mRNA_L-elsbetiae_contig2016.6066.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2016.6066.1
Unique NamemRNA_L-elsbetiae_contig2016.6066.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig2016.6066.1 vs. uniprot
Match: D7FQL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQL4_ECTSI)

HSP 1 Score: 424 bits (1090), Expect = 7.890e-125
Identity = 454/1025 (44.29%), Postives = 521/1025 (50.83%), Query Frame = 1 
Query:  925 RDIMEEDSSRIALVG-RNREGVGFGREASDSSRFRLQGRXXXXXXXXXXXXXXXXXXXSFPSEMLPGDERKPASRAVATALSS--PPRVLLSVSSTAEDATFCDL---------------EDNLSICSSLPPMTGS----------ATITTDLIFEESSLEDSGASVSQASSTERNGNDNGGGGGCGKSEXXXXXXXXXXXXXXXSRQRSGV---------SSEAFVRTRSMGRGLSNLMARIHEQEECKGGLLESQRDPLPRGIGLSRPSSGEMFRVQELSDSDQDGHEAGLT--SPPLSSSPTAGLGAASAVMNVGHQRAALELRNLTLEREVEQLKTHLRNLGGEDVAVSDPH--GVR-RPRPRPQHRIGERTLLHRTAAPSPLSEASASVSHRGGGGCGINGRSGS-------DVSVRGQAE-AGRARRGDPTSANPSRKSPAGXXXXXXXXXXXXXXXXXXXXXXXIGSSSMFGVQRVQPAPSPPKXXXXXXXXXXXXXXXXXXXXXXXXXXPARQLRTNRLRSPTSASAAASTVEVLTPQVGRGSETARS-RGIGDGGLDVVGRTSQMIHINKNEE----DSSQDP---LSGEA-EPRPLPRLRREEASLK----AKPRASKTPINLGGMVSGIKHTLLNRRRSTGDKNTQLVDPAGKLSAVRGSQAFGGDKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGKDFDQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTSTAAP------AVERQRGRDASGGFREIGRAAEGAEEEGSLKAAGTKHTAADVKATATTETFD------ETVGEPRATGAVQMLAAVAMTMECGAAGGGTGGV--------KGADDAPNDSPRYGRWPATLDAQWAEVEFMLCHEVDCEESLQYTIEATEAGLVFMDKLEEKAQELGILKGQLSRWLLPFNTDTSVDEQQAATPRRFQESLLASSATSGTAG--------------------SGSGGTLTEEEAEYLTAGARRVRQLVRLKIADD 3690
            R  ME  S+ +A     +  G  FGR +S+  R R  G            XXXXXXXX+ PS    GD R P     +TA S+  PP++ L V+S AED T  DL               ++ LS+CSSLPPM G+          A   TDLIFEESS EDS ASVSQASS ER G +  G G      XXXXXXXXXXXXXXX                SS+ FVRTRS+GRGLSNLMARIHEQ+E  G  LESQ  P PR +  SR  +GE+FRVQELSD D+DG E+ LT  SPP     T       A  N+GHQRA+LELRNL LEREVEQLKT+LR++GG+DV  +D H  GVR RPRP  Q R+GE+ LLH                                      DV+ RG+A+  GRARR            P+                                            XXXXXXXXXXXXXXXXX         P R+LR++RLRSP  A A AS  +    Q G G++T       G G LD  G TS+  H ++ E+    DS Q P   LSGE  E RPLPRLR EEA  +     K R +K P+NLGGMVSG+KHTLL+RRRS GDK T LV PAG  ++   + A      XXXXXXX                           + +QT                               T++ A       A ERQRG    GG    GR   GA E      A  K    +  ++ATT T        E  GE    G   +   VA T    A                +  D A N  P YGRWPATLDA+WAEVEFMLCHEVDCEESLQYTIEATEAGLVFMDKLEEKAQELG+LKGQLSRWLLPFN DTSV+EQQAATPRRFQESLLASSATS                        SGSGG LTEEEAEYLT GARRVRQLVR  I  D
Sbjct:  142 RSRMEAGSAGVAATTTESGGGAAFGRASSEGLRVRQPG-GRRAGMRAVRGXXXXXXXXTLPSSTADGD-RVPVHGGASTASSTSPPPQLQLPVAS-AEDTTCFDLAESRSVSSANSAGVVQEQLSVCSSLPPMGGTGNGTXXXXXXAATATDLIFEESSFEDSVASVSQASSAERCGIEALGSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDEFVRTRSVGRGLSNLMARIHEQDEFGGSTLESQWKPRPRDLD-SRSGTGEVFRVQELSDCDEDGLESVLTTSSPPAV---TVAXXXTVAAANMGHQRASLELRNLALEREVEQLKTYLRSMGGDDVINTDRHLHGVRPRPRPHQQQRVGEQVLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTARGKADDVGRARRWSDKWRGGGAPDPSAVVVHAGMHSPRAAGEPDSGAATAQDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAESPATSSPVRKLRSDRLRSPVCA-AGASVAQAPPQQGGVGTDTVPLLEATGVGALDGFGGTSKSDHRDEEEKPVLGDSRQTPRHDLSGEVGESRPLPRLRVEEAERRRGVPGKARPAKKPMNLGGMVSGMKHTLLSRRRSAGDKVTPLVVPAGTRASPAPTPAXXXXXXXXXXXXXKGKEVTFAAADPDAHDSATADDKHETTNTEQTAGKTKQRGSHRRARGGERGSAVSSSSPVPPQTASTAXXXXXTMAKERQRGPGVFGGPTRGGRGG-GAGEGTPASGACAKQALTEGISSATTATLPFEHLPTEASGEQ---GVETVTEGVAGTSAPAAXXXXXXXXXXXXXXXDEAEDIAENSMPVYGRWPATLDARWAEVEFMLCHEVDCEESLQYTIEATEAGLVFMDKLEEKAQELGVLKGQLSRWLLPFNADTSVEEQQAATPRRFQESLLASSATSXXXXXXXXXXXXXXXXXXXXXXXXSGSGG-LTEEEAEYLTDGARRVRQLVRKGIGAD 1153
[Close]
BLAST of mRNA_L-elsbetiae_contig2016.6066.1 vs. uniprot
Match: A0A6H5L5X6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5X6_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 8.040e-61
Identity = 251/615 (40.81%), Postives = 319/615 (51.87%), Query Frame = 1 
Query:  415 WKHLRGNHRVSSSKLERRGGSGATTAVVETIIDTIRSSPARPRHGRRNLHDPSSKVRPSAAXXXXXXXG-----ASRGLVRREEEDQVEKPWGGRK-EHSSRGAPRS----EERTLPTVKCWEGSAITADGGGSEGGGETRKQRPRQRTVRSRSHADTASPQRTENAGRNSTGIT---GGRNSRDI--MEEDSSRIAL-VGRNREGVGFGREASDSSRFRLQGRXXXXXXXXXXXXXXXXXXXSFPSEMLPGDERKPASRAVATALSS--PPRVLLSVSSTAEDATFCDL---------------EDNLSICSSLPPMTGS---------ATITTDLIFEESSLEDSGASVSQASSTERNGNDNGGGGGCGKSEXXXXXXXXXXXXXXXS---------RQRSGVSSEAFVRTRSMGRGLSNLMARIHEQEECKGGLLESQRDPLPRGIGLSRPSSGEMFRVQELSDSDQDGHEAGL--TSPPLSSSPTAGLGAASAVMNVGHQRAALELRNLTLEREVEQLKTHLRNLGGEDVAVSDPH--GVR-RPRPRPQHRIGERTLLHRTAAPSPLSEASASVSHRGGGGCGING----RSGS--DVSVRGQAEAGRARR 2073
            W+ LR N   S+S+L+  GG G +   VETI D + +    P    +       +  P+ A       G      + G   +EEE       G R+ +H  RG+ RS    +  TLP VKCWEGS    +GG  +GGG   ++R   R +RSRSHAD    QRT +  RN +       G+N+R+   ME  S+ +A  +  +  G  FGR +S+  R R  G           XXXXXXXXX+ PS    GD R PA    +TA S+  PP++ L V+S AED T   L               ++ LS+CSSLPPM G+         A   TDLIFEESS EDS ASVSQASS ER G +  G G     EXXXXXXXXXX XXXX          R+RS  SS+ FVRT                                       RP +GE+FRVQELSD D+DG E+ L  +SPP  ++  A   A  A +N+GHQRA+LELRNL LEREVEQLKT+LR++GG+DV  +D H  G+R RPRP  Q R+GE+ LLH +            V++R GGG G NG    RSGS  DV+ RG+A  GRARR
Sbjct:   78 WEGLRRNRLASASRLDI-GGDGDSVTFVETIADIVDNDDGLPEDSEQQCRGELERPSPAVADSSFEPVGNRGKKTAGGAATKEEEQGSHSGTGSRECQHPPRGSRRSGGGNQRGTLPMVKCWEGSPFAKEGG--KGGGGEEERRSHGRPMRSRSHADKTFLQRTSSGARNPSSFVVAIDGKNTRNNNRMEAGSAGVAATMTESGGGAAFGRASSEGLRVRQPGGRRAGMRAVRGXXXXXXXXXTLPSSTADGD-RIPARGGASTASSTSPPPQLQLPVAS-AEDTTCFGLAESRSVSSANSAGVVQEQLSVCSSLPPMGGTGNGTGAGGVAAAATDLIFEESSFEDSVASVSQASSAERCGVEALGSGSDANGEXXXXXXXXXXIXXXXGKRXXXXPAPRKRSRSSSDEFVRT---------------------------------------RPGAGEVFRVQELSDCDEDGLESVLATSSPPAVTTAAA---ATVAAVNMGHQRASLELRNLALEREVEQLKTYLRSMGGDDVINTDRHLHGLRPRPRPHQQQRVGEQVLLHHSTXXXXXXXXXXXVTYRSGGGSGRNGGSSWRSGSGGDVTARGKANVGRARR 645
[Close]
BLAST of mRNA_L-elsbetiae_contig2016.6066.1 vs. uniprot
Match: A0A7S1UF15_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UF15_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.320e-30
Identity = 77/176 (43.75%), Postives = 110/176 (62.50%), Query Frame = 1 
Query: 3283 DSPRYGRWPATL--DAQWAEVEFMLCHEVDCEESLQYTIEATEAGLVFMDKLEEKAQELGILKGQLSRWLLPFNTDTSVDEQQAATPRRFQESLLASSATSGTAGSGSGGTLTEEEAEYLTAGARRVRQLVRLKIADDNDLNTAKEALVTMAGFFVSISEEAAKRGGSATPFGILQ 3804
            ++PR  + P ++  + +WAEVEFML   +  +  L +T+ A EAGL+F ++LE KA  +G+L+GQLSRWLLP++ +TSV EQ  A      E+LL+       A        + +EA+YL  GA  VR+LVR+KIADDNDL TAK AL T A F   +S +A ++    TP+ +LQ
Sbjct:   30 ENPRTLKRPLSVKTERRWAEVEFMLRKPIASDADLSFTLAAAEAGLLFCEQLERKAHSMGVLRGQLSRWLLPYDANTSVSEQAGAHAHEVGEALLSD------APDFIKENFSVKEAQYLVKGADSVRRLVRIKIADDNDLETAKTALKTAAEFLRRLSSQAQEK--RMTPYALLQ 197
[Close]
BLAST of mRNA_L-elsbetiae_contig2016.6066.1 vs. uniprot
Match: A0A836C9L3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L3_9STRA)

HSP 1 Score: 125 bits (313), Expect = 5.640e-25
Identity = 82/207 (39.61%), Postives = 103/207 (49.76%), Query Frame = 1 
Query: 3304 WPATLDAQWAEVEFMLCHEVDCEESLQYTIEATEAGLVFMDKLEEKAQELGILKGQLSRWLLPFNTDTSVDEQQAATPRRFQESLLASSATSGTAGSGSGGTLTEEEAEYLTAGARRVRQLVRLKIADDNDLNTAKEALVTMAGFFVS----------------------------------------ISEEAAKRGGSATPFGILQ 3804
            W  TL +QWAEVEFML   V  +  L  T  A EAGL FMD L   A ELG+ KGQLSRWLLP++ +TSV +Q+A+TP   + ++                 L++ E   L  GA  VR LVR+KIADDNDL TA+ AL T A FF S                                        +++EA +RGG  TPF +LQ
Sbjct:  789 WDETLSSQWAEVEFMLRRAVQTDADLAATAAAAEAGLAFMDHLAATADELGVRKGQLSRWLLPYDLETSVADQRASTPGTAKVAMPHDITAR----------LSDREIARLVRGATGVRALVRVKIADDNDLVTARAALRTTAAFFRSSSCKSGEGKIGNDNDRMRANXXXXXXXXXXXXXXXXXCRHVTDEALRRGGGCTPFDVLQ 985
[Close]
BLAST of mRNA_L-elsbetiae_contig2016.6066.1 vs. uniprot
Match: A0A7S2RCS9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCS9_9STRA)

HSP 1 Score: 119 bits (299), Expect = 4.740e-24
Identity = 67/168 (39.88%), Postives = 103/168 (61.31%), Query Frame = 1 
Query: 3304 WPATLDAQWAEVEFMLCHEVDCEESLQYTIEATEAGLVFMDKLEEKAQELGILKGQLSRWLLPF-NTDTSVDEQQAATPRRFQESLLASSATSGTAGSGSGGTLTEEEAEYLTAGARRVRQLVRLKIADDNDLNTAKEALVTMAGFFVSISEEAAKRGGSATPFGILQ 3804
            W  +++ +  EVEFML   V+ +  +QYT+ A EAGL+FM+++E KA++LG+L G LSRW+LP+ N+D SV +Q++      Q   L                +T++E  YL  GA  VR+L+R+KIAD+NDLN A+++L  +A FF  + +EA  R     P+ +LQ
Sbjct:  275 WSRSMEVRNTEVEFMLRKPVENDNDIQYTLAAAEAGLIFMEQMEHKARQLGVLSGVLSRWVLPYGNSDQSVADQRSQAKEALQNIPLEYRQR-----------MTDKEVSYLVQGANSVRKLIRIKIADENDLNQARDSLRIVARFFRRVVKEA--REAELPPYTLLQ 429
[Close]
BLAST of mRNA_L-elsbetiae_contig2016.6066.1 vs. uniprot
Match: A0A7S2CYY0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CYY0_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.750e-23
Identity = 65/157 (41.40%), Postives = 95/157 (60.51%), Query Frame = 1 
Query: 3334 EVEFMLCHEVDCEESLQYTIEATEAGLVFMDKLEEKAQELGILKGQLSRWLLPFNTDTSVDEQQAATPRRFQESLLASSATSGTAGSGSGGTLTEEEAEYLTAGARRVRQLVRLKIADDNDLNTAKEALVTMAGFFVSISEEAAKRGGSATPFGILQ 3804
            EVEFML   V  ++ +QYT+ A EAGL+FM+++E KAQ LG+L+G LSR +LP+ T       Q++  +   E++                 ++++E  YL  GA  VR+L+R+KIADDNDLN A+E+L T A FF  ++ EA +   S  PF +LQ
Sbjct:    3 EVEFMLRDPVKNDQDIQYTLAAAEAGLLFMEQIEAKAQALGVLRGTLSRHILPYGTTDQSVANQSSKAKEVLENMPDEMRRR----------MSDKEVAYLVRGANSVRKLIRVKIADDNDLNQAQESLKTTARFFRRVTAEAEEM--SIGPFRLLQ 147
[Close]
BLAST of mRNA_L-elsbetiae_contig2016.6066.1 vs. uniprot
Match: A0A812RVF9_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RVF9_SYMMI)

HSP 1 Score: 111 bits (277), Expect = 2.970e-21
Identity = 66/184 (35.87%), Postives = 102/184 (55.43%), Query Frame = 1 
Query: 3304 WPATLDAQWAEVEFMLCHEVDCEESLQYTIEATEAGLVFMDK-----------------LEEKAQELGILKGQLSRWLLPFNTDTSVDEQQAATPRRFQESLLASSATSGTAGSGSGGTLTEEEAEYLTAGARRVRQLVRLKIADDNDLNTAKEALVTMAGFFVSISEEAAKRGGSATPFGILQ 3804
            W  T+D +  EVE +L   ++ +E +Q+T+ A EAGL+FMD+                 L+  A+ L +L+G LSRWLLP++ +T++ +Q ++       S++AS            G LTE +  YL +G   VRQL+R+KIADDNDL  A+EAL T   F   +  +A+   G  TP+ +L+
Sbjct:  461 WSKTMDMRKGEVELLLRRPINSDEDIQFTLAAAEAGLIFMDEVGLFQNGGLKSDACCLQLDRVAKSLHMLRGSLSRWLLPYDNNTAITDQISSV-----HSVVASMPDY------LRGRLTERQVNYLVSGVNGVRQLIRVKIADDNDLEQAREALQTAVDFLKRLQTDASSASGGMTPYQLLR 633
[Close]
BLAST of mRNA_L-elsbetiae_contig2016.6066.1 vs. uniprot
Match: A0A7S3YKY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YKY7_HETAK)

HSP 1 Score: 83.2 bits (204), Expect = 5.860e-15
Identity = 43/89 (48.31%), Postives = 60/89 (67.42%), Query Frame = 1 
Query: 3277 PNDSPR-YGRWPATLDAQWAEVEFMLCHEVDCEESLQYTIEATEAGLVFMDKLEEKAQELGILKGQLSRWLLPFNTDTSVDEQQAATPR 3540
            PN  P  + R+  TL  +WAEVEF L   +  +  + Y + A EAG +F+D+LE+KA ELG+LKGQLSR +LPF+ +TSV +Q A+  R
Sbjct:   23 PNPVPATHSRFSQTLQVRWAEVEFTLRRPIASDADVHYVMAAVEAGHLFLDQLEDKAAELGVLKGQLSRVILPFDHNTSVADQAASVSR 111
[Close]
BLAST of mRNA_L-elsbetiae_contig2016.6066.1 vs. uniprot
Match: A0A7S1XYC9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYC9_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 6.720e-15
Identity = 40/85 (47.06%), Postives = 60/85 (70.59%), Query Frame = 1 
Query: 3283 DSPRYGRWPATL--DAQWAEVEFMLCHEVDCEESLQYTIEATEAGLVFMDKLEEKAQELGILKGQLSRWLLPFNTDTSVDEQQAA 3531
            ++PR  + P ++  + +WAEVEFML   +  +  L +T+ A EAGL+F ++LE KA  +G+L+GQLSRWLLP++ +TSV EQ  A
Sbjct:   30 ENPRTLKRPLSVKTERRWAEVEFMLRKPIASDADLSFTLAAAEAGLLFCEQLERKAHSMGVLRGQLSRWLLPYDANTSVSEQAGA 114
[Close]
BLAST of mRNA_L-elsbetiae_contig2016.6066.1 vs. uniprot
Match: A0A7S1G8N4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G8N4_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 7.890e-13
Identity = 55/162 (33.95%), Postives = 80/162 (49.38%), Query Frame = 1 
Query: 3316 LDAQWAEVEFMLCHEVDCEESLQYTIEATEAGLVFMDKLEEKAQELGILKGQLSRWLLPFNTDTSVDEQQAATPRRFQESLLASSATSGTAGSGSGGTLTEEEAEYLTAGARRVRQLVRLKIADDNDLNTAKEALVTMAGFFVSISEEAAKRGGSATPFGIL 3801
            L   W EVEF+L   V     +  T+ A   G+ F+D+L+E A  LG ++G LSRWLLP++ +TS  +Q              +    G  G      L   E E +   A  +R LVR+KIADD DL  A+ A   +  FF +++  A + G +  PF +L
Sbjct:  150 LGQHWGEVEFLLRKPVTSAADVAATLAAATDGVAFLDRLQETATRLGTMQGTLSRWLLPYDDNTSTMDQAN---HSHSAXXXXARERGGPGGVDFASLLDAAEVEDMVRAATSLRSLVRVKIADDADLAQARIAAGEVLRFFTALTAHAEEVGEA--PFAVL 306
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2016.6066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FQL4_ECTSI7.890e-12544.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5X6_9PHAE8.040e-6140.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1UF15_9STRA3.320e-3043.75Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A836C9L3_9STRA5.640e-2539.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2RCS9_9STRA4.740e-2439.88Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2CYY0_9STRA1.750e-2341.40Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A812RVF9_SYMMI2.970e-2135.87Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A7S3YKY7_HETAK5.860e-1548.31Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1XYC9_9STRA6.720e-1547.06Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1G8N4_9STRA7.890e-1333.95Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2016contigL-elsbetiae_contig2016:14422..21145 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-01_009170.1
Exons10
Model size3813
Cds size3813
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2016.6066.1prot_L-elsbetiae_contig2016.6066.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2016 14422..21145 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815834.0782685-CDS-L-elsbetiae_contig2016:14421..150961622815834.0782685-CDS-L-elsbetiae_contig2016:14421..15096Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 14422..15096 +
1691683133.736987-CDS-L-elsbetiae_contig2016:14421..150961691683133.736987-CDS-L-elsbetiae_contig2016:14421..15096Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 14422..15096 +
1622815834.0889554-CDS-L-elsbetiae_contig2016:15183..160101622815834.0889554-CDS-L-elsbetiae_contig2016:15183..16010Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 15184..16010 +
1691683133.7480257-CDS-L-elsbetiae_contig2016:15183..160101691683133.7480257-CDS-L-elsbetiae_contig2016:15183..16010Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 15184..16010 +
1622815834.1018274-CDS-L-elsbetiae_contig2016:16396..165101622815834.1018274-CDS-L-elsbetiae_contig2016:16396..16510Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 16397..16510 +
1691683133.7605684-CDS-L-elsbetiae_contig2016:16396..165101691683133.7605684-CDS-L-elsbetiae_contig2016:16396..16510Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 16397..16510 +
1622815834.114395-CDS-L-elsbetiae_contig2016:16730..169231622815834.114395-CDS-L-elsbetiae_contig2016:16730..16923Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 16731..16923 +
1691683133.7684371-CDS-L-elsbetiae_contig2016:16730..169231691683133.7684371-CDS-L-elsbetiae_contig2016:16730..16923Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 16731..16923 +
1622815834.126074-CDS-L-elsbetiae_contig2016:17434..178071622815834.126074-CDS-L-elsbetiae_contig2016:17434..17807Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 17435..17807 +
1691683133.7763658-CDS-L-elsbetiae_contig2016:17434..178071691683133.7763658-CDS-L-elsbetiae_contig2016:17434..17807Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 17435..17807 +
1622815834.1378763-CDS-L-elsbetiae_contig2016:17861..182091622815834.1378763-CDS-L-elsbetiae_contig2016:17861..18209Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 17862..18209 +
1691683133.7908254-CDS-L-elsbetiae_contig2016:17861..182091691683133.7908254-CDS-L-elsbetiae_contig2016:17861..18209Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 17862..18209 +
1622815834.1471045-CDS-L-elsbetiae_contig2016:18489..186371622815834.1471045-CDS-L-elsbetiae_contig2016:18489..18637Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 18490..18637 +
1691683133.804689-CDS-L-elsbetiae_contig2016:18489..186371691683133.804689-CDS-L-elsbetiae_contig2016:18489..18637Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 18490..18637 +
1622815834.1569417-CDS-L-elsbetiae_contig2016:18999..197681622815834.1569417-CDS-L-elsbetiae_contig2016:18999..19768Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 19000..19768 +
1691683133.8150117-CDS-L-elsbetiae_contig2016:18999..197681691683133.8150117-CDS-L-elsbetiae_contig2016:18999..19768Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 19000..19768 +
1622815834.1675737-CDS-L-elsbetiae_contig2016:20496..207151622815834.1675737-CDS-L-elsbetiae_contig2016:20496..20715Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 20497..20715 +
1691683133.8254323-CDS-L-elsbetiae_contig2016:20496..207151691683133.8254323-CDS-L-elsbetiae_contig2016:20496..20715Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 20497..20715 +
1622815834.178151-CDS-L-elsbetiae_contig2016:20998..211451622815834.178151-CDS-L-elsbetiae_contig2016:20998..21145Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 20999..21145 +
1691683133.8352692-CDS-L-elsbetiae_contig2016:20998..211451691683133.8352692-CDS-L-elsbetiae_contig2016:20998..21145Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2016 20999..21145 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2016.6066.1

>prot_L-elsbetiae_contig2016.6066.1 ID=prot_L-elsbetiae_contig2016.6066.1|Name=mRNA_L-elsbetiae_contig2016.6066.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1271bp
DDNNSIGPTAYTSKDNLVAPSSNPCPPAAPPAPRANNNNNNNSNNPPVRV
VFSASLERSLQSSGKRRPSALRSSSSWTAGHLTRDSKKNTVAQITPTTST
RTTQLTKKRLGVPTHPTAVSAGRRQDGGITKRAESPRRWKHLRGNHRVSS
SKLERRGGSGATTAVVETIIDTIRSSPARPRHGRRNLHDPSSKVRPSAAA
AAAVVVGASRGLVRREEEDQVEKPWGGRKEHSSRGAPRSEERTLPTVKCW
EGSAITADGGGSEGGGETRKQRPRQRTVRSRSHADTASPQRTENAGRNST
GITGGRNSRDIMEEDSSRIALVGRNREGVGFGREASDSSRFRLQGRGGAG
ARAAAHSNGTGGGSGSFPSEMLPGDERKPASRAVATALSSPPRVLLSVSS
TAEDATFCDLEDNLSICSSLPPMTGSATITTDLIFEESSLEDSGASVSQA
SSTERNGNDNGGGGGCGKSEGGGGGRGKRGGGGGVSRQRSGVSSEAFVRT
RSMGRGLSNLMARIHEQEECKGGLLESQRDPLPRGIGLSRPSSGEMFRVQ
ELSDSDQDGHEAGLTSPPLSSSPTAGLGAASAVMNVGHQRAALELRNLTL
EREVEQLKTHLRNLGGEDVAVSDPHGVRRPRPRPQHRIGERTLLHRTAAP
SPLSEASASVSHRGGGGCGINGRSGSDVSVRGQAEAGRARRGDPTSANPS
RKSPAGSSGGGGGGGGSRSGGSGSGGGAAIGSSSMFGVQRVQPAPSPPKK
RASRRTSAATTPAVESSSVSTSSSSPARQLRTNRLRSPTSASAAASTVEV
LTPQVGRGSETARSRGIGDGGLDVVGRTSQMIHINKNEEDSSQDPLSGEA
EPRPLPRLRREEASLKAKPRASKTPINLGGMVSGIKHTLLNRRRSTGDKN
TQLVDPAGKLSAVRGSQAFGGDKTTSSNTAATPTTTNNNNNNNTTTNNTA
AVATATGKDFDQTENRRRGSRHPTRRRENHPPPAASSSKKSTSVTSTAAP
AVERQRGRDASGGFREIGRAAEGAEEEGSLKAAGTKHTAADVKATATTET
FDETVGEPRATGAVQMLAAVAMTMECGAAGGGTGGVKGADDAPNDSPRYG
RWPATLDAQWAEVEFMLCHEVDCEESLQYTIEATEAGLVFMDKLEEKAQE
LGILKGQLSRWLLPFNTDTSVDEQQAATPRRFQESLLASSATSGTAGSGS
GGTLTEEEAEYLTAGARRVRQLVRLKIADDNDLNTAKEALVTMAGFFVSI
SEEAAKRGGSATPFGILQAS*
back to top

mRNA from alignment at L-elsbetiae_contig2016:14422..21145+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2016.6066.1 ID=mRNA_L-elsbetiae_contig2016.6066.1|Name=mRNA_L-elsbetiae_contig2016.6066.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6724bp|location=Sequence derived from alignment at L-elsbetiae_contig2016:14422..21145+ (Laminarionema elsbetiae ELsaHSoW15)
GACGACAACAACAGCATCGGCCCTACAGCATACACCAGCAAGGATAATCT
TGTGGCACCGTCCAGCAACCCTTGTCCGCCAGCCGCGCCACCAGCACCCC
GTGCGAACAACAACAACAACAACAACAGTAACAACCCGCCAGTGCGAGTA
GTCTTTTCAGCCTCACTAGAGAGGTCCCTGCAATCCTCAGGCAAAAGGAG
GCCCTCAGCTCTACGTTCTTCGTCTTCCTGGACCGCGGGCCATCTCACCC
GTGACAGCAAGAAAAACACAGTTGCGCAAATAACGCCAACAACGTCAACG
AGAACCACGCAACTTACGAAGAAGAGGCTGGGCGTTCCTACCCATCCTAC
AGCCGTAAGTGCCGGCCGCCGTCAGGACGGGGGTATCACAAAGAGGGCGG
AGTCACCGCGCCGGTGGAAGCATTTGAGGGGTAACCACAGGGTATCATCT
TCGAAGTTAGAACGCCGCGGTGGAAGTGGTGCCACTACTGCTGTCGTCGA
GACTATCATTGATACTATCAGGAGCTCTCCCGCGAGGCCAAGGCATGGCC
GACGGAATCTGCATGATCCTTCGTCCAAAGTGCGGCCATCGGCGGCGGCT
GCGGCAGCGGTTGTTGTCGGCGCGTCTCGTGGGCTCGTCCGTAGAGAGGA
GGAGGACCAGGTGGAGAAACCGTGGGTAAACAACTCGGTAGCTGGCCAGA
CTCCGTCTCTTACAAAGCAGCAGCAGCAGCAGCAGCAACAGAACGAAAAA
GGTTATCGCAAGGGTGGGAGAAAAGAACACTCTTCTCGCGGTGCTCCAAG
AAGTGAAGAACGTACCCTGCCCACGGTAAAGTGCTGGGAAGGAAGCGCAA
TTACAGCCGACGGGGGGGGGAGCGAGGGCGGGGGCGAAACGAGAAAACAA
AGACCACGACAGAGAACCGTGAGGTCTCGCAGCCACGCGGATACGGCAAG
CCCACAGAGGACAGAAAACGCTGGGAGAAATTCGACTGGTATCACCGGCG
GTAGAAACTCCCGCGACATAATGGAGGAAGACAGCTCCAGAATCGCATTG
GTGGGCAGAAACCGGGAGGGGGTAGGCTTTGGACGGGAAGCAAGCGATTC
TTCACGATTTCGCCTTCAAGGACGAGGGGGAGCAGGCGCACGGGCGGCGG
CGCACAGCAACGGTACCGGGGGTGGAAGCGGTAGTTTTCCCTCCGAAATG
CTACCGGGCGACGAGCGAAAACCAGCGTCACGGGCGGTCGCGACAGCGCT
TTCGTCTCCTCCGCGGGTGCTGCTATCTGTCTCGTCAACAGCTGAAGATG
CGACATTCTGCGATCTCGAGGACAATTTGTCGATTTGCTCATCCTTACCG
CCGATGACAGGTTCTGCGACGATCACGACAGACTTGATATTTGAGGAGTC
CTCGCTCGAAGATAGCGGAGCTTCCGTGTCGCAGGCTTCATCGACAGAAA
GAAATGGGAACGACAACGGCGGCGGCGGCGGTTGCGGCAAAAGCGAGGGT
GGTGGAGGTGGTCGAGGAAAACGAGGGGGGGGGGGGGGCGTTTCTCGGCA
ACGCAGCGGTGTGTCTTCCGAGGCTTTTGTGCGGACCAGGTGCGAACGAG
GAAGGTGAGGGCCAGGCGTGAACGGCAGAGTCTCTCGAACACCACTCTCT
CCGTTTTCACAATAGGGTATGTCACTCGCGCTTCGCTGTGTGTTGCTTTG
TTATGCTTCTGTACAAGCACGGCGTTTAGCGTCTATCCCGAGGCTCGTCT
CTGTTGTTTCACCAGATATCTCCACTGAGGAATGTGTATTGGTGGCGTTG
CTGTCCTCAATGCGCTTCGTGGATCGACAAGAACATTGTTTGTAGGATAT
TGATGATACCTGCCTTTCGTCGATAAAAGTGAGGGCATTGGTCCAAACTG
AACCTGTCCGCGATTCTCACCTCGAAGCAGCTTGACACTATTCACCACGT
GACCGCTGCATGACGAGCTTCTCAGGTCCATGGGTCGTGGTTTGTCCAAC
CTCATGGCGCGGATTCACGAGCAAGAGGAGTGCAAGGGAGGATTGCTTGA
ATCGCAACGTGATCCCCTTCCACGAGGGATAGGCTTGAGGTGGGAAGACG
TCGCCGCTTGGCTGGGTAGTACTCGCACTATTTTCGAAGCTATCCTGCCG
TTTGAGGTGTGCATACGAGGCACAGACAAAAATATTTGGTTGCGAGGCAC
TCTACAATTGCGAACCTGGGGAGTTATCGGAAATCGGATTGGGGTTCACG
AAGAGACGTTCATGCAGGGTAATATGTTTTGACGCCATTGGGTCGTGGCT
CAACCACAGCAGGCCAAGCTCCGGGGAAATGTTTCGGGTGCAAGAGCTGT
CGGACTCCGACCAAGACGGGCACGAAGCAGGGCTAACGTCGCCACCGCTG
TCTTCATCGCCGACTGCTGGCCTCGGTGCGGCTTCGGCTGTGATGAACGT
AGGCCATCAGAGGGCCGCCTTGGAGCTACGAAACTTAACGCTAGAACGCG
AGGTGAGAGTGACACCTTTGTGGAGACAGCGTGTAGCCGCGAAGAAAATA
ATCCAACAAACGAACATCTAGGTGGCAACGACAGCACAGCTTTCGGATCG
ATTTACCGACGAACGACACACTTTTTGAAATGTCCACGCCGTTGACCAAC
GACAGCTTTTGCGGTTAACGTGGAGCTTCCTGGTAACTTTGTGAATCCCA
CTATCTCTAGTGAAGGCGTCCAGCGGCAGCACTAGCGGCAGCACTGCTGC
TTCTCATCATTGTCGCTGCTCTGCTTTTTACATGGCCTGTGAACCGGAAT
CCGTACACCAACATCCAGGTTTTGGGATAATGACTGCTTTGTTGCTGAGA
AAAGGGAACACATGTATGTACACAGCTAACGTTTGGTCGGAGCACGTATG
CGTGCTCACTCGTCTTGAAACACAAGAGATGAACGTGAAAATTCAATTTG
CAGTCAACAAACCTGTTTACAAAACTCATGTCTCCGTCGTGCCACAAAAA
CCGCCACGCAAAGGTGGAACAGCTCAAGACACACCTGCGAAATCTGGGAG
GCGAAGACGTCGCCGTCTCCGACCCCCACGGTGTACGCCGACCGAGACCT
CGACCCCAGCACCGTATCGGGGAGCGAACGCTGCTGCACCGTACGGCCGC
ACCCTCCCCCCTCTCCGAAGCCTCCGCCTCCGTCTCTCACCGGGGCGGTG
GCGGCTGCGGTATCAACGGTCGCAGCGGCAGCGATGTGAGCGTAAGAGGC
CAGGCCGAAGCCGGACGCGCGAGGAGAGGGGACCCGACCTCCGCAAACCC
GAGCAGGAAGTCTCCGGCTGGCAGCAGCGGCGGCGGCGGCGGCGGCGGCG
GTAGTAGAAGTGGTGGTAGTGGTAGTGGTGGTGGTGGTGCCGCGCTTACG
GTTCATCAAAGGACCGTGGACGAGGCCAAAGCTGCCAAAGCTGCTATCGG
TAGCAGTAGCATGTTTGGTGTGCAGAGAGTACAGCCCGCTCCCTCCCCTC
CGAAAAAGCGCGCCAGTCGTCGTACGTCGGCTGCAACGACGCCGGCAGTG
GAGTCTTCTTCAGTCTCTACTTCTTCGTCGTCTCCCGCAAGGCAGTTGCG
AACAAACAGGCTACGCTCGCCGACTTCTGCGTCTGCTGCGGCATCCACGG
TCGAGGTACTGACACCTCAAGTAGGGAGAGGGAGTGAGACCGCGCGTTCG
CGAGGCATCGGCGATGGTGGCCTTGACGTCGTGGGAAGAACAAGCCAGAT
GATCCACATCAACAAGAACGAAGAGGATTCATCTCAGGGTAAGAAGAAGC
TTCGTTCATTCCTTCAATATCGTTGTTATTTCTGATATCGACATGGTTGC
TGCCACCGGATCTAGCAAAGGGTACTTCTCTGCAAGGTGCGCAGCTGGCT
TGCGGCCACCGAAACAATGTCAGGATGACCAGAACGTCGGAGCAACCTCC
GTTGAGCCCCCACTGAATCCTCGGCGTTTCCAGTTGGTGTGTACTTCCCT
GAACTGTTGCTTTATCCTCTGACACCCGTCTTGGTTGTTTATAGAATTGG
GACAAGCTCTCGGGCAAGATCCACTTAGCGGTGAGGCCGAACCTCGGCCT
TTGCCACGGTTGCGAAGGGAGGAGGCATCGTTGAAGGCAAAGCCTCGAGC
TTCGAAAACGCCCATCAATCTTGGCGGTATGGTGTCGGGGATCAAGCACA
CGCTTCTCAATCGAAGGTGCGCGGTGCTTGTGTGAATCTCCGTTGAATGT
ATGTAGGTTTTCTTAGGTTCATGGCTAGGAGGGGGCAAACGCCGTGCTAG
AGTAGCGAGAAAGTACGCTCGTTTTCCGAATGTCCCATGTATGGACATAA
AACAAATCCTACCCACGTGTGTGTTTGTTTTTACACATCGTTTTCATCTT
GACATCGACCACCGTGAACGTCATTCTGCCCACCGTTTTCAAGGATTTAG
GTATGATATGTATGTAGCCGTTTACATGTCTGCATCTGTCTCCTCAAATT
ATGTATGTACCAACTGTCTCCTCGCGAACGATCTACGCTATGATCCTCCT
TTCCCTTTTTCCTCTACCCACCTCTCAGACGAAGCACGGGGGACAAAAAC
ACCCAGCTTGTCGACCCCGCCGGCAAGCTATCCGCTGTCCGTGGAAGCCA
AGCTTTCGGCGGAGACAAGACAACGTCCTCTAACACGGCCGCCACCCCCA
CCACCACCAACAACAACAACAACAACAACACCACCACCAACAACACCGCC
GCCGTCGCCACTGCCACAGGGAAAGACTTCGATCAAACCGAAAATAGAAG
ACGGGGTTCTCGCCATCCGACACGAAGAAGAGAAAACCACCCTCCCCCCG
CCGCGTCCTCATCGAAGAAATCGACCTCGGTAACTTCTACTGCAGCCCCC
GCAGTCGAGCGCCAGCGCGGCCGGGATGCTTCCGGGGGTTTCAGAGAAAT
CGGTCGAGCGGCGGAGGGGGCGGAAGAGGAGGGGTCTCTGAAGGCAGCAG
GCACAAAGCACACGGCCGCTGACGTCAAGGCTACAGCGACAACAGAGACC
TTCGACGAGACGGTGGGCGAACCAAGGGCAACAGGGGCTGTACAAATGTT
GGCAGCCGTTGCGATGACCATGGAGTGCGGCGCGGCTGGGGGGGGTACAG
GGGGGGTCAAAGGGGCCGACGATGCCCCGAACGATTCGCCGAGATACGGG
CGTTGGCCAGCGACGCTGGACGCGCAATGGGCGGAGGTAGAGTTCATGCT
GTGCCATGAGGTGGATTGCGAGGAGAGCTTGCAGTACACCATCGAGGCCA
CGGAAGCGGGACTGGTCTTTATGGATAAGCTGGAAGAGAAGGCACAGGTA
GGTGTGATTCTTCCTTTGTGTAAGCTATTGCATAAATCGTTTGTAACGGA
CAGGGTCTGGACTACAACAGACACGCTGTTCTACTGCACCTATCGGAGGA
CAACGTTATTCTTGTATGACCAGACAAACTGTTGAGGCCACGCCCAACTG
ATGTGGGACCAGCTGCTCCAGCCGGCCTCTGATGTTTGCATTGCACAACA
TCCGCCTCTCCAGCTTCCCGAAACAAGTAAATGCGTTTCAGAGAATAGTC
CACCCCGACAGTGTACCCGTCGGGATCGAGAGAGAGGCGTGAGTTCAAAA
GGTGGTTGACTTCATTTTCCTCACCCCCCCCCCCCTCCGTTTCATCCTCC
GTGTCAAGGGGTGCCGTATCGCGTGGTACGTGCAGTCAGGCACCCACGAA
GCAGTTACTACCCAATTCCCAAGGAAGATGCCAGCAGGCAGCAATCAAAT
AATATGAGGCTCTCATTCGCACAAGACGCTAATAATAATCACAAATTTTG
AAGTCTGCCTCGCAAGCGGTTGATTCTCGGGGTGCAGCTCAACCCTCGTG
TGACTCGCGAAGCACCTCATGGCGATTCTCGTTTGGTTTGGTGCCGACCT
GTTTGGTCCACGAAAATCCGACAGTCCAGGCGTGCTCCAGCTTTGGAGAT
TGTATGTAGTCTGATGGCTACAGCGAACCTAACGACTCTTCTCTCCTCTT
CTCTCCCGTCCTCCAAACATACCAGGAGCTGGGCATTCTCAAGGGCCAGT
TGAGCCGCTGGCTGCTTCCTTTCAATACTGACACCTCTGTGGACGAGCAG
CAGGCGGCAACCCCGCGGCGGTTCCAGGAATCCTTGCTGGCGTCGTCAGC
AACCTCCGGCACGGCGGGCAGTGGTAGCGGCGGCACTCTGACGGAGGAGG
AGGCGGAGTACCTCACTGCCGGCGCTCGGAGGGTTCGACAGTTGGTGAGG
GAGAAGTGCCGTCCGTCAAGGCGTCATATATATGGCCATGGGGTCACTGG
TGGCTTTATTATTACGTCCATGTGGGCCCACATTCAGTCGGTGTGCACAG
TCTCCTCCAGCCCCCCCCCCGCCGCGTAGCGCGCGCGTGCGTCAATTTAG
GAACGGCTGCTGACAATGATGGATTTTGAGTACATACAACAAATTCCAGC
CCATATATCTCCGGCTCCCTTGGGTACCCCTTCTCCTTCAACATAAATAA
ACAATCTTCGAATATCATGCCACGCAGGTGAGATTGAAGATCGCTGACGA
CAACGATCTCAACACCGCCAAGGAAGCCCTCGTTACCATGGCTGGATTTT
TTGTGAGCATTTCCGAGGAGGCGGCGAAAAGGGGCGGCAGTGCCACACCC
TTCGGCATCCTCCAGGCAAGTTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig2016:14422..21145+

>mRNA_L-elsbetiae_contig2016.6066.1 ID=mRNA_L-elsbetiae_contig2016.6066.1|Name=mRNA_L-elsbetiae_contig2016.6066.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=7626bp|location=Sequence derived from alignment at L-elsbetiae_contig2016:14422..21145+ (Laminarionema elsbetiae ELsaHSoW15)
GACGACAACAACAGCATCGGCCCTACAGCATACACCAGCAAGGATAATCT
TGTGGCACCGTCCAGCAACCCTTGTCCGCCAGCCGCGCCACCAGCACCCC
GTGCGAACAACAACAACAACAACAACAGTAACAACCCGCCAGTGCGAGTA
GTCTTTTCAGCCTCACTAGAGAGGTCCCTGCAATCCTCAGGCAAAAGGAG
GCCCTCAGCTCTACGTTCTTCGTCTTCCTGGACCGCGGGCCATCTCACCC
GTGACAGCAAGAAAAACACAGTTGCGCAAATAACGCCAACAACGTCAACG
AGAACCACGCAACTTACGAAGAAGAGGCTGGGCGTTCCTACCCATCCTAC
AGCCGTAAGTGCCGGCCGCCGTCAGGACGGGGGTATCACAAAGAGGGCGG
AGTCACCGCGCCGGTGGAAGCATTTGAGGGGTAACCACAGGGTATCATCT
TCGAAGTTAGAACGCCGCGGTGGAAGTGGTGCCACTACTGCTGTCGTCGA
GACTATCATTGATACTATCAGGAGCTCTCCCGCGAGGCCAAGGCATGGCC
GACGGAATCTGCATGATCCTTCGTCCAAAGTGCGGCCATCGGCGGCGGCT
GCGGCAGCGGTTGTTGTCGGCGCGTCTCGTGGGCTCGTCCGTAGAGAGGA
GGAGGACCAGGTGGAGAAACCGTGGGACGACAACAACAGCATCGGCCCTA
CAGCATACACCAGCAAGGATAATCTTGTGGCACCGTCCAGCAACCCTTGT
CCGCCAGCCGCGCCACCAGCACCCCGTGCGAACAACAACAACAACAACAA
CAGTAACAACCCGCCAGTGCGAGTAGTCTTTTCAGCCTCACTAGAGAGGT
CCCTGCAATCCTCAGGCAAAAGGAGGCCCTCAGCTCTACGTTCTTCGTCT
TCCTGGACCGCGGGCCATCTCACCCGTGACAGCAAGAAAAACACAGTTGC
GCAAATAACGCCAACAACGTCAACGAGAACCACGCAACTTACGAAGAAGA
GGCTGGGCGTTCCTACCCATCCTACAGCCGTAAGTGCCGGCCGCCGTCAG
GACGGGGGTATCACAAAGAGGGCGGAGTCACCGCGCCGGTGGAAGCATTT
GAGGGGTAACCACAGGGTATCATCTTCGAAGTTAGAACGCCGCGGTGGAA
GTGGTGCCACTACTGCTGTCGTCGAGACTATCATTGATACTATCAGGAGC
TCTCCCGCGAGGCCAAGGCATGGCCGACGGAATCTGCATGATCCTTCGTC
CAAAGTGCGGCCATCGGCGGCGGCTGCGGCAGCGGTTGTTGTCGGCGCGT
CTCGTGGGCTCGTCCGTAGAGAGGAGGAGGACCAGGTGGAGAAACCGTGG
GGTGGGAGAAAAGAACACTCTTCTCGCGGTGCTCCAAGAAGTGAAGAACG
TACCCTGCCCACGGTAAAGTGCTGGGAAGGAAGCGCAATTACAGCCGACG
GGGGGGGGAGCGAGGGCGGGGGCGAAACGAGAAAACAAAGACCACGACAG
AGAACCGTGAGGTCTCGCAGCCACGCGGATACGGCAAGCCCACAGAGGAC
AGAAAACGCTGGGAGAAATTCGACTGGTATCACCGGCGGTAGAAACTCCC
GCGACATAATGGAGGAAGACAGCTCCAGAATCGCATTGGTGGGCAGAAAC
CGGGAGGGGGTAGGCTTTGGACGGGAAGCAAGCGATTCTTCACGATTTCG
CCTTCAAGGACGAGGGGGAGCAGGCGCACGGGCGGCGGCGCACAGCAACG
GTACCGGGGGTGGAAGCGGTAGTTTTCCCTCCGAAATGCTACCGGGCGAC
GAGCGAAAACCAGCGTCACGGGCGGTCGCGACAGCGCTTTCGTCTCCTCC
GCGGGTGCTGCTATCTGTCTCGTCAACAGCTGAAGATGCGACATTCTGCG
ATCTCGAGGACAATTTGTCGATTTGCTCATCCTTACCGCCGATGACAGGT
TCTGCGACGATCACGACAGACTTGATATTTGAGGAGTCCTCGCTCGAAGA
TAGCGGAGCTTCCGTGTCGCAGGCTTCATCGACAGAAAGAAATGGGAACG
ACAACGGCGGCGGCGGCGGTTGCGGCAAAAGCGAGGGTGGTGGAGGTGGT
CGAGGAAAACGAGGGGGGGGGGGGGGCGTTTCTCGGCAACGCAGCGGTGT
GTCTTCCGAGGCTTTTGTGCGGACCAGGGTGGGAGAAAAGAACACTCTTC
TCGCGGTGCTCCAAGAAGTGAAGAACGTACCCTGCCCACGGTAAAGTGCT
GGGAAGGAAGCGCAATTACAGCCGACGGGGGGGGGAGCGAGGGCGGGGGC
GAAACGAGAAAACAAAGACCACGACAGAGAACCGTGAGGTCTCGCAGCCA
CGCGGATACGGCAAGCCCACAGAGGACAGAAAACGCTGGGAGAAATTCGA
CTGGTATCACCGGCGGTAGAAACTCCCGCGACATAATGGAGGAAGACAGC
TCCAGAATCGCATTGGTGGGCAGAAACCGGGAGGGGGTAGGCTTTGGACG
GGAAGCAAGCGATTCTTCACGATTTCGCCTTCAAGGACGAGGGGGAGCAG
GCGCACGGGCGGCGGCGCACAGCAACGGTACCGGGGGTGGAAGCGGTAGT
TTTCCCTCCGAAATGCTACCGGGCGACGAGCGAAAACCAGCGTCACGGGC
GGTCGCGACAGCGCTTTCGTCTCCTCCGCGGGTGCTGCTATCTGTCTCGT
CAACAGCTGAAGATGCGACATTCTGCGATCTCGAGGACAATTTGTCGATT
TGCTCATCCTTACCGCCGATGACAGGTTCTGCGACGATCACGACAGACTT
GATATTTGAGGAGTCCTCGCTCGAAGATAGCGGAGCTTCCGTGTCGCAGG
CTTCATCGACAGAAAGAAATGGGAACGACAACGGCGGCGGCGGCGGTTGC
GGCAAAAGCGAGGGTGGTGGAGGTGGTCGAGGAAAACGAGGGGGGGGGGG
GGGCGTTTCTCGGCAACGCAGCGGTGTGTCTTCCGAGGCTTTTGTGCGGA
CCAGGTCCATGGGTCGTGGTTTGTCCAACCTCATGGCGCGGATTCACGAG
CAAGAGGAGTGCAAGGGAGGATTGCTTGAATCGCAACGTGATCCCCTTCC
ACGAGGGATAGGCTTGAGGTCCATGGGTCGTGGTTTGTCCAACCTCATGG
CGCGGATTCACGAGCAAGAGGAGTGCAAGGGAGGATTGCTTGAATCGCAA
CGTGATCCCCTTCCACGAGGGATAGGCTTGAGCAGGCCAAGCTCCGGGGA
AATGTTTCGGGTGCAAGAGCTGTCGGACTCCGACCAAGACGGGCACGAAG
CAGGGCTAACGTCGCCACCGCTGTCTTCATCGCCGACTGCTGGCCTCGGT
GCGGCTTCGGCTGTGATGAACGTAGGCCATCAGAGGGCCGCCTTGGAGCT
ACGAAACTTAACGCTAGAACGCGAGCAGGCCAAGCTCCGGGGAAATGTTT
CGGGTGCAAGAGCTGTCGGACTCCGACCAAGACGGGCACGAAGCAGGGCT
AACGTCGCCACCGCTGTCTTCATCGCCGACTGCTGGCCTCGGTGCGGCTT
CGGCTGTGATGAACGTAGGCCATCAGAGGGCCGCCTTGGAGCTACGAAAC
TTAACGCTAGAACGCGAGGTGGAACAGCTCAAGACACACCTGCGAAATCT
GGGAGGCGAAGACGTCGCCGTCTCCGACCCCCACGGTGTACGCCGACCGA
GACCTCGACCCCAGCACCGTATCGGGGAGCGAACGCTGCTGCACCGTACG
GCCGCACCCTCCCCCCTCTCCGAAGCCTCCGCCTCCGTCTCTCACCGGGG
CGGTGGCGGCTGCGGTATCAACGGTCGCAGCGGCAGCGATGTGAGCGTAA
GAGGCCAGGCCGAAGCCGGACGCGCGAGGAGAGGGGACCCGACCTCCGCA
AACCCGAGCAGGAAGTCTCCGGCTGGCAGCAGCGGCGGCGGCGGCGGCGG
CGGCGGTAGTAGAAGTGGTGGTAGTGGTAGTGGTGGTGGTGGTGGAACAG
CTCAAGACACACCTGCGAAATCTGGGAGGCGAAGACGTCGCCGTCTCCGA
CCCCCACGGTGTACGCCGACCGAGACCTCGACCCCAGCACCGTATCGGGG
AGCGAACGCTGCTGCACCGTACGGCCGCACCCTCCCCCCTCTCCGAAGCC
TCCGCCTCCGTCTCTCACCGGGGCGGTGGCGGCTGCGGTATCAACGGTCG
CAGCGGCAGCGATGTGAGCGTAAGAGGCCAGGCCGAAGCCGGACGCGCGA
GGAGAGGGGACCCGACCTCCGCAAACCCGAGCAGGAAGTCTCCGGCTGGC
AGCAGCGGCGGCGGCGGCGGCGGCGGCGGTAGTAGAAGTGGTGGTAGTGG
TAGTGGTGGTGGTGCTGCTATCGGTAGCAGTAGCATGTTTGGTGTGCAGA
GAGTACAGCCCGCTCCCTCCCCTCCGAAAAAGCGCGCCAGTCGTCGTACG
TCGGCTGCAACGACGCCGGCAGTGGAGTCTTCTTCAGTCTCTACTTCTTC
GTCGTCTCCCGCAAGGCAGTTGCGAACAAACAGGCTACGCTCGCCGACTT
CTGCGTCTGCTGCGGCATCCACGGTCGAGGTACTGACACCTCAAGTAGGG
AGAGGGAGTGAGACCGCGCGTTCGCGAGGCATCGGCGATGGTGGCCTTGA
CGTCGTGGGAAGAACAAGCCAGATGATCCACATCAACAAGAACGAAGAGG
ATTCATCTCAGGCTGCTATCGGTAGCAGTAGCATGTTTGGTGTGCAGAGA
GTACAGCCCGCTCCCTCCCCTCCGAAAAAGCGCGCCAGTCGTCGTACGTC
GGCTGCAACGACGCCGGCAGTGGAGTCTTCTTCAGTCTCTACTTCTTCGT
CGTCTCCCGCAAGGCAGTTGCGAACAAACAGGCTACGCTCGCCGACTTCT
GCGTCTGCTGCGGCATCCACGGTCGAGGTACTGACACCTCAAGTAGGGAG
AGGGAGTGAGACCGCGCGTTCGCGAGGCATCGGCGATGGTGGCCTTGACG
TCGTGGGAAGAACAAGCCAGATGATCCACATCAACAAGAACGAAGAGGAT
TCATCTCAGGATCCACTTAGCGGTGAGGCCGAACCTCGGCCTTTGCCACG
GTTGCGAAGGGAGGAGGCATCGTTGAAGGCAAAGCCTCGAGCTTCGAAAA
CGCCCATCAATCTTGGCGGTATGGTGTCGGGGATCAAGCACACGCTTCTC
AATCGAAGATCCACTTAGCGGTGAGGCCGAACCTCGGCCTTTGCCACGGT
TGCGAAGGGAGGAGGCATCGTTGAAGGCAAAGCCTCGAGCTTCGAAAACG
CCCATCAATCTTGGCGGTATGGTGTCGGGGATCAAGCACACGCTTCTCAA
TCGAAGACGAAGCACGGGGGACAAAAACACCCAGCTTGTCGACCCCGCCG
GCAAGCTATCCGCTGTCCGTGGAAGCCAAGCTTTCGGCGGAGACAAGACA
ACGTCCTCTAACACGGCCGCCACCCCCACCACCACCAACAACAACAACAA
CAACAACACCACCACCAACAACACCGCCGCCGTCGCCACTGCCACAGGGA
AAGACTTCGATCAAACCGAAAATAGAAGACGGGGTTCTCGCCATCCGACA
CGAAGAAGAGAAAACCACCCTCCCCCCGCCGCGTCCTCATCGAAGAAATC
GACCTCGGTAACTTCTACTGCAGCCCCCGCAGTCGAGCGCCAGCGCGGCC
GGGATGCTTCCGGGGGTTTCAGAGAAATCGGTCGAGCGGCGGAGGGGGCG
GAAGAGGAGGGGTCTCTGAAGGCAGCAGGCACAAAGCACACGGCCGCTGA
CGTCAAGGCTACAGCGACAACAGAGACCTTCGACGAGACGGTGGGCGAAC
CAAGGGCAACAGGGGCTGTACAAATGTTGGCAGCCGTTGCGATGACCATG
GAGTGCGGCGCGGCTGGGGGGGGTACAGGGGGGGTCAAAGGGGCCGACGA
TGCCCCGAACGATTCGCCGAGATACGGGCGTTGGCCAGCGACGCTGGACG
CGCAATGGGCGGAGGTAGAGTTCATGCTGTGCCATGAGGTGGATTGCGAG
GAGAGCTTGCAGTACACCATCGAGGCCACGGAAGCGGGACTGGTCTTTAT
GGATAAGCTGGAAGAGAAGGCACAGACGAAGCACGGGGGACAAAAACACC
CAGCTTGTCGACCCCGCCGGCAAGCTATCCGCTGTCCGTGGAAGCCAAGC
TTTCGGCGGAGACAAGACAACGTCCTCTAACACGGCCGCCACCCCCACCA
CCACCAACAACAACAACAACAACAACACCACCACCAACAACACCGCCGCC
GTCGCCACTGCCACAGGGAAAGACTTCGATCAAACCGAAAATAGAAGACG
GGGTTCTCGCCATCCGACACGAAGAAGAGAAAACCACCCTCCCCCCGCCG
CGTCCTCATCGAAGAAATCGACCTCGGTAACTTCTACTGCAGCCCCCGCA
GTCGAGCGCCAGCGCGGCCGGGATGCTTCCGGGGGTTTCAGAGAAATCGG
TCGAGCGGCGGAGGGGGCGGAAGAGGAGGGGTCTCTGAAGGCAGCAGGCA
CAAAGCACACGGCCGCTGACGTCAAGGCTACAGCGACAACAGAGACCTTC
GACGAGACGGTGGGCGAACCAAGGGCAACAGGGGCTGTACAAATGTTGGC
AGCCGTTGCGATGACCATGGAGTGCGGCGCGGCTGGGGGGGGTACAGGGG
GGGTCAAAGGGGCCGACGATGCCCCGAACGATTCGCCGAGATACGGGCGT
TGGCCAGCGACGCTGGACGCGCAATGGGCGGAGGTAGAGTTCATGCTGTG
CCATGAGGTGGATTGCGAGGAGAGCTTGCAGTACACCATCGAGGCCACGG
AAGCGGGACTGGTCTTTATGGATAAGCTGGAAGAGAAGGCACAGGAGCTG
GGCATTCTCAAGGGCCAGTTGAGCCGCTGGCTGCTTCCTTTCAATACTGA
CACCTCTGTGGACGAGCAGCAGGCGGCAACCCCGCGGCGGTTCCAGGAAT
CCTTGCTGGCGTCGTCAGCAACCTCCGGCACGGCGGGCAGTGGTAGCGGC
GGCACTCTGACGGAGGAGGAGGCGGAGTACCTCACTGCCGGCGCTCGGAG
GGTTCGACAGTTGGAGCTGGGCATTCTCAAGGGCCAGTTGAGCCGCTGGC
TGCTTCCTTTCAATACTGACACCTCTGTGGACGAGCAGCAGGCGGCAACC
CCGCGGCGGTTCCAGGAATCCTTGCTGGCGTCGTCAGCAACCTCCGGCAC
GGCGGGCAGTGGTAGCGGCGGCACTCTGACGGAGGAGGAGGCGGAGTACC
TCACTGCCGGCGCTCGGAGGGTTCGACAGTTGGTGAGATTGAAGATCGCT
GACGACAACGATCTCAACACCGCCAAGGAAGCCCTCGTTACCATGGCTGG
ATTTTTTGTGAGCATTTCCGAGGAGGCGGCGAAAAGGGGCGGCAGTGCCA
CACCCTTCGGCATCCTCCAGGCAAGTTGAGTGAGATTGAAGATCGCTGAC
GACAACGATCTCAACACCGCCAAGGAAGCCCTCGTTACCATGGCTGGATT
TTTTGTGAGCATTTCCGAGGAGGCGGCGAAAAGGGGCGGCAGTGCCACAC
CCTTCGGCATCCTCCAGGCAAGTTGA
back to top