Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 457 |
Cds size | 303 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815833.8938596-UTR-L-elsbetiae_contig2016:7489..7518 | 1622815833.8938596-UTR-L-elsbetiae_contig2016:7489..7518 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig2016 7490..7518 + |
1691683133.6303406-UTR-L-elsbetiae_contig2016:7489..7518 | 1691683133.6303406-UTR-L-elsbetiae_contig2016:7489..7518 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig2016 7490..7518 + |
1622815833.9183605-UTR-L-elsbetiae_contig2016:7821..7946 | 1622815833.9183605-UTR-L-elsbetiae_contig2016:7821..7946 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig2016 7822..7946 + |
1691683133.6482341-UTR-L-elsbetiae_contig2016:7821..7946 | 1691683133.6482341-UTR-L-elsbetiae_contig2016:7821..7946 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig2016 7822..7946 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815833.9067721-CDS-L-elsbetiae_contig2016:7518..7821 | 1622815833.9067721-CDS-L-elsbetiae_contig2016:7518..7821 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2016 7519..7821 + |
1691683133.6396449-CDS-L-elsbetiae_contig2016:7518..7821 | 1691683133.6396449-CDS-L-elsbetiae_contig2016:7518..7821 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2016 7519..7821 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2016.6064.1 >prot_L-elsbetiae_contig2016.6064.1 ID=prot_L-elsbetiae_contig2016.6064.1|Name=mRNA_L-elsbetiae_contig2016.6064.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=101bp
MHIFTFLPPEGRCIFTIFCVLSFFECTNRSPSQNMKTFSFPLRIMRILVL NKGSQKNRQKHIYASRAKPRHHHPYKEGRNTLKNTRFFSSFFLQRALSRR * back to topmRNA from alignment at L-elsbetiae_contig2016:7490..7946+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig2016.6064.1 ID=mRNA_L-elsbetiae_contig2016.6064.1|Name=mRNA_L-elsbetiae_contig2016.6064.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=457bp|location=Sequence derived from alignment at L-elsbetiae_contig2016:7490..7946+ (Laminarionema elsbetiae ELsaHSoW15) TTTTGCGATTTGCAAGTTTTTAGCTCTATATGCATATTTTTACATTTTTA
CCGCCGGAAGGGAGATGCATTTTCACGATTTTTTGTGTCCTCAGCTTTTT
CGAGTGCACGAACCGCAGTCCGTCGCAGAACATGAAAACATTTTCCTTTC
CCCTCCGTATCATGCGCATTTTGGTTCTAAACAAAGGCTCACAGAAGAAT
CGACAGAAGCATATATACGCCTCGCGTGCTAAACCACGCCATCACCACCC
CTACAAGGAAGGAAGGAACACACTCAAAAACACGCGCTTTTTCTCCAGCT
TCTTTCTACAAAGAGCTCTGTCCCGCCGTTAAACGCACTTCATGTGATAG
GTATTAACAGAAAGGGTGGATGCGACAGGCATCAAATGTCATCGACAACT
GGTCTGTCTCAGCCGCCGTGCCGCTAGATACGGCCAAGTACGATGCACGA
TCCCCCG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig2016:7490..7946+ >mRNA_L-elsbetiae_contig2016.6064.1 ID=mRNA_L-elsbetiae_contig2016.6064.1|Name=mRNA_L-elsbetiae_contig2016.6064.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=606bp|location=Sequence derived from alignment at L-elsbetiae_contig2016:7490..7946+ (Laminarionema elsbetiae ELsaHSoW15) ATGCATATTTTTACATTTTTACCGCCGGAAGGGAGATGCATTTTCACGAT TTTTTGTGTCCTCAGCTTTTTCGAGTGCACGAACCGCAGTCCGTCGCAGA ACATGAAAACATTTTCCTTTCCCCTCCGTATCATGCGCATTTTGGTTCTA AACAAAGGCTCACAGAAGAATCGACAGAAGCATATATACGCCTCGCGTGC TAAACCACGCCATCACCACCCCTACAAGGAAGGAAGGAACACACTCAAAA ACACGCGCTTTTTCTCCAGCTTCTTTCTACAAAGAGCTCTGTCCCGCCGT TAAATGCATATTTTTACATTTTTACCGCCGGAAGGGAGATGCATTTTCAC GATTTTTTGTGTCCTCAGCTTTTTCGAGTGCACGAACCGCAGTCCGTCGC AGAACATGAAAACATTTTCCTTTCCCCTCCGTATCATGCGCATTTTGGTT CTAAACAAAGGCTCACAGAAGAATCGACAGAAGCATATATACGCCTCGCG TGCTAAACCACGCCATCACCACCCCTACAAGGAAGGAAGGAACACACTCA AAAACACGCGCTTTTTCTCCAGCTTCTTTCTACAAAGAGCTCTGTCCCGC CGTTAA back to top
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