mRNA_L-elsbetiae_contig2012.6052.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2012.6052.1 vs. uniprot
Match: D7FT14_ECTSI (Putative AAA family ATP ase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT14_ECTSI) HSP 1 Score: 221 bits (562), Expect = 3.420e-67 Identity = 109/131 (83.21%), Postives = 123/131 (93.89%), Query Frame = 2 Query: 2 EEELREELRHLEKAMVDKIMRQVQQRGDPVTFDQMAGLGFAKKSVIELVCWPMKRLNIFTGLRSLPEGLLLFGPPRTGKTLIGKAIAHRPGATIFSISASSLCSKWIGEGEKMVRTLFAVAGYHQASLLAV 394 EEEL EEL+HLEKAMVDKI+++VQQ+GDPVTFDQ+AGL FAKKSVIELVCWPM+R +IFTGLRSLP+GLLLFGPP TGKTLIGKAIAH+ GAT FSISASSLCSKWIGEGEKMVRTLFAVAGYHQ +++ + Sbjct: 207 EEELPEELQHLEKAMVDKILQEVQQKGDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLFAVAGYHQPAVIFI 337
BLAST of mRNA_L-elsbetiae_contig2012.6052.1 vs. uniprot
Match: A0A6H5JMF7_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF7_9PHAE) HSP 1 Score: 221 bits (562), Expect = 4.070e-65 Identity = 109/131 (83.21%), Postives = 123/131 (93.89%), Query Frame = 2 Query: 2 EEELREELRHLEKAMVDKIMRQVQQRGDPVTFDQMAGLGFAKKSVIELVCWPMKRLNIFTGLRSLPEGLLLFGPPRTGKTLIGKAIAHRPGATIFSISASSLCSKWIGEGEKMVRTLFAVAGYHQASLLAV 394 EEEL EEL+HLEKAMVDKI+++VQQ+GDPVTFDQ+AGL FAKKSVIELVCWPM+R +IFTGLRSLP+GLLLFGPP TGKTLIGKAIAH+ GAT FSISASSLCSKWIGEGEKMVRTLFAVAGYHQ +++ + Sbjct: 477 EEELPEELQHLEKAMVDKILQEVQQKGDPVTFDQIAGLEFAKKSVIELVCWPMERPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHQSGATFFSISASSLCSKWIGEGEKMVRTLFAVAGYHQPAVIFI 607
BLAST of mRNA_L-elsbetiae_contig2012.6052.1 vs. uniprot
Match: A0A835YR71_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR71_9STRA) HSP 1 Score: 171 bits (433), Expect = 3.010e-50 Identity = 82/117 (70.09%), Postives = 98/117 (83.76%), Query Frame = 2 Query: 44 MVDKIMRQVQQRGDPVTFDQMAGLGFAKKSVIELVCWPMKRLNIFTGLRSLPEGLLLFGPPRTGKTLIGKAIAHRPGATIFSISASSLCSKWIGEGEKMVRTLFAVAGYHQASLLAV 394 M+++I +++ Q GDPVTF+ +AGL AK+ V+ELVCWPM+R IFTGLRSLP+GLLLFGPP TGKTLIGKAIAH GAT FSISASSL SKWIGEGEK+VR LFAVA Y Q S++ + Sbjct: 1 MIERITKEIMQIGDPVTFEDIAGLEGAKRLVVELVCWPMQRPEIFTGLRSLPKGLLLFGPPGTGKTLIGKAIAHESGATFFSISASSLMSKWIGEGEKLVRALFAVAAYRQPSVIFI 117
BLAST of mRNA_L-elsbetiae_contig2012.6052.1 vs. uniprot
Match: B7G2N8_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2N8_PHATC) HSP 1 Score: 169 bits (427), Expect = 3.140e-49 Identity = 83/139 (59.71%), Postives = 107/139 (76.98%), Query Frame = 2 Query: 2 EEELREELRHLEKAMVDKIMRQVQQRGDPVTFDQMAGLGFAKKSVIELVCWPMKRLNIFTGLRSLPEGLLLFGPPRTGKTLIGKAIAHRPGATIFSISASSLCSKWIGEGEKMVRTLFAVAGYHQASLLAVRRLFPPLT 418 E+EL EEL+ K +V+KI ++ GDPVTFD +AGL AK+++ E++CWPMKR ++FTGLR P GLLL+GPP TGKTLIGKAIAH GAT FSIS+SSL SKWIGEGEK+VRT+FAVA Y + +++ + + LT Sbjct: 1 EDELPEELKRFGKDLVEKIENEIMDAGDPVTFDDIAGLLDAKQTIQEVICWPMKRPDLFTGLRRAPNGLLLYGPPGTGKTLIGKAIAHESGATFFSISSSSLTSKWIGEGEKLVRTMFAVAAYREPAVVFIDEIDSLLT 139
BLAST of mRNA_L-elsbetiae_contig2012.6052.1 vs. uniprot
Match: A0A7S4K4U2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K4U2_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.200e-48 Identity = 85/136 (62.50%), Postives = 106/136 (77.94%), Query Frame = 2 Query: 11 LREELRHLEKAMVDKIMRQVQQRGDPVTFDQMAGLGFAKKSVIELVCWPMKRLNIFTGLRSLPEGLLLFGPPRTGKTLIGKAIAHRPGATIFSISASSLCSKWIGEGEKMVRTLFAVAGYHQASLLAVRRLFPPLT 418 L EEL+ L+K +++KI ++ G+PVTFD +AGL AK++V+ELVCWPMKR ++FTGLR P GLLLFGPP TGKTLIGKAIAH GAT FSIS+SSL SKWIGEGEK+VRTLF VA Y + S++ + + LT Sbjct: 92 LPEELKGLDKELIEKIQNEIVDGGEPVTFDDIAGLADAKQTVLELVCWPMKRPDLFTGLRRGPNGLLLFGPPGTGKTLIGKAIAHESGATFFSISSSSLTSKWIGEGEKLVRTLFKVAQYREPSVVFIDEIDSLLT 227
BLAST of mRNA_L-elsbetiae_contig2012.6052.1 vs. uniprot
Match: B8C5U9_THAPS (AAA domain protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5U9_THAPS) HSP 1 Score: 166 bits (420), Expect = 3.940e-48 Identity = 85/141 (60.28%), Postives = 107/141 (75.89%), Query Frame = 2 Query: 2 EEELREELRHLEKAMVDKIMRQVQQRGDPVTFDQMAGLGFAKKSVIELVCWPMKRLNIFTGLRSLPEGLLLFGPPRTGKTLIGKAIAHRPGATIFSISASSLCSKWIGEGEKMVRTLFAVAGYHQASLLAVRRLFPPLTAE 424 +EEL +ELR L+K +++KI ++ G+ VTFD +AGL AK +V E+V WPM+R +FTGLR+ P+GLLLFGPP TGKTLIGKAIAH GAT FSIS+SSL SKWIGEGEKMVRTLFAVA Y +++ + + LTA Sbjct: 1 DEELPDELRGLDKDLIEKIENEIVDSGERVTFDDIAGLQNAKSTVFEMVVWPMQRPEMFTGLRATPKGLLLFGPPGTGKTLIGKAIAHESGATFFSISSSSLTSKWIGEGEKMVRTLFAVARYRSPAVVFIDEVDSMLTAR 141
BLAST of mRNA_L-elsbetiae_contig2012.6052.1 vs. uniprot
Match: A0A421FDV3_9STRA (AAA domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A421FDV3_9STRA) HSP 1 Score: 167 bits (422), Expect = 4.670e-48 Identity = 86/144 (59.72%), Postives = 107/144 (74.31%), Query Frame = 2 Query: 2 EEELREELRHLEKAMVDKIMRQVQQRGDPVTFDQMAGLGFAKKSVIELVCWPMKRLNIFTGLRSLPEGLLLFGPPRTGKTLIGKAIAHRPGATIFSISASSLCSKWIGEGEKMVRTLFAVAGYHQASLLAVRRLFPPLTAECNN 433 EE++ L+ + +++KI ++ GDPVTFD +AGL FAKK V ELV WPM R +IFTGLRSLP+GLLLFGPP TGKTLIGKAIA++ GAT FSISASSL SKWIG+GEK+VRTLFAVA Q S++ + + LT + Sbjct: 32 EEDIDPRLKSCDPELIEKIEMEIVDNGDPVTFDDIAGLQFAKKCVNELVIWPMARPDIFTGLRSLPKGLLLFGPPGTGKTLIGKAIANQSGATFFSISASSLTSKWIGQGEKLVRTLFAVAAVKQPSVIFIDEIDSLLTQRSSE 175
BLAST of mRNA_L-elsbetiae_contig2012.6052.1 vs. uniprot
Match: A0A7S4S3S4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S3S4_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.320e-47 Identity = 83/137 (60.58%), Postives = 105/137 (76.64%), Query Frame = 2 Query: 8 ELREELRHLEKAMVDKIMRQVQQRGDPVTFDQMAGLGFAKKSVIELVCWPMKRLNIFTGLRSLPEGLLLFGPPRTGKTLIGKAIAHRPGATIFSISASSLCSKWIGEGEKMVRTLFAVAGYHQASLLAVRRLFPPLT 418 EL E LR L+K +++KI ++ G+ +TF +AGL AK++V+ELVCWPMKR ++FTGLR P GLLLFGPP TGKTLIGKAIAH GAT FSIS+SSL SKWIGEGEK+VRTLFAVA Y + +++ + + LT Sbjct: 43 ELPEALRGLDKELIEKIQNEIVDSGESITFHDIAGLADAKQTVLELVCWPMKRPDLFTGLRRGPNGLLLFGPPGTGKTLIGKAIAHESGATFFSISSSSLTSKWIGEGEKLVRTLFAVAAYREPAVVFIDEIDSLLT 179
BLAST of mRNA_L-elsbetiae_contig2012.6052.1 vs. uniprot
Match: A0A1E7F3N5_9STRA (AAA-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3N5_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.120e-47 Identity = 79/128 (61.72%), Postives = 99/128 (77.34%), Query Frame = 2 Query: 35 EKAMVDKIMRQVQQRGDPVTFDQMAGLGFAKKSVIELVCWPMKRLNIFTGLRSLPEGLLLFGPPRTGKTLIGKAIAHRPGATIFSISASSLCSKWIGEGEKMVRTLFAVAGYHQASLLAVRRLFPPLT 418 +K +V KI + GD +TFD +AGL AK +++E+VCWPMKR ++FTGLRS P GLLL+GPP TGKTLIGKAIAH GAT FSIS+SSL SKWIGEGEK+V+TLFAVAGY Q +++ + + LT Sbjct: 1 DKELVKKIQNDIMVTGDTITFDDIAGLPDAKATILEVVCWPMKRPDLFTGLRSAPNGLLLYGPPGTGKTLIGKAIAHESGATFFSISSSSLTSKWIGEGEKLVKTLFAVAGYRQPAVVFIDEIDSLLT 128
BLAST of mRNA_L-elsbetiae_contig2012.6052.1 vs. uniprot
Match: A0A1Z5KEH8_FISSO (AAA domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KEH8_FISSO) HSP 1 Score: 171 bits (433), Expect = 4.070e-47 Identity = 86/144 (59.72%), Postives = 110/144 (76.39%), Query Frame = 2 Query: 2 EEELREELRHLEKAMVDKIMRQVQQRGDPVTFDQMAGLGFAKKSVIELVCWPMKRLNIFTGLRSLPEGLLLFGPPRTGKTLIGKAIAHRPGATIFSISASSLCSKWIGEGEKMVRTLFAVAGYHQASLLAVRRLFPPLTAECNN 433 +++L EEL+ K +V+KI ++ RGDPVTFD +AGL AK++V E+VCWPMKR ++FTGLR P GLLL+GPP TGKTLIGKAIAH GAT FSIS+SSL SKWIGEGEK+VRTLFAVAG + S++ + + LT ++ Sbjct: 375 DDDLPEELKRFGKELVEKIESEIMDRGDPVTFDDIAGLLDAKQTVQEVVCWPMKRPDLFTGLRRAPNGLLLYGPPGTGKTLIGKAIAHESGATFFSISSSSLTSKWIGEGEKLVRTLFAVAGVREPSVVFIDEIDSLLTQRKSD 518 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2012.6052.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2012.6052.1 >prot_L-elsbetiae_contig2012.6052.1 ID=prot_L-elsbetiae_contig2012.6052.1|Name=mRNA_L-elsbetiae_contig2012.6052.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=134bp MVDKIMRQVQQRGDPVTFDQMAGLGFAKKSVIELVCWPMKRLNIFTGLRSback to top mRNA from alignment at L-elsbetiae_contig2012:12300..13811- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2012.6052.1 ID=mRNA_L-elsbetiae_contig2012.6052.1|Name=mRNA_L-elsbetiae_contig2012.6052.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1512bp|location=Sequence derived from alignment at L-elsbetiae_contig2012:12300..13811- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2012:12300..13811- >mRNA_L-elsbetiae_contig2012.6052.1 ID=mRNA_L-elsbetiae_contig2012.6052.1|Name=mRNA_L-elsbetiae_contig2012.6052.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=804bp|location=Sequence derived from alignment at L-elsbetiae_contig2012:12300..13811- (Laminarionema elsbetiae ELsaHSoW15)back to top |