=prot_L-elsbetiae_contig2019.6069.1|Name=mRNA_L-elsbetiae_contig2019.6069.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1174bp
MIAGGGSDDLSKRKCKFELEKAAAGGWHQGRLFYYRLPVDRPGLYTVRLT
VVSYHNDERRRDGVKLGLEDLMEVRLQCLKTIGRIVVPIMRGKGVVAMGF
DESMGVVEFSTVALGGEILLEVEGIYSCIGLSLVEVFFHDEQKNAATSLE
TLRAAWDGGAGAFCAQKYASDANRRSPVSASSSTAQEQRYFDEWARRERL
EDSAGRFCKPRTAPQHGERGWTWAGHSDRAERESRKMEEGTIFIPPSNTK
PGEEETGSSFKAILDGVLAQKDGKPLSLAEWKQVSVVAGGGIGGDAAAAA
AAAAASAACAPPLLLLSLHSYRRHRWRAQPSTAPYPLPPPAPRPIPTVCN
AVDKNELTQRRRRRRLSAPVAAAAAAAAAAPMAAGNNVPAQGRGRHDGGG
GGSVRSRSRQGGALLPPPPLGSPDREEQEAAGGSSVFADGNSSGPSRRSL
LALSVVAEEVAGPVATSPKGSFSYSRKAQPLDGGEAAAKEVARAEEVPDT
VVIIRRGASAKNKLVNPTPPPRCPSRLVEFVEEALHVEARSKNTAAAAAA
SPLPSPRAGHHAHIAAATTAAAADAPAADSDDGTNGDATQKDGRNGGVFA
GRRPAPSSASGRSPPGPPPAIVAALIADGAAAAVNRARSRAERGDGQGNG
LGRERWEATLGRGVLPTWLGGVAEVEWEEGPTNSKAATAAVPMPRSLVAQ
QALGSGFQAIAAYRAHEVEGWKGGGPSRSTAGPQNGGSAGGGGGSAPGEP
RLLPMRFTGFTWDGVTVVAKETVAGCAITANPVISALSTAPDGALGLSEW
GQVGSGGGSGGGGDSSGEDGGGDRVGGGAGGGRRGGERDGGKTRSPCLSV
EAAFVPTESIVVDIVVPVSAGLVPRLRTLLPQMERLAKGSGCTPHPPSHP
LAPQCNEADYYPPAFWPERLGVRGLASSGWASGLDLSGVLAAKGRGRRLR
GGGEAEGSGGPGEKNGKKPADAAAAAAGRREGSNVRVVVVTEDPGVEALL
EEYDVETVFVLSKAPFSKAVAIQDASSSIPDDHIMFIHDADLFPPCTLPD
ALRQTVVQGVQAVNLMLAYENQPVPGKCAYHWSTFGPMAMYASDFRAAGG
IADANSGRWGYEDTAFVHKVMLGDSPLGVLRVHLPGLVHRWHEITPWKCQ
TWVWGGLPAGRDGGEGSDGGIVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008428Chond_GalNAc
IPR029044Nucleotide-diphossugar_trans